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PI0022277 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022277
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZf-CCHC domain-containing protein
Genome locationchr01:20258108..20259530
RNA-Seq ExpressionPI0022277
SyntenyPI0022277
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031954.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]4.3e-0729.85Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMD-------------------------------EFTMAQ
        + R+ N P   +  +++EAE+I  L  ++STV LL V++S+ +L++K N +LE+ E+L RRMD                                    Q
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMD-------------------------------EFTMAQ

Query:  HQE------DAPHFVQDWGRRGR------RGDGAMKNG----VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEK
        H        D P F ++  + G+      + D  M +     VEE+  IR+KN +RK+TWE S+S+  N+ +K  D   PS + + K  E D QE   EK
Subjt:  HQE------DAPHFVQDWGRRGR------RGDGAMKNG----VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEK

Query:  K
        +
Subjt:  K

KAA0063032.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]2.3e-0833.14Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWGRRGRRGDGAMKNG-----
        +SR+ N P   +  +++E EEI  LS R+STV LL VEDS+ +L+ K N +++ LE LTRRMD+       E    + ++ G RG R      +G     
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWGRRGRRGDGAMKNG-----

Query:  ------------VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS
                    VEE+  +R KN+ R+  WE + S+  ++  K  +    S  +K K +  D QE   +KKS
Subjt:  ------------VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS

KAA0066202.1 Asp_protease_2 domain-containing protein [Cucumis melo var. makuwa]1.3e-0833.52Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWG-RRGRRGDGAMKN-----
        S R+   P     H+ +EAEEI   S R ST+CLL +E+S+R+L++K + ++++LE L + + E T +   E       D+  RRGR G G ++N     
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWG-RRGRRGDGAMKN-----

Query:  -------------------GVEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKK
                             EE+N IR K   RK  WE S+++  N+ S+  +   PS + K KE+E   QE V EKK
Subjt:  -------------------GVEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKK

TYK11204.1 reverse transcriptase [Cucumis melo var. makuwa]1.6e-0636.79Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEF-TMAQHQEDAPHFVQDWGRRGRRGDGAMKNGVEEL
        + R+E  P  G+  +++E EE   LS R+STVC L VEDS+ +L++K + ++++LE LTRRMD    +A+ + +A +   D  R GRR     +N   + 
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEF-TMAQHQEDAPHFVQDWGRRGRRGDGAMKNGVEEL

Query:  NEIRSK
        N+ R +
Subjt:  NEIRSK

TYK16316.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]3.9e-0832.39Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWGRRGRRGDGAMKNG-----
        +SR+ N P   +  +++E EEI  LS R+STV LL VEDS+ +L+ K N +++ LE LTRRMD+         AP  ++ + R      G  K G     
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWGRRGRRGDGAMKNG-----

Query:  ----------------VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS
                        VEE+  +R KN+ R+  WE + S+  ++  K  +    S  +K K +  D QE   +KKS
Subjt:  ----------------VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS

TrEMBL top hitse value%identityAlignment
A0A5A7SLA2 Zf-CCHC domain-containing protein2.1e-0729.85Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMD-------------------------------EFTMAQ
        + R+ N P   +  +++EAE+I  L  ++STV LL V++S+ +L++K N +LE+ E+L RRMD                                    Q
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMD-------------------------------EFTMAQ

Query:  HQE------DAPHFVQDWGRRGR------RGDGAMKNG----VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEK
        H        D P F ++  + G+      + D  M +     VEE+  IR+KN +RK+TWE S+S+  N+ +K  D   PS + + K  E D QE   EK
Subjt:  HQE------DAPHFVQDWGRRGR------RGDGAMKNG----VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEK

Query:  K
        +
Subjt:  K

A0A5A7V462 Zf-CCHC domain-containing protein1.1e-0833.14Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWGRRGRRGDGAMKNG-----
        +SR+ N P   +  +++E EEI  LS R+STV LL VEDS+ +L+ K N +++ LE LTRRMD+       E    + ++ G RG R      +G     
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWGRRGRRGDGAMKNG-----

Query:  ------------VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS
                    VEE+  +R KN+ R+  WE + S+  ++  K  +    S  +K K +  D QE   +KKS
Subjt:  ------------VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS

A0A5A7VCY1 Asp_protease_2 domain-containing protein6.4e-0933.52Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWG-RRGRRGDGAMKN-----
        S R+   P     H+ +EAEEI   S R ST+CLL +E+S+R+L++K + ++++LE L + + E T +   E       D+  RRGR G G ++N     
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWG-RRGRRGDGAMKN-----

Query:  -------------------GVEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKK
                             EE+N IR K   RK  WE S+++  N+ S+  +   PS + K KE+E   QE V EKK
Subjt:  -------------------GVEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKK

A0A5D3CJ99 Reverse transcriptase7.8e-0736.79Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEF-TMAQHQEDAPHFVQDWGRRGRRGDGAMKNGVEEL
        + R+E  P  G+  +++E EE   LS R+STVC L VEDS+ +L++K + ++++LE LTRRMD    +A+ + +A +   D  R GRR     +N   + 
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEF-TMAQHQEDAPHFVQDWGRRGRRGDGAMKNGVEEL

Query:  NEIRSK
        N+ R +
Subjt:  NEIRSK

A0A5D3D0X3 Zf-CCHC domain-containing protein1.9e-0832.39Show/hide
Query:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWGRRGRRGDGAMKNG-----
        +SR+ N P   +  +++E EEI  LS R+STV LL VEDS+ +L+ K N +++ LE LTRRMD+         AP  ++ + R      G  K G     
Subjt:  SSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWGRRGRRGDGAMKNG-----

Query:  ----------------VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS
                        VEE+  +R KN+ R+  WE + S+  ++  K  +    S  +K K +  D QE   +KKS
Subjt:  ----------------VEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAGGTTGCACCGGCGGCAACGAAACGCCAAGGAGAGGGTCGGTGGTGTACACGAGAAGCTTCAAGAAATCTTTGGACTAGTAGCCGGAAGGAAAATCAGCCGGT
TGGTGGGAATGCTCACCAAGAACAAGAGGCGGAGGAGATCCATATCCTCTCTCTAAGATCCTCTACGGTATGCTTGTTGTTCGTTGAAGATTCTGTGAGAGAATTGAATG
ACAAGAAGAACACAATACTGGAAAGTTTGGAAATACTAACAAGAAGAATGGATGAATTCACAATGGCTCAACATCAAGAAGATGCACCACATTTTGTCCAAGATTGGGGA
AGAAGAGGAAGGAGAGGCGATGGAGCAATGAAGAATGGAGTAGAGGAATTGAATGAGATACGTTCCAAAAATGCTGCAAGAAAAGCAACATGGGAAGCATCCACCAGTAG
AATGACCAATTTTAGTAGCAAGAATAAGGACTTTGTTCATCCATCACCCACAAATAAAAGCAAAGAAGTGGAGAAAGATAAGCAAGAAGCTGTGATGGAGAAAAAATCAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGAGGTTGCACCGGCGGCAACGAAACGCCAAGGAGAGGGTCGGTGGTGTACACGAGAAGCTTCAAGAAATCTTTGGACTAGTAGCCGGAAGGAAAATCAGCCGGT
TGGTGGGAATGCTCACCAAGAACAAGAGGCGGAGGAGATCCATATCCTCTCTCTAAGATCCTCTACGGTATGCTTGTTGTTCGTTGAAGATTCTGTGAGAGAATTGAATG
ACAAGAAGAACACAATACTGGAAAGTTTGGAAATACTAACAAGAAGAATGGATGAATTCACAATGGCTCAACATCAAGAAGATGCACCACATTTTGTCCAAGATTGGGGA
AGAAGAGGAAGGAGAGGCGATGGAGCAATGAAGAATGGAGTAGAGGAATTGAATGAGATACGTTCCAAAAATGCTGCAAGAAAAGCAACATGGGAAGCATCCACCAGTAG
AATGACCAATTTTAGTAGCAAGAATAAGGACTTTGTTCATCCATCACCCACAAATAAAAGCAAAGAAGTGGAGAAAGATAAGCAAGAAGCTGTGATGGAGAAAAAATCAT
AA
Protein sequenceShow/hide protein sequence
MREVAPAATKRQGEGRWCTREASRNLWTSSRKENQPVGGNAHQEQEAEEIHILSLRSSTVCLLFVEDSVRELNDKKNTILESLEILTRRMDEFTMAQHQEDAPHFVQDWG
RRGRRGDGAMKNGVEELNEIRSKNAARKATWEASTSRMTNFSSKNKDFVHPSPTNKSKEVEKDKQEAVMEKKS