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PI0022284 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022284
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr11:22494056..22494571
RNA-Seq ExpressionPI0022284
SyntenyPI0022284
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.9e-5473.58Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV
        RGR +STSSKG R SSS N  PSPMSA QY MDLGFT VTRS+ R S I IGSPTESST PRPS NL+RPSGGV QMRPPAS  SN ES TPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTR
        T +KRF+PRPEIK+YF+K + +YDPIIEPE QSLTL+E VSKIFP+ +NFL EDL+K +
Subjt:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTR

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]3.9e-5575.16Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV
        RGR +STSSKG+RLSSS N APSPMSADQYAMDLGFT VTRS+ R SGI IG PTESST PRPSANL+RP G V QM+PPAS  SN +S TPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRK
        TP+KRF+PRP+IK YF+K + +YDP IE E QSLTL+E VSKIFPE +NFL EDLRK
Subjt:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.7e-5877.5Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV
        RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR   RS GI IGSPTESST PRPS NL+RPS GV QMRPPAS  SN ES TPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRK
        TP+KRF+PRPEIK+YF+K + +YDPIIE E QSLT +ETVSKIFPE +NFLLEDLRKTRK
Subjt:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRK

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]2.3e-4772.34Show/hide
Query:  MSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAVTPEKRFIPRPEIKTYFKKQVAIYD
        MSADQYAMDLGFTTVTRS+ RSS IRI S TESST PRPSANL+RP GG  QMRPPAS  SN ES TPPTTYSQ VTP+KRF+PRPEIK+YF+K + +YD
Subjt:  MSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAVTPEKRFIPRPEIKTYFKKQVAIYD

Query:  PIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRKPFLVF
         IIEPE QS+TL++TVSKIF + +N L EDLRKTR    +F
Subjt:  PIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRKPFLVF

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]9.1e-5273.86Show/hide
Query:  RVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAVTP
        R +STSS+G+R SSS N APSPMSADQYAMDLGFTTVTRS+ RSS I+IGSPT+SST PR SANL+RPS  V QMRP AS LSN ES TPPTTYSQ +TP
Subjt:  RVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAVTP

Query:  EKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDL
        +KRF+PR EIK+YF+K V +YD IIEPE QSLTL+ETVSKIFP+ +NFL +DL
Subjt:  EKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDL

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein8.3e-5977.5Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV
        RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR   RS GI IGSPTESST PRPS NL+RPS GV QMRPPAS  SN ES TPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRK
        TP+KRF+PRPEIK+YF+K + +YDPIIE E QSLT +ETVSKIFPE +NFLLEDLRKTRK
Subjt:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRK

A0A5D3BM67 Uncharacterized protein1.1e-4772.34Show/hide
Query:  MSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAVTPEKRFIPRPEIKTYFKKQVAIYD
        MSADQYAMDLGFTTVTRS+ RSS IRI S TESST PRPSANL+RP GG  QMRPPAS  SN ES TPPTTYSQ VTP+KRF+PRPEIK+YF+K + +YD
Subjt:  MSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAVTPEKRFIPRPEIKTYFKKQVAIYD

Query:  PIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRKPFLVF
         IIEPE QS+TL++TVSKIF + +N L EDLRKTR    +F
Subjt:  PIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRKPFLVF

A0A5D3DHH1 Uncharacterized protein2.0e-4470.32Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFT-PPTTYSQA
        RGR +STSSKG+R SSS N  PS +SA QYA+DLGFT VTRS+ R  GI IGS TESST  RPSANL+RPSG V QMR  AS  SNMES T PPTTYSQA
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFT-PPTTYSQA

Query:  VTPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDE-TVSKIFPEGYNFLLE
        VTP+KRF+PRPE KTYFKK + +Y P IE E Q+LTL+E TVSKIFP+G+NFL E
Subjt:  VTPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDE-TVSKIFPEGYNFLLE

A0A5D3E4J4 Uncharacterized protein1.9e-5575.16Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV
        RGR +STSSKG+RLSSS N APSPMSADQYAMDLGFT VTRS+ R SGI IG PTESST PRPSANL+RP G V QM+PPAS  SN +S TPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRK
        TP+KRF+PRP+IK YF+K + +YDP IE E QSLTL+E VSKIFPE +NFL EDLRK
Subjt:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRK

E5GCE6 Uncharacterized protein9.4e-5573.58Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV
        RGR +STSSKG R SSS N  PSPMSA QY MDLGFT VTRS+ R S I IGSPTESST PRPS NL+RPSGGV QMRPPAS  SN ES TPPTTYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAV

Query:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTR
        T +KRF+PRPEIK+YF+K + +YDPIIEPE QSLTL+E VSKIFP+ +NFL EDL+K +
Subjt:  TPEKRFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATGAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGAAAGATCGTCCGGCATACGGATTGGATCTCCCACGGAGTCTTCCACTTCACCTAGGCCTTCGGCCAATCTTG
TCCGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTCCTGCCTCTCATTTATCAAATATGGAGTCATTTACTCCTCCTACGACATATTCTCAGGCCGTCACTCCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAAACAAGTGGCAATCTATGATCCTATAATAGAACCAGAATGTCAAAGTCTCACTCTCGATGAGACAGTTTC
AAAAATCTTCCCTGAGGGCTATAATTTCCTTCTAGAAGACCTTAGAAAAACCAGAAAACCATTCTTGGTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATGAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGAAAGATCGTCCGGCATACGGATTGGATCTCCCACGGAGTCTTCCACTTCACCTAGGCCTTCGGCCAATCTTG
TCCGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTCCTGCCTCTCATTTATCAAATATGGAGTCATTTACTCCTCCTACGACATATTCTCAGGCCGTCACTCCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAAACAAGTGGCAATCTATGATCCTATAATAGAACCAGAATGTCAAAGTCTCACTCTCGATGAGACAGTTTC
AAAAATCTTCCCTGAGGGCTATAATTTCCTTCTAGAAGACCTTAGAAAAACCAGAAAACCATTCTTGGTTTTCTAG
Protein sequenceShow/hide protein sequence
MSIVRGRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKERSSGIRIGSPTESSTSPRPSANLVRPSGGVTQMRPPASHLSNMESFTPPTTYSQAVTPEK
RFIPRPEIKTYFKKQVAIYDPIIEPECQSLTLDETVSKIFPEGYNFLLEDLRKTRKPFLVF