; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022341 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022341
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:13516188..13516954
RNA-Seq ExpressionPI0022341
SyntenyPI0022341
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044843.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-4746.41Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        MK+ F  +A+M GP CSGFGWNDE KCIIA++E+F++W  SHPAAKGLLNK F HYD+L Y+FGKD A G RAE F D+GSN P G++ F AD   DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAY---HLMTWRAYAPIE-------EEARRPGSTV-CGD----HSEYNGLCQRPVEGHSRVAEFT-----TSRYVRDEVVNQLQGIPELSTRE
        P +Y+ GL      LM  R     E        + +RPG  +  GD      EY        E   R+AE++      +   R E+V QL+ IPEL+  +
Subjt:  PMLYTQGLAY---HLMTWRAYAPIE-------EEARRPGSTV-CGD----HSEYNGLCQRPVEGHSRVAEFT-----TSRYVRDEVVNQLQGIPELSTRE

Query:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN
        R  LMRI++ +V+DMKAFL+V D +K  YC++IL++N
Subjt:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-5048.5Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        +K+ F  I +M GP CSGFGWNDE KCI+A++E+F++WV+SHPAAKGLLNK FPHYD+L Y+F KD A G RAE F DVGSN P G++ F A+  +DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAY---HLMTWRA-------YAPIEEEARRPGSTV-CGD----HSEY-NGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHL
          +Y++GL      LM  R        Y     + +R GST+  GD      EY N    R  E H  V +   +   R EVV QL+ IPEL+  +R  L
Subjt:  PMLYTQGLAY---HLMTWRA-------YAPIEEEARRPGSTV-CGD----HSEY-NGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHL

Query:  MRILLSSVNDMKAFLKVLDELKLEYCTLILKDN
        MRIL+ +VNDMKAFL+V D +K  YC++IL++N
Subjt:  MRILLSSVNDMKAFLKVLDELKLEYCTLILKDN

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-4947.68Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        MK+ F  +A M  P CSGFGWNDE KCIIA++E+F++WVKSHPAAKGLLNK F HYD+L Y+FGKD A G RAE F D+GSN P G++ F AD   DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAY---HLMTWRAYAPIE-------EEARRPG-STVCGD----HSEYNGLCQRPVEGHSRVAEF-----TTSRYVRDEVVNQLQGIPELSTRE
        P +Y+ GL      LM  R     E        + +RPG +T  GD      EY        E   R+AE+       +   R E+V QL+ IPEL+  +
Subjt:  PMLYTQGLAY---HLMTWRAYAPIE-------EEARRPG-STVCGD----HSEYNGLCQRPVEGHSRVAEF-----TTSRYVRDEVVNQLQGIPELSTRE

Query:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN
        R  LMRI++ +V+DMKAFLKV D +K  YC++IL++N
Subjt:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN

KAA0065737.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-4745.57Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        MK+ F  +A+M GP CSGFGWNDE KCI+A++E+F++W  SHPAAKGLLNK F HYD+L Y+FGKD A G RAE F D+GSN P G++ F AD   DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAYH----------LMTWRAYAPIEEEARRPG-STVCGD----HSEYNGLCQRPVEGHSRVAEF-----TTSRYVRDEVVNQLQGIPELSTRE
        P +Y+ GL              ++ R     E + +RPG +T  GD      EY        E   R+AE+       +   R ++V QL+ IPEL+  +
Subjt:  PMLYTQGLAYH----------LMTWRAYAPIEEEARRPG-STVCGD----HSEYNGLCQRPVEGHSRVAEF-----TTSRYVRDEVVNQLQGIPELSTRE

Query:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN
        R  LMRIL+ +V+DMKAFL+V D +K  YC++IL++N
Subjt:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN

TYK05687.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-4747Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        +K+ F  IA+M GP CSGFGWNDE KCI+ ++E+F++WVKSHP AKGLLNK FPHYD+L Y+FGKD AMG R + F DVGSN    +E F AD  +DT  
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAYHLMTWRAYAPIEEEARRPGSTVCGDHSEYNGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHLMRILLSSVNDMKAFLK
          +Y+QGL+  L         +E      + V  D S+                        R EVV QL+ IPEL+  +R HLMRIL+ +V+DMKAFL+
Subjt:  PMLYTQGLAYHLMTWRAYAPIEEEARRPGSTVCGDHSEYNGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHLMRILLSSVNDMKAFLK

Query:  VLDELKLEYCTLILKDN
        V D +K  YC+ IL++N
Subjt:  VLDELKLEYCTLILKDN

TrEMBL top hitse value%identityAlignment
A0A5A7TMW5 Retrotransposon protein8.4e-4846.41Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        MK+ F  +A+M GP CSGFGWNDE KCIIA++E+F++W  SHPAAKGLLNK F HYD+L Y+FGKD A G RAE F D+GSN P G++ F AD   DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAY---HLMTWRAYAPIE-------EEARRPGSTV-CGD----HSEYNGLCQRPVEGHSRVAEFT-----TSRYVRDEVVNQLQGIPELSTRE
        P +Y+ GL      LM  R     E        + +RPG  +  GD      EY        E   R+AE++      +   R E+V QL+ IPEL+  +
Subjt:  PMLYTQGLAY---HLMTWRAYAPIE-------EEARRPGSTV-CGD----HSEYNGLCQRPVEGHSRVAEFT-----TSRYVRDEVVNQLQGIPELSTRE

Query:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN
        R  LMRI++ +V+DMKAFL+V D +K  YC++IL++N
Subjt:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN

A0A5A7TZA5 Retrotransposon protein1.1e-5048.5Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        +K+ F  I +M GP CSGFGWNDE KCI+A++E+F++WV+SHPAAKGLLNK FPHYD+L Y+F KD A G RAE F DVGSN P G++ F A+  +DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAY---HLMTWRA-------YAPIEEEARRPGSTV-CGD----HSEY-NGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHL
          +Y++GL      LM  R        Y     + +R GST+  GD      EY N    R  E H  V +   +   R EVV QL+ IPEL+  +R  L
Subjt:  PMLYTQGLAY---HLMTWRA-------YAPIEEEARRPGSTV-CGD----HSEY-NGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHL

Query:  MRILLSSVNDMKAFLKVLDELKLEYCTLILKDN
        MRIL+ +VNDMKAFL+V D +K  YC++IL++N
Subjt:  MRILLSSVNDMKAFLKVLDELKLEYCTLILKDN

A0A5A7U4M2 Retrotransposon protein8.9e-5047.68Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        MK+ F  +A M  P CSGFGWNDE KCIIA++E+F++WVKSHPAAKGLLNK F HYD+L Y+FGKD A G RAE F D+GSN P G++ F AD   DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAY---HLMTWRAYAPIE-------EEARRPG-STVCGD----HSEYNGLCQRPVEGHSRVAEF-----TTSRYVRDEVVNQLQGIPELSTRE
        P +Y+ GL      LM  R     E        + +RPG +T  GD      EY        E   R+AE+       +   R E+V QL+ IPEL+  +
Subjt:  PMLYTQGLAY---HLMTWRAYAPIE-------EEARRPG-STVCGD----HSEYNGLCQRPVEGHSRVAEF-----TTSRYVRDEVVNQLQGIPELSTRE

Query:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN
        R  LMRI++ +V+DMKAFLKV D +K  YC++IL++N
Subjt:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN

A0A5A7VF53 Retrotransposon protein4.9e-4845.57Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        MK+ F  +A+M GP CSGFGWNDE KCI+A++E+F++W  SHPAAKGLLNK F HYD+L Y+FGKD A G RAE F D+GSN P G++ F AD   DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAYH----------LMTWRAYAPIEEEARRPG-STVCGD----HSEYNGLCQRPVEGHSRVAEF-----TTSRYVRDEVVNQLQGIPELSTRE
        P +Y+ GL              ++ R     E + +RPG +T  GD      EY        E   R+AE+       +   R ++V QL+ IPEL+  +
Subjt:  PMLYTQGLAYH----------LMTWRAYAPIEEEARRPG-STVCGD----HSEYNGLCQRPVEGHSRVAEF-----TTSRYVRDEVVNQLQGIPELSTRE

Query:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN
        R  LMRIL+ +V+DMKAFL+V D +K  YC++IL++N
Subjt:  RVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDN

A0A5D3CHG6 Retrotransposon protein2.4e-4745.87Show/hide
Query:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI
        +K+ F  +A+M GP C GFGWNDE KCI+A++E+F++WVKSHP AKGLLNK FPHYD+L Y+FGKD  M  R E F +VGSN   G+E F AD  +DT+ 
Subjt:  MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEI

Query:  PMLYTQGLAYHL-MTWRAYAPIEEEARRPGSTVCGDHSEYNGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHLMRILLSSVNDMKAFL
         ++Y+QGL   L        P   E R   S   G   +  G                 +   R +VV QL+ IPEL+  +R HLMRIL+ +V++MKAFL
Subjt:  PMLYTQGLAYHL-MTWRAYAPIEEEARRPGSTVCGDHSEYNGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHLMRILLSSVNDMKAFL

Query:  KVLDELKLEYCTLILKDN
         V D +K  YC +IL++N
Subjt:  KVLDELKLEYCTLILKDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein2.5e-0433.96Show/hide
Query:  GFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMG
        GF W+   + +I    L+  ++K+HP A+    KP  ++ DLC I+G   A G
Subjt:  GFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMG

AT2G24960.2 unknown protein1.6e-0633.33Show/hide
Query:  SGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMG
        +GF W+     +IA  +++  ++++HP A+    K  P Y +LC+IFGK+ + G
Subjt:  SGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMG

AT4G02210.1 unknown protein7.8e-0631.91Show/hide
Query:  GFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFG
        GF W++E + + A   ++++++K+H  A+  + +P P+Y DLC + G
Subjt:  GFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFG

AT4G02210.2 unknown protein7.8e-0631.91Show/hide
Query:  GFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFG
        GF W++E + + A   ++++++K+H  A+  + +P P+Y DLC + G
Subjt:  GFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAACATTTCAGGTCATTGCACAAATGCACGGGCCATTGTGTAGTGGGTTCGGTTGGAACGATGAAGTGAAATGCATCATCGCTAAGAGAGAGTTGTTCGAAAA
TTGGGTTAAGAGTCACCCCGCTGCGAAGGGCCTCCTAAACAAGCCATTTCCCCATTACGATGACCTATGCTACATATTTGGGAAGGATTGTGCGATGGGAGCTCGCGCGG
AGATATTCGTCGACGTCGGGTCGAATGTGCCTGGAGGGTTCGAGGGATTTCCCGCTGATTATGGAAACGATACAGAGATCCCTATGTTGTACACTCAGGGACTAGCATAT
CACCTGATGACATGGCGGGCTTACGCCCCAATCGAAGAGGAAGCGAGGAGGCCAGGCAGCACAGTCTGTGGAGATCATTCAGAATACAATGGACTTTGCCAACGACCAGT
TGAAGGGCATAGCAGAGTGGCCGAATTTACAACTTCAAGATACGTTCGTGACGAAGTTGTTAACCAGCTGCAGGGCATCCCCGAACTAAGTACCCGCGAAAGGGTGCACC
TTATGCGGATACTACTGAGCAGTGTGAACGACATGAAAGCATTCTTGAAGGTACTCGATGAGCTTAAGCTGGAATACTGCACGCTCATTCTCAAAGACAACGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAACATTTCAGGTCATTGCACAAATGCACGGGCCATTGTGTAGTGGGTTCGGTTGGAACGATGAAGTGAAATGCATCATCGCTAAGAGAGAGTTGTTCGAAAA
TTGGGTTAAGAGTCACCCCGCTGCGAAGGGCCTCCTAAACAAGCCATTTCCCCATTACGATGACCTATGCTACATATTTGGGAAGGATTGTGCGATGGGAGCTCGCGCGG
AGATATTCGTCGACGTCGGGTCGAATGTGCCTGGAGGGTTCGAGGGATTTCCCGCTGATTATGGAAACGATACAGAGATCCCTATGTTGTACACTCAGGGACTAGCATAT
CACCTGATGACATGGCGGGCTTACGCCCCAATCGAAGAGGAAGCGAGGAGGCCAGGCAGCACAGTCTGTGGAGATCATTCAGAATACAATGGACTTTGCCAACGACCAGT
TGAAGGGCATAGCAGAGTGGCCGAATTTACAACTTCAAGATACGTTCGTGACGAAGTTGTTAACCAGCTGCAGGGCATCCCCGAACTAAGTACCCGCGAAAGGGTGCACC
TTATGCGGATACTACTGAGCAGTGTGAACGACATGAAAGCATTCTTGAAGGTACTCGATGAGCTTAAGCTGGAATACTGCACGCTCATTCTCAAAGACAACGTTTGA
Protein sequenceShow/hide protein sequence
MKKTFQVIAQMHGPLCSGFGWNDEVKCIIAKRELFENWVKSHPAAKGLLNKPFPHYDDLCYIFGKDCAMGARAEIFVDVGSNVPGGFEGFPADYGNDTEIPMLYTQGLAY
HLMTWRAYAPIEEEARRPGSTVCGDHSEYNGLCQRPVEGHSRVAEFTTSRYVRDEVVNQLQGIPELSTRERVHLMRILLSSVNDMKAFLKVLDELKLEYCTLILKDNV