; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022349 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022349
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionexosome complex component RRP41 homolog
Genome locationchr10:16821536..16825108
RNA-Seq ExpressionPI0022349
SyntenyPI0022349
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0071051 - polyadenylation-dependent snoRNA 3'-end processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0004527 - exonuclease activity (molecular function)
GO:0009022 - tRNA nucleotidyltransferase activity (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143616.1 exosome complex component RRP41 homolog [Cucumis sativus]1.3e-12899.17Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQN+SQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG
        LPIDVFEDVMELAIEGCKAIATYIR VMLEHTKQLEYHRDG
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG

XP_008445878.1 PREDICTED: exosome complex component RRP41 homolog [Cucumis melo]4.9e-12898.76Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVTPEGLR DGRRPRELREMRAEIGAVSKANGSA+FEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG
        LPIDVFEDVMELAIEGCKAIATYIRKVML+HTKQLEYHRDG
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG

XP_022157614.1 exosome complex component RRP41 homolog [Momordica charantia]1.1e-11690.38Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFV+PEGLR DGRRP E+R++R EIGAVSKA+GSAVFEMGNTKV+AAVYGPREVQNRSQQ+S+QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIF+QVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNS  LLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR
        LPID+FE+VM+LAIEGCKA+A+YIR+VMLE+TK+LEY R
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR

XP_022941604.1 exosome complex component RRP41 homolog [Cucurbita moschata]2.3e-11791.21Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFV+PEGLR DGRRP E+R++RAEIGAVSKA+GSA+FEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNS  LLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR
        LP+D+FE+VM+LAIEGCKA+A YIR+VMLE TK+LEY R
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR

XP_038891797.1 exosome complex component RRP41 homolog [Benincasa hispida]3.1e-12294.19Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFV+PEGLR DGRRP E+R++RAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNS  LLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG
        LPIDVFE+VM+LAIEGCKAIA+YIR+VML++TKQLEYHRDG
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG

TrEMBL top hitse value%identityAlignment
A0A0A0KNI9 Uncharacterized protein6.2e-12999.17Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQN+SQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG
        LPIDVFEDVMELAIEGCKAIATYIR VMLEHTKQLEYHRDG
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG

A0A1S3BDQ6 exosome complex component RRP41 homolog2.4e-12898.76Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVTPEGLR DGRRPRELREMRAEIGAVSKANGSA+FEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG
        LPIDVFEDVMELAIEGCKAIATYIRKVML+HTKQLEYHRDG
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG

A0A6J1DWZ5 exosome complex component RRP41 homolog5.5e-11790.38Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFV+PEGLR DGRRP E+R++R EIGAVSKA+GSAVFEMGNTKV+AAVYGPREVQNRSQQ+S+QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIF+QVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNS  LLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR
        LPID+FE+VM+LAIEGCKA+A+YIR+VMLE+TK+LEY R
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR

A0A6J1FNX1 exosome complex component RRP41 homolog1.1e-11791.21Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFV+PEGLR DGRRP E+R++RAEIGAVSKA+GSA+FEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNS  LLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR
        LP+D+FE+VM+LAIEGCKA+A YIR+VMLE TK+LEY R
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR

A0A6J1JKC7 exosome complex component RRP41 homolog1.1e-11791.21Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFV+PEGLR DGRRP E+R++RAEIGAVSKA+GSA+FEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNS  LLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR
        LP+D+FE+VM+LAIEGCKA+A YIR+VMLE TK+LEY R
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR

SwissProt top hitse value%identityAlignment
Q5JIR6 Exosome complex component Rrp417.0e-5346.06Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        ++ +   G R DGR+  ELR ++ E+G +  A+GSA  E G  KVLAAVYGPRE+  +  Q  ++A++R  Y MA FS  +R +KP  DRRS EIS VIR
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
          +E  +L H+ PR+ ID+F+++LQAD GTR A I AA+LALADAGIPM+D+V +C+AG ++   +LDLN  ED+ G  DV V  +P  + +TLLQMD  
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG
        L  D F + + LAI+G KA+    R+ + E   ++    +G
Subjt:  LPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHRDG

Q7YRA3 Exosome complex component RRP411.2e-6351.06Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E ++ +G R DGRR  ELR+++A +G  ++A+GSA  E GNTK LA VYGP E++ +R++ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++  AL DL++VE++AGGP + +  LP   ++ LL+MDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQ
        +L  D  E V+E A    + + T + +V+ +H ++
Subjt:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQ

Q921I9 Exosome complex component RRP411.2e-6351.06Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E ++ +G R DGRR  ELR+++A +G  ++A+GSA  E GNTK LA VYGP E++ +RS+ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++  AL DL++VE++AGGP + +  LP   ++ LL+MD+
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQ
        +L  D  E V+E A +  + + T +  V+ +H ++
Subjt:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQ

Q9NPD3 Exosome complex component RRP416.8e-6451.06Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E ++ +G R DGRR  ELR+++A +G  ++A+GSA  E GNTK LA VYGP E++ +R++ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQ-NRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT +AC+NAATLA+ DAGIPMRD V +CSAG+++  AL DL++VE++AGGP + +  LP   ++ LL+MDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQ
        +L  D  E V+E A +  + + T + +V+ +H ++
Subjt:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQ

Q9SP08 Exosome complex component RRP41 homolog2.7e-9777.5Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V PEGLR DGRR  E+R++ AE+G VSKA+GSAVFEMGNTKV+AAVYGPRE+QN+SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRSACINAATLALADAGIPMRD+  SCSAGYLNS  LLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR
        KLP++ FE V  LA EGCKAIA  IR+V+ E+TKQLEY R
Subjt:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR

Arabidopsis top hitse value%identityAlignment
AT3G46210.1 Ribosomal protein S5 domain 2-like superfamily protein1.3e-1429.79Show/hide
Query:  RQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL
        R+DGR P +LR +      + + +GSA +  G+TKVLAAVYGP+    +++              A F    + +  +  +   E  +++++T++  C+L
Subjt:  RQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL

Query:  THLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDI-VTSCSAGYLNSNALLDLNYVEDSAGG-------PDVTVGFLPK
        T + P +   + +QV+  DG      INAA  AL DAGIPM+ + V  C     N   +LD N +E+           P+ T+  LP+
Subjt:  THLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDI-VTSCSAGYLNSNALLDLNYVEDSAGG-------PDVTVGFLPK

AT3G46210.2 Ribosomal protein S5 domain 2-like superfamily protein1.3e-1429.79Show/hide
Query:  RQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL
        R+DGR P +LR +      + + +GSA +  G+TKVLAAVYGP+    +++              A F    + +  +  +   E  +++++T++  C+L
Subjt:  RQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL

Query:  THLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDI-VTSCSAGYLNSNALLDLNYVEDSAGG-------PDVTVGFLPK
        T + P +   + +QV+  DG      INAA  AL DAGIPM+ + V  C     N   +LD N +E+           P+ T+  LP+
Subjt:  THLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDI-VTSCSAGYLNSNALLDLNYVEDSAGG-------PDVTVGFLPK

AT3G61620.1 3'-5'-exoribonuclease family protein1.9e-9877.5Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V PEGLR DGRR  E+R++ AE+G VSKA+GSAVFEMGNTKV+AAVYGPRE+QN+SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRSACINAATLALADAGIPMRD+  SCSAGYLNS  LLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR
        KLP++ FE V  LA EGCKAIA  IR+V+ E+TKQLEY R
Subjt:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR

AT3G61620.2 3'-5'-exoribonuclease family protein1.9e-9877.5Show/hide
Query:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V PEGLR DGRR  E+R++ AE+G VSKA+GSAVFEMGNTKV+AAVYGPRE+QN+SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRSACINAATLALADAGIPMRD+  SCSAGYLNS  LLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR
        KLP++ FE V  LA EGCKAIA  IR+V+ E+TKQLEY R
Subjt:  KLPIDVFEDVMELAIEGCKAIATYIRKVMLEHTKQLEYHR

AT4G27490.1 3'-5'-exoribonuclease family protein2.1e-2028.24Show/hide
Query:  RQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILT
        R DGR   + R    + GAVS A+GSA  E GNTKV+ +V+GPRE   ++   S+   + C  +  NF++    +         E S ++ + +E  I+ 
Subjt:  RQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILT

Query:  HLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDVFEDV
           P++ +D+F  VL++ G   S  I+ A+LALADAGI M D++T+ S   +  + ++D    E+        +  +P   ++T L +  +       + 
Subjt:  HLMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDVFEDV

Query:  MELAIEGCKAIATYIR
        M+L ++    +   +R
Subjt:  MELAIEGCKAIATYIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCGTGACCCCCGAAGGACTTCGCCAAGACGGTCGCCGTCCCAGGGAGCTGAGGGAAATGCGAGCGGAAATTGGGGCTGTTTCTAAAGCCAATGGGTCTGCTGT
TTTTGAGATGGGTAACACCAAAGTTCTTGCTGCTGTATATGGTCCAAGAGAGGTCCAGAATAGGAGTCAACAAATGAGCAACCAAGCACTGGTGCGTTGTGAGTACACCA
TGGCTAATTTCAGTACTGGAGATCGCATGAGAAAGCCCAAGGGAGACAGGCGATCCACAGAGATATCTTTAGTTATTCGCCAGACAATGGAGGAATGCATTCTAACACAT
TTAATGCCTCGGTCTCAGATAGATATCTTTGTCCAAGTTCTTCAAGCAGATGGAGGTACCAGATCAGCATGCATAAATGCTGCAACTTTGGCGCTTGCTGATGCTGGAAT
TCCAATGCGTGATATTGTTACTTCCTGCAGTGCTGGATACCTTAATAGCAATGCTTTGCTTGATTTGAATTATGTAGAGGATAGTGCTGGTGGCCCTGATGTTACTGTAG
GCTTTCTACCTAAGTTGGATAAAGTTACTCTTCTACAGATGGATGCTAAATTACCTATTGATGTATTTGAGGATGTGATGGAACTTGCAATTGAAGGCTGCAAAGCCATA
GCTACTTACATTCGAAAAGTAATGTTAGAACATACGAAGCAACTCGAATATCATCGCGATGGATAG
mRNA sequenceShow/hide mRNA sequence
CTTCAACCTTCCTATAGTTCCTTTTTTCTTAAACCCTATTTCACTACCTCCCAGACGCTGCACTCCGCCTCGCCACCCCTCTGCCCACCGCCGCCGCCGTACACTACACT
CTCTGCTCCCACAGTTCAGCCTTTCTACAAACTTGCCGCTGCACCCTCCCTTTCGCACTCTCTCCTCTCTCCGAGCAATCAAAGTTGCCATCTTTCTTAGAAACACAGTG
GTTCAGCCCCTAACCCGAACTCACCTATACCTTTCGGCCGAAAATTGCAACATTCTGTTCGCCCATGGAGTTCGTGACCCCCGAAGGACTTCGCCAAGACGGTCGCCGTC
CCAGGGAGCTGAGGGAAATGCGAGCGGAAATTGGGGCTGTTTCTAAAGCCAATGGGTCTGCTGTTTTTGAGATGGGTAACACCAAAGTTCTTGCTGCTGTATATGGTCCA
AGAGAGGTCCAGAATAGGAGTCAACAAATGAGCAACCAAGCACTGGTGCGTTGTGAGTACACCATGGCTAATTTCAGTACTGGAGATCGCATGAGAAAGCCCAAGGGAGA
CAGGCGATCCACAGAGATATCTTTAGTTATTCGCCAGACAATGGAGGAATGCATTCTAACACATTTAATGCCTCGGTCTCAGATAGATATCTTTGTCCAAGTTCTTCAAG
CAGATGGAGGTACCAGATCAGCATGCATAAATGCTGCAACTTTGGCGCTTGCTGATGCTGGAATTCCAATGCGTGATATTGTTACTTCCTGCAGTGCTGGATACCTTAAT
AGCAATGCTTTGCTTGATTTGAATTATGTAGAGGATAGTGCTGGTGGCCCTGATGTTACTGTAGGCTTTCTACCTAAGTTGGATAAAGTTACTCTTCTACAGATGGATGC
TAAATTACCTATTGATGTATTTGAGGATGTGATGGAACTTGCAATTGAAGGCTGCAAAGCCATAGCTACTTACATTCGAAAAGTAATGTTAGAACATACGAAGCAACTCG
AATATCATCGCGATGGATAGCCAAAAACTGTTTTGAGCTTCTTTACAAAGGAAAGAGATTTCAATTGTTTTAAGAGATAATGAAGTTATTGATGCCTCTTTTTCCCACCT
CTCAGTTGTGAATTAATACATCTCTAGCCCTAATTAATGTACAGAATGTGTTTTTCTTTCCCTTATATTTCACCAGATTTTCTCTCTGATTAGCATGATAGAAAGTTGAA
TTCATATAATCTATAACTCATTTTGTTTTGTTTATAAATGTCATATCAAACCCAAATTTGTATAAAAAGTGGCCTACCAAGCAATATTTCAAGTGCGATTGATTAA
Protein sequenceShow/hide protein sequence
MEFVTPEGLRQDGRRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNRSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTH
LMPRSQIDIFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSNALLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDVFEDVMELAIEGCKAI
ATYIRKVMLEHTKQLEYHRDG