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PI0022232 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022232
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:12304483..12305734
RNA-Seq ExpressionPI0022232
SyntenyPI0022232
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-6570.74Show/hide
Query:  IATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVY
        +A G  IQQFD DVTQEYIH Y NITRLYIT+ GA     RSNN RLRD+ADD QQVLDIC NN+R+M+EIH MY++PIVP  ++RGRV+VEE +LDEVY
Subjt:  IATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD
        HNVEE+ P TQ Q+QTGYGSPM+MM  F   YCD +V T Y DSGVGPSSSYMDVGPSTSYMHGH H    GEHNEYLY+EAPT+V D
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.1e-7459.62Show/hide
Query:  MAPQLRHVNDHLLPGQAHGSR---RFIAT--------------------------------------------------------GASIQQFDEDVTQEY
        +APQL H N+HLLPG+A GSR   +F  T                                                        G SIQQFD DVTQEY
Subjt:  MAPQLRHVNDHLLPGQAHGSR---RFIAT--------------------------------------------------------GASIQQFDEDVTQEY

Query:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRP AAVGHLRSNN RLRD+ADDPQQVL+IC NN+RYM+EIH MY++ IVP PV+RGRVRVEE +LDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYL
        GSPM MM  F A Y DS+VGTGY D+G+ PSS YMDVGPS  YM  HGH RG GEHN+YL
Subjt:  GSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.9e-7577.13Show/hide
Query:  IATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRD+ADD QQ LDIC NNERYM+EIH MY++PIVP PV+RG VRVEE +LD+VY
Subjt:  IATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD
        HNVEEVP  TQTQSQTGYGSPM MM  FEA YCD +VG GY D+GVGPSSSY+DV PSTSYM  HGH RG GEHNEYLY+EAP DV D
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-7379.43Show/hide
Query:  GASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRD+ADDPQQVL+IC NN+RYM+EIH MY++ IVP PV+RGRVRVEE +LDEVYHNV
Subjt:  GASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVYHNV

Query:  EEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYL
        EEVPP TQTQSQTGYGSPM MM  F A Y DS+VGTGY D+G+ PSS YMDVGPS  YM  HGH RG GEHN+YL
Subjt:  EEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.2e-7776.96Show/hide
Query:  RRFIATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLD
        RRF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRD+ +DPQQVLDIC NNERYM++IH +Y++PIVP PV+R R RVEE +LD
Subjt:  RRFIATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLD

Query:  EVYHNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD
        EVYHNVEEVPP TQTQSQTGYGSPM MM  F A YCDS+V  GY D+ VGP SSYMDVGPSTSYM  +GHGRG GEHNEYLY+EAPTDV D
Subjt:  EVYHNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.6e-6670.74Show/hide
Query:  IATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVY
        +A G  IQQFD DVTQEYIH Y NITRLYIT+ GA     RSNN RLRD+ADD QQVLDIC NN+R+M+EIH MY++PIVP  ++RGRV+VEE +LDEVY
Subjt:  IATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD
        HNVEE+ P TQ Q+QTGYGSPM+MM  F   YCD +V T Y DSGVGPSSSYMDVGPSTSYMHGH H    GEHNEYLY+EAPT+V D
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.0e-7459.62Show/hide
Query:  MAPQLRHVNDHLLPGQAHGSR---RFIAT--------------------------------------------------------GASIQQFDEDVTQEY
        +APQL H N+HLLPG+A GSR   +F  T                                                        G SIQQFD DVTQEY
Subjt:  MAPQLRHVNDHLLPGQAHGSR---RFIAT--------------------------------------------------------GASIQQFDEDVTQEY

Query:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVYHNVEEVPPVTQTQSQTGY
        IHWYNNITRLYITRP AAVGHLRSNN RLRD+ADDPQQVL+IC NN+RYM+EIH MY++ IVP PV+RGRVRVEE +LDEVYHNVEEVPP TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVYHNVEEVPPVTQTQSQTGY

Query:  GSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYL
        GSPM MM  F A Y DS+VGTGY D+G+ PSS YMDVGPS  YM  HGH RG GEHN+YL
Subjt:  GSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.2e-7677.13Show/hide
Query:  IATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRD+ADD QQ LDIC NNERYM+EIH MY++PIVP PV+RG VRVEE +LD+VY
Subjt:  IATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD
        HNVEEVP  TQTQSQTGYGSPM MM  FEA YCD +VG GY D+GVGPSSSY+DV PSTSYM  HGH RG GEHNEYLY+EAP DV D
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-7379.43Show/hide
Query:  GASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRD+ADDPQQVL+IC NN+RYM+EIH MY++ IVP PV+RGRVRVEE +LDEVYHNV
Subjt:  GASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLDEVYHNV

Query:  EEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYL
        EEVPP TQTQSQTGYGSPM MM  F A Y DS+VGTGY D+G+ PSS YMDVGPS  YM  HGH RG GEHN+YL
Subjt:  EEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein5.8e-7876.96Show/hide
Query:  RRFIATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLD
        RRF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRD+ +DPQQVLDIC NNERYM++IH +Y++PIVP PV+R R RVEE +LD
Subjt:  RRFIATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRGRVRVEEPKLD

Query:  EVYHNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD
        EVYHNVEEVPP TQTQSQTGYGSPM MM  F A YCDS+V  GY D+ VGP SSYMDVGPSTSYM  +GHGRG GEHNEYLY+EAPTDV D
Subjt:  EVYHNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAACTAAGACATGTAAACGATCATCTACTACCTGGACAAGCACACGGTTCACGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATGAGGATGT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATATGG
CAGATGATCCGCAACAAGTCCTTGATATATGTACTAATAATGAGAGGTACATGGATGAGATACATTATATGTACAATGTACCTATTGTACCTTCACCAGTTAACAGGGGA
CGTGTTCGAGTGGAAGAACCTAAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGTCCGATGATGAT
GATGCAAGCTTTTGAAGCAGAATATTGTGATTCTAAGGTCGGTACAGGATATAATGACTCAGGAGTCGGTCCATCGTCTTCATATATGGATGTCGGACCATCAACTTCTT
ACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAACTAAGACATGTAAACGATCATCTACTACCTGGACAAGCACACGGTTCACGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATGAGGATGT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATATGG
CAGATGATCCGCAACAAGTCCTTGATATATGTACTAATAATGAGAGGTACATGGATGAGATACATTATATGTACAATGTACCTATTGTACCTTCACCAGTTAACAGGGGA
CGTGTTCGAGTGGAAGAACCTAAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGTCCGATGATGAT
GATGCAAGCTTTTGAAGCAGAATATTGTGATTCTAAGGTCGGTACAGGATATAATGACTCAGGAGTCGGTCCATCGTCTTCATATATGGATGTCGGACCATCAACTTCTT
ACATGCATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCATAA
Protein sequenceShow/hide protein sequence
MAPQLRHVNDHLLPGQAHGSRRFIATGASIQQFDEDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDMADDPQQVLDICTNNERYMDEIHYMYNVPIVPSPVNRG
RVRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGSPMMMMQAFEAEYCDSKVGTGYNDSGVGPSSSYMDVGPSTSYMHGHGHGRGRGEHNEYLYYEAPTDVPDP