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PI0022316 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022316
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr01:13770139..13770591
RNA-Seq ExpressionPI0022316
SyntenyPI0022316
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]1.3e-3069.07Show/hide
Query:  NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGIS
        NN N P  Q  QE N AY+AHDLDKPI+SY +PNLY+FNPGIAYL F  N  FEIK +ML + QNA QFGGHP EDPY+HIR+FY ICASF+ML IS
Subjt:  NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]2.4e-3268.52Show/hide
Query:  NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEE
        NN   P  QAAQ  N  Y+A D D+PIRSY +PNLY+FNPGIAY  FS N RFEIK VMLQIIQNA QF  HP +DP+++IR+FYSICASFHM GIS EE
Subjt:  NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEE

Query:  LRFTLFPL
        LRFT F L
Subjt:  LRFTLFPL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.2e-2358.82Show/hide
Query:  MKNNNSNAPPPQAAQ--EPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLG
        M +N +N  P  +A   + N   +AH+LD PIR+Y + NLY+FN GIAYLVF  NA FE+K VMLQ+IQ A QF G+ GEDP+EHI+SFYSICASFHM  
Subjt:  MKNNNSNAPPPQAAQ--EPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLG

Query:  IS
         S
Subjt:  IS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.1e-3246.11Show/hide
Query:  MSDGEQPQFELDPKIERTFRYNRRRARQRQARRMKNNNSNAP--PPQAAQ---------------EPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVF
        MS+G+ P F++DP+IERTFR   R+ +QR++ +    N +A    PQA Q               + N   +AHD ++P+R Y +PNLYNF PGI    F
Subjt:  MSDGEQPQFELDPKIERTFRYNRRRARQRQARRMKNNNSNAP--PPQAAQ---------------EPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVF

Query:  SGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEELRFTLFPLTLRDEA
         GN RFE+K VMLQ++Q A QFGG  GEDP+ H++SF  IC++F M G+  + +R TLFP +LRDEA
Subjt:  SGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEELRFTLFPLTLRDEA

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]4.1e-2444.52Show/hide
Query:  MSDGEQPQFELDPKIERTF--RYNRRRARQRQARRMKNNNSNAPP-PQAAQEP--NAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVM
        MS    P+FE +P+I+ TF  R ++ RA +R+     NNN+ AP   Q    P  +  ++A D + PIR+Y APNLY+F+PGI+  +   NARFEIK VM
Subjt:  MSDGEQPQFELDPKIERTF--RYNRRRARQRQARRMKNNNSNAPP-PQAAQEP--NAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVM

Query:  LQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEELRFTLFPLTLRDEA
        +Q+IQN RQF     E+P+ H+  F  +C++F + GI+P  +R  LFP TLRD+A
Subjt:  LQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEELRFTLFPLTLRDEA

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein1.9e-1949.49Show/hide
Query:  NAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEELRFTLFPLTLRDE
        N   +AH+L+ PI  Y +P+LY FN GI Y  F GNARF++K  ML +IQ   QFGG+  EDP +HI+S Y +C+SFH+  +S E+L  T F  TL+D+
Subjt:  NAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEELRFTLFPLTLRDE

A0A5A7UDN8 Uncharacterized protein6.4e-3169.07Show/hide
Query:  NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGIS
        NN N P  Q  QE N AY+AHDLDKPI+SY +PNLY+FNPGIAYL F  N  FEIK +ML + QNA QFGGHP EDPY+HIR+FY ICASF+ML IS
Subjt:  NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 11.2e-3268.52Show/hide
Query:  NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEE
        NN   P  QAAQ  N  Y+A D D+PIRSY +PNLY+FNPGIAY  FS N RFEIK VMLQIIQNA QF  HP +DP+++IR+FYSICASFHM GIS EE
Subjt:  NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLGISPEE

Query:  LRFTLFPL
        LRFT F L
Subjt:  LRFTLFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 15.8e-2458.82Show/hide
Query:  MKNNNSNAPPPQAAQ--EPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLG
        M +N +N  P  +A   + N   +AH+LD PIR+Y + NLY+FN GIAYLVF  NA FE+K VMLQ+IQ A QF G+ GEDP+EHI+SFYSICASFHM  
Subjt:  MKNNNSNAPPPQAAQ--EPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPGEDPYEHIRSFYSICASFHMLG

Query:  IS
         S
Subjt:  IS

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.61.4e-1752.48Show/hide
Query:  MSDGEQPQFELDPKIERTFRYNRRRARQRQARRMKN--NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQI
        MS+GEQP+F +D +IER F+ NRR+ ++RQ     N  NN  AP  QA Q  N  Y+AH+ D+PIRS  +PNLY FNPGI Y  F  N RF+IK VML +
Subjt:  MSDGEQPQFELDPKIERTFRYNRRRARQRQARRMKN--NNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQI

Query:  I
        +
Subjt:  I

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACGGTGAACAGCCGCAATTCGAACTTGACCCTAAAATTGAGCGAACCTTTCGGTATAATCGGCGAAGAGCAAGGCAAAGACAAGCAAGAAGAATGAAAAACAA
TAATAGTAATGCCCCTCCGCCGCAAGCTGCCCAAGAACCAAACGCCGCCTACATGGCACATGACTTGGACAAACCAATTAGATCATATGTGGCACCCAACCTCTACAACT
TCAACCCAGGGATCGCTTACCTTGTGTTCAGCGGAAATGCTAGGTTTGAAATCAAGCGTGTAATGCTTCAAATTATTCAGAACGCCAGACAATTTGGCGGTCACCCTGGA
GAAGATCCATACGAGCACATTAGGAGTTTCTACTCTATCTGTGCTTCCTTCCATATGCTAGGCATCTCACCTGAAGAACTGAGATTCACACTCTTCCCGTTAACTCTGAG
AGACGAGGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACGGTGAACAGCCGCAATTCGAACTTGACCCTAAAATTGAGCGAACCTTTCGGTATAATCGGCGAAGAGCAAGGCAAAGACAAGCAAGAAGAATGAAAAACAA
TAATAGTAATGCCCCTCCGCCGCAAGCTGCCCAAGAACCAAACGCCGCCTACATGGCACATGACTTGGACAAACCAATTAGATCATATGTGGCACCCAACCTCTACAACT
TCAACCCAGGGATCGCTTACCTTGTGTTCAGCGGAAATGCTAGGTTTGAAATCAAGCGTGTAATGCTTCAAATTATTCAGAACGCCAGACAATTTGGCGGTCACCCTGGA
GAAGATCCATACGAGCACATTAGGAGTTTCTACTCTATCTGTGCTTCCTTCCATATGCTAGGCATCTCACCTGAAGAACTGAGATTCACACTCTTCCCGTTAACTCTGAG
AGACGAGGCGTAG
Protein sequenceShow/hide protein sequence
MSDGEQPQFELDPKIERTFRYNRRRARQRQARRMKNNNSNAPPPQAAQEPNAAYMAHDLDKPIRSYVAPNLYNFNPGIAYLVFSGNARFEIKRVMLQIIQNARQFGGHPG
EDPYEHIRSFYSICASFHMLGISPEELRFTLFPLTLRDEA