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PI0022217 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022217
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr07:12554038..12554664
RNA-Seq ExpressionPI0022217
SyntenyPI0022217
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]1.6e-1345.13Show/hide
Query:  LCDRNFDAED-FREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFEN
        +CD     ED  +  ED +LVP  S + EVLE+ VDDPL KGK I  + A ET  PSP K+T  Q D A E ++ ++++KFI    GKPM DG ED+F+ 
Subjt:  LCDRNFDAED-FREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFEN

Query:  QTDLHECVIRHEK
        Q +  E  +R +K
Subjt:  QTDLHECVIRHEK

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]1.6e-1355.56Show/hide
Query:  GETRAPSPSKKTKDQQDIAVEENEDED-FYKFINEAIGKPMMDGLEDIFENQTDLHECVIRHEKQISDMESKIDN---HHQ
        GET AP P K+  +QQ  A  E+++ED ++KFI +  GKP+MDG +D+F+NQ DL EC  RHEKQI D+E KIDN   HHQ
Subjt:  GETRAPSPSKKTKDQQDIAVEENEDED-FYKFINEAIGKPMMDGLEDIFENQTDLHECVIRHEKQISDMESKIDN---HHQ

KAA0067817.1 hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]1.3e-1232.66Show/hide
Query:  EDFREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFENQTDLHECVI
        ++ ++ +DA LVP  S + EVLE+ +DD L KGK+I FE  G+T  PSP K+   QQD   E ++++++ KF                            
Subjt:  EDFREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFENQTDLHECVI

Query:  RHEKQISDMESKIDNHHQSQHDQLVSEIASLKEQNKA-------MVNLIKKVSLQPNRQYKSMMNYIYAVITSLVPKPAILPEFKEPLSDLELEVTPGP
                             +++ S+IA LK QN+A       M   IK+ SL    Q +++MNYI+  I SLVP P   PE +EPL+    EV PGP
Subjt:  RHEKQISDMESKIDNHHQSQHDQLVSEIASLKEQNKA-------MVNLIKKVSLQPNRQYKSMMNYIYAVITSLVPKPAILPEFKEPLSDLELEVTPGP

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]3.1e-1446.9Show/hide
Query:  LCDRNFDAED-FREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFEN
        +CD     ED  +  ED +LVP  S + EVLE+ VDDPL KGK I  + A ET  PSP K+T  Q D A E +E ++++KFI    GKPM DG ED+F+ 
Subjt:  LCDRNFDAED-FREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFEN

Query:  QTDLHECVIRHEK
        Q +  E  +R EK
Subjt:  QTDLHECVIRHEK

TYK23898.1 gag-pol [Cucumis melo var. makuwa]1.3e-1558.02Show/hide
Query:  EVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDED-FYKFINEAIGKPMMDGLEDIFENQTDLHECV
        +V EEPVDD L KGK+IA+E+ GE   PSP K+T +QQD    E++DED ++KFI++  GKPMMD LEDIF+ Q+DL EC+
Subjt:  EVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDED-FYKFINEAIGKPMMDGLEDIFENQTDLHECV

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein7.5e-1445.13Show/hide
Query:  LCDRNFDAED-FREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFEN
        +CD     ED  +  ED +LVP  S + EVLE+ VDDPL KGK I  + A ET  PSP K+T  Q D A E ++ ++++KFI    GKPM DG ED+F+ 
Subjt:  LCDRNFDAED-FREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFEN

Query:  QTDLHECVIRHEK
        Q +  E  +R +K
Subjt:  QTDLHECVIRHEK

A0A5A7U0L9 Uncharacterized protein7.5e-1455.56Show/hide
Query:  GETRAPSPSKKTKDQQDIAVEENEDED-FYKFINEAIGKPMMDGLEDIFENQTDLHECVIRHEKQISDMESKIDN---HHQ
        GET AP P K+  +QQ  A  E+++ED ++KFI +  GKP+MDG +D+F+NQ DL EC  RHEKQI D+E KIDN   HHQ
Subjt:  GETRAPSPSKKTKDQQDIAVEENEDED-FYKFINEAIGKPMMDGLEDIFENQTDLHECVIRHEKQISDMESKIDN---HHQ

A0A5A7VKU1 Uncharacterized protein6.4e-1332.66Show/hide
Query:  EDFREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFENQTDLHECVI
        ++ ++ +DA LVP  S + EVLE+ +DD L KGK+I FE  G+T  PSP K+   QQD   E ++++++ KF                            
Subjt:  EDFREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFENQTDLHECVI

Query:  RHEKQISDMESKIDNHHQSQHDQLVSEIASLKEQNKA-------MVNLIKKVSLQPNRQYKSMMNYIYAVITSLVPKPAILPEFKEPLSDLELEVTPGP
                             +++ S+IA LK QN+A       M   IK+ SL    Q +++MNYI+  I SLVP P   PE +EPL+    EV PGP
Subjt:  RHEKQISDMESKIDNHHQSQHDQLVSEIASLKEQNKA-------MVNLIKKVSLQPNRQYKSMMNYIYAVITSLVPKPAILPEFKEPLSDLELEVTPGP

A0A5D3D8Q5 Uncharacterized protein1.5e-1446.9Show/hide
Query:  LCDRNFDAED-FREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFEN
        +CD     ED  +  ED +LVP  S + EVLE+ VDDPL KGK I  + A ET  PSP K+T  Q D A E +E ++++KFI    GKPM DG ED+F+ 
Subjt:  LCDRNFDAED-FREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFEN

Query:  QTDLHECVIRHEK
        Q +  E  +R EK
Subjt:  QTDLHECVIRHEK

A0A5D3DK59 Gag-pol6.2e-1658.02Show/hide
Query:  EVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDED-FYKFINEAIGKPMMDGLEDIFENQTDLHECV
        +V EEPVDD L KGK+IA+E+ GE   PSP K+T +QQD    E++DED ++KFI++  GKPMMD LEDIF+ Q+DL EC+
Subjt:  EVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDED-FYKFINEAIGKPMMDGLEDIFENQTDLHECV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAACTCTGCGATAGAAACTTTGATGCTGAAGATTTCAGAGAGGCAGAGGACGCGACTCTAGTTCCTGATGAGTCGCAACAAACAGAAGTTCTTGAGGAGCCAGT
TGATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGGAAGCTGGTGAAACGCGAGCTCCTTCACCGTCGAAGAAAACAAAAGACCAACAAGACATTGCGGTGGAAG
AAAATGAAGATGAAGATTTCTACAAATTCATCAATGAGGCGATTGGAAAGCCAATGATGGATGGACTTGAAGACATCTTCGAAAACCAAACTGATCTGCACGAATGCGTG
ATAAGACATGAGAAGCAGATTTCGGACATGGAGTCAAAAATTGACAACCATCATCAATCCCAGCATGATCAGCTCGTGTCTGAGATTGCGAGCCTGAAGGAGCAAAATAA
GGCAATGGTAAATTTGATCAAGAAAGTTTCTTTGCAGCCTAACAGGCAATACAAATCAATGATGAACTACATTTACGCGGTCATCACAAGTCTCGTGCCCAAGCCTGCCA
TACTGCCTGAGTTCAAAGAACCCCTTTCAGACCTTGAATTGGAAGTCACGCCAGGACCTTCCGAAACGCGGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAACTCTGCGATAGAAACTTTGATGCTGAAGATTTCAGAGAGGCAGAGGACGCGACTCTAGTTCCTGATGAGTCGCAACAAACAGAAGTTCTTGAGGAGCCAGT
TGATGACCCACTCCCCAAAGGTAAAGAAATAGCCTTTGAGGAAGCTGGTGAAACGCGAGCTCCTTCACCGTCGAAGAAAACAAAAGACCAACAAGACATTGCGGTGGAAG
AAAATGAAGATGAAGATTTCTACAAATTCATCAATGAGGCGATTGGAAAGCCAATGATGGATGGACTTGAAGACATCTTCGAAAACCAAACTGATCTGCACGAATGCGTG
ATAAGACATGAGAAGCAGATTTCGGACATGGAGTCAAAAATTGACAACCATCATCAATCCCAGCATGATCAGCTCGTGTCTGAGATTGCGAGCCTGAAGGAGCAAAATAA
GGCAATGGTAAATTTGATCAAGAAAGTTTCTTTGCAGCCTAACAGGCAATACAAATCAATGATGAACTACATTTACGCGGTCATCACAAGTCTCGTGCCCAAGCCTGCCA
TACTGCCTGAGTTCAAAGAACCCCTTTCAGACCTTGAATTGGAAGTCACGCCAGGACCTTCCGAAACGCGGCTATAA
Protein sequenceShow/hide protein sequence
MQELCDRNFDAEDFREAEDATLVPDESQQTEVLEEPVDDPLPKGKEIAFEEAGETRAPSPSKKTKDQQDIAVEENEDEDFYKFINEAIGKPMMDGLEDIFENQTDLHECV
IRHEKQISDMESKIDNHHQSQHDQLVSEIASLKEQNKAMVNLIKKVSLQPNRQYKSMMNYIYAVITSLVPKPAILPEFKEPLSDLELEVTPGPSETRL