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PI0022307 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022307
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:4315934..4316598
RNA-Seq ExpressionPI0022307
SyntenyPI0022307
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040414.1 uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa]7.6e-6459.19Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRKEQHSPTR SKSKGPA REHVD RLTNL+QG+EDVQ +VG+LS+NF+ELV +N EIT+ AKE++ED+GR+F++EL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +          VEGELH LH+K  +F+ ++D +  ECRSK +          PT  GT   K          RNA V +NFLFGLERYF ALGV DD AR
Subjt:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+AP +LRDA QLWWRRKY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

KAA0040659.1 uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa]1.7e-6359.19Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRKEQHSPTR SKSKGPA REHVD RLTNL+QG+EDVQ +VG+LS+ F+ELV +N EIT+ AKE++ED+GR+F+KEL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +          VEGELH+LH+K  +F+ ++D +  ECRSK +          PT  GT   K          RNA V +NFLFGLERYF ALGV DD AR
Subjt:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+AP +LRDA QLWWRRKY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

KAA0042140.1 uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa]1.6e-6156.95Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRK+QHSPTR SKSKGP  REHVD RLTNL++G+EDVQ +VG+LS+NF+ELV +N EIT+ AKE++ED+GR+F+KEL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +          VEGELH+LH+K  +F+ ++D +  EC SK +          PT  GT   K          RNA V +NFLFGLERYF ALGV DD AR
Subjt:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+AP +LRD  QLWWR KY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

KAA0065760.1 polyprotein [Cucumis melo var. makuwa]2.0e-6459.64Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRKEQHSPTR SKSKGPA REHVD RLTNL+QG+EDVQ +VG+LS+NF+ELV +N EIT+ AKE++ED+GR+F++EL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  VT--------LVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +T         VEGELH LH+K  +F+ ++D +  ECRSK +          PT  GT   K          RNA V +NFLFGLERYF ALGV DD AR
Subjt:  VT--------LVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+AP +LRDA QLWWRRKY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

XP_008446938.1 PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]1.0e-6358.74Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRKEQHSPTR SKSKGPA REHVD RLTNL+QG+EDVQ +VG+LS+NF+ELVL+N EIT+ AKE++ED+GR+F+KEL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +          VEGELH LH+K  +F+ ++D +  ECRSK +      +   PT  GT   K          RN+ V +NFLF LERYF ALGV DD AR
Subjt:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+ P +LRDA QLWWRRKY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

TrEMBL top hitse value%identityAlignment
A0A1S3BG92 uncharacterized protein LOC1034894994.8e-6458.74Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRKEQHSPTR SKSKGPA REHVD RLTNL+QG+EDVQ +VG+LS+NF+ELVL+N EIT+ AKE++ED+GR+F+KEL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +          VEGELH LH+K  +F+ ++D +  ECRSK +      +   PT  GT   K          RN+ V +NFLF LERYF ALGV DD AR
Subjt:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+ P +LRDA QLWWRRKY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

A0A5A7TAA5 Uncharacterized protein3.7e-6459.19Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRKEQHSPTR SKSKGPA REHVD RLTNL+QG+EDVQ +VG+LS+NF+ELV +N EIT+ AKE++ED+GR+F++EL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +          VEGELH LH+K  +F+ ++D +  ECRSK +          PT  GT   K          RNA V +NFLFGLERYF ALGV DD AR
Subjt:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+AP +LRDA QLWWRRKY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

A0A5A7THC0 Reverse transcriptase domain-containing protein8.2e-6459.19Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRKEQHSPTR SKSKGPA REHVD RLTNL+QG+EDVQ +VG+LS+ F+ELV +N EIT+ AKE++ED+GR+F+KEL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +          VEGELH+LH+K  +F+ ++D +  ECRSK +          PT  GT   K          RNA V +NFLFGLERYF ALGV DD AR
Subjt:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+AP +LRDA QLWWRRKY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

A0A5A7VEX8 Polyprotein9.7e-6559.64Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRKEQHSPTR SKSKGPA REHVD RLTNL+QG+EDVQ +VG+LS+NF+ELV +N EIT+ AKE++ED+GR+F++EL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  VT--------LVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +T         VEGELH LH+K  +F+ ++D +  ECRSK +          PT  GT   K          RNA V +NFLFGLERYF ALGV DD AR
Subjt:  VT--------LVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+AP +LRDA QLWWRRKY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

A0A5D3D3V4 Retrotrans_gag domain-containing protein7.7e-6256.95Show/hide
Query:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE
        MS EE H S  EQVIEGPVTRGRK+QHSPTR SKSKGP  REHVD RLTNL++G+EDVQ +VG+LS+NF+ELV +N EIT+ AKE++ED+GR+F+KEL E
Subjt:  MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNE

Query:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR
        +          VEGELH+LH+K  +F+ ++D +  EC SK +          PT  GT   K          RNA V +NFLFGLERYF ALGV DD AR
Subjt:  V--------TLVEGELHELHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGAR

Query:  INNAPAYLRDATQLWWRRKYLER
        IN+AP +LRD  QLWWR KY ++
Subjt:  INNAPAYLRDATQLWWRRKYLER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTGAGGAAAGACACGTATCACTCGAGGAGCAAGTCATTGAAGGACCTGTTACCCGGGGAAGAAAGGAGCAACATTCTCCAACCCGATGCTCTAAGTCCAAAGG
ACCAGCGGCAAGAGAGCATGTCGACGCTCGCCTTACCAACCTAAAGCAGGGCTTGGAGGATGTTCAGTTCTCGGTTGGTAAGCTGAGTGACAACTTTGACGAATTAGTCT
TGCAGAATGTAGAAATCACTACTGCAGCCAAGGAGCTCGTTGAGGATCTTGGACGGTCATTCAGAAAAGAACTAAATGAAGTGACTCTTGTCGAAGGTGAGTTACATGAA
CTCCACTCTAAATACAATACTTTTGATGCCAAGATAGATACTGTTTATTCTGAATGTCGTTCCAAACGTGTCACGGGTGCAAACACTTTGATCGGTAACCAACCCACTGC
GCCAGGCACCATGCCATCAAAGTGCCTAAACCTGATATTTACAATGTGGGCAAGAAATGCCATAGTCGAAGAGAACTTCCTCTTCGGCCTAGAGCGTTACTTTGATGCCC
TAGGTGTGGTTGATGATGGAGCTCGGATTAACAACGCCCCAGCATACCTACGGGATGCTACTCAGTTATGGTGGCGGCGCAAATACCTTGAACGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCACTGAGGAAAGACACGTATCACTCGAGGAGCAAGTCATTGAAGGACCTGTTACCCGGGGAAGAAAGGAGCAACATTCTCCAACCCGATGCTCTAAGTCCAAAGG
ACCAGCGGCAAGAGAGCATGTCGACGCTCGCCTTACCAACCTAAAGCAGGGCTTGGAGGATGTTCAGTTCTCGGTTGGTAAGCTGAGTGACAACTTTGACGAATTAGTCT
TGCAGAATGTAGAAATCACTACTGCAGCCAAGGAGCTCGTTGAGGATCTTGGACGGTCATTCAGAAAAGAACTAAATGAAGTGACTCTTGTCGAAGGTGAGTTACATGAA
CTCCACTCTAAATACAATACTTTTGATGCCAAGATAGATACTGTTTATTCTGAATGTCGTTCCAAACGTGTCACGGGTGCAAACACTTTGATCGGTAACCAACCCACTGC
GCCAGGCACCATGCCATCAAAGTGCCTAAACCTGATATTTACAATGTGGGCAAGAAATGCCATAGTCGAAGAGAACTTCCTCTTCGGCCTAGAGCGTTACTTTGATGCCC
TAGGTGTGGTTGATGATGGAGCTCGGATTAACAACGCCCCAGCATACCTACGGGATGCTACTCAGTTATGGTGGCGGCGCAAATACCTTGAACGAGAGTAG
Protein sequenceShow/hide protein sequence
MSTEERHVSLEEQVIEGPVTRGRKEQHSPTRCSKSKGPAAREHVDARLTNLKQGLEDVQFSVGKLSDNFDELVLQNVEITTAAKELVEDLGRSFRKELNEVTLVEGELHE
LHSKYNTFDAKIDTVYSECRSKRVTGANTLIGNQPTAPGTMPSKCLNLIFTMWARNAIVEENFLFGLERYFDALGVVDDGARINNAPAYLRDATQLWWRRKYLERE