CuGenDBv2

Gene ID	PI0022366
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein FAR1-RELATED SEQUENCE 4-like
Genome location	chr02:12314907..12315846
RNA-Seq Expression	PI0022366
Synteny	PI0022366
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	IPR004332 - Transposase, MuDR, plant IPR018289 - MULE transposase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

1.7e-70

53.41

Show/hide

Query:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT
        +I     +  D  +  +S   DLKEK +F SKE+L K F  IA+KNNF+F+T  SN +++EF+C Q+ C WYVRASRYK  ELW LRKYI++ +CS+N  
Subjt:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT

Query:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI
        Q+ H +         + + F S DRS P  I+    T LGVN+SY KAWRAKE ++  L G+A E Y+LI + F KL E NP      E D  G FK+C 
Subjt:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI

Query:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
        MA GA IE WKYCRP ISVDGTFLK K+G  LL  S+ +GNNQIFPLAF+IVDSENDASW WFF
Subjt:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

1.7e-70

53.41

Show/hide

Query:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT
        +I     +  D  +  +S   DLKEK +F SKE+L K F  IA+KNNF+F+T  SN +++EF+C Q+ C WYVRASRYK  ELW LRKYI++ +CS+N  
Subjt:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT

Query:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI
        Q+ H +         + + F S DRS P  I+    T LGVN+SY KAWRAKE ++  L G+A E Y+LI + F KL E NP      E D  G FK+C 
Subjt:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI

Query:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
        MA GA IE WKYCRP ISVDGTFLK K+G  LL  S+ +GNNQIFPLAF+IVDSENDASW WFF
Subjt:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]

4.4e-71

53.68

Show/hide

Query:  LLNIGSSSSVSND-EVIREI-----SYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISD
        L ++ SSSS+ +D +++ +I     S   DLKEK +F SKE+L K F  IA+KNNF+F+T  SN +++EF+C Q+ C WYVRASRYK  ELW LRKYI++
Subjt:  LLNIGSSSSVSND-EVIREI-----SYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISD

Query:  CDCSLNTTQSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDD
         +CS+N  Q+ H +         + + F S DRS P  I+    T LGVN+SY KAWRAKE ++  L G+A E Y+LI + F KL E NP      E D 
Subjt:  CDCSLNTTQSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDD

Query:  SGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
         G FK+C MA GA IE WKYCRP ISVDGTFLK K+G  LL  S+ +GNNQIFPLAF+IVDSENDASW WFF
Subjt:  SGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]

3.4e-87

61.19

Show/hide

Query:  LLNIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLN
        LL +GSSS  SND+VI+ + ++GDLKEK +F SKE+L KCF +IAV  NFQFRTT SN ++ E +CLQEGC+WYVRAS YKKSELWMLRKYISD +C +N
Subjt:  LLNIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLN

Query:  TTQSCHSKLLQ-----------RFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRF
        TTQSCH +              RF+STD S+P+ IV+KA T LGVNISYQKAWR KEHI++ L GDA + YSLI   F +L E NP      ++D++G F
Subjt:  TTQSCHSKLLQ-----------RFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRF

Query:  KFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
        K C M  GASIE W+Y  P ISVDGTFLK KFG  LL  S+ +GNN IFPLAF IVDSEND SW WFF
Subjt:  KFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]

1.5e-74

57.65

Show/hide

Query:  EVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTTQSCHSKLLQ--
        +VI +I    DLKEK +F SKE+L KCF  IAVK NF+F+T  SN R++EFRC+Q+GC+WYVRASRYK S+LWMLRK+I   DCS+N  Q+ H +     
Subjt:  EVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTTQSCHSKLLQ--

Query:  ---------RFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCIMAFGASIER
                 R  S+D   PK IV+K    LGVNISY KAWRAKEHI+K LKGDA E Y+LI     KL E NP      E D  G FK+C MA G+SIE 
Subjt:  ---------RFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCIMAFGASIER

Query:  WKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
        WK+CRP I VDGTFLKCK+   LL  S+ +GNN+ FPLAF+IVDSENDASW WFF
Subjt:  WKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like

8.1e-71

53.41

Show/hide

Query:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT
        +I     +  D  +  +S   DLKEK +F SKE+L K F  IA+KNNF+F+T  SN +++EF+C Q+ C WYVRASRYK  ELW LRKYI++ +CS+N  
Subjt:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT

Query:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI
        Q+ H +         + + F S DRS P  I+    T LGVN+SY KAWRAKE ++  L G+A E Y+LI + F KL E NP      E D  G FK+C 
Subjt:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI

Query:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
        MA GA IE WKYCRP ISVDGTFLK K+G  LL  S+ +GNNQIFPLAF+IVDSENDASW WFF
Subjt:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

A0A5A7UZ18 Protein FAR1-RELATED SEQUENCE 4-like

1.8e-70

53.03

Show/hide

Query:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT
        +I     +  D  +  +S   DLKEK +F +KE+L K F  IA+KNNF+F+T  SN +++EF+C Q+ C WYVRASRYK  ELW LRKYI++ +CS+N  
Subjt:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT

Query:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI
        Q+ H +         + + F S DRS P  I+    T LGVN+SY KAWRAKE ++  L G+A E Y+LI + F KL E NP      E D  G FK+C 
Subjt:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI

Query:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
        MA GA IE WKYCRP ISVDGTFLK K+G  LL  S+ +GNNQIFPLAF+IVDSENDASW WFF
Subjt:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like

9.0e-70

52.57

Show/hide

Query:  LLNIGSSSSVSND-EVIREI-----SYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISD
        L ++  SSS+ +D +++ +I     S   DLKE  +F SKE+L K F  IA+KNNF+F+T  SN +++EF+C Q+ C WYVRASRYK  +LW LRKYI++
Subjt:  LLNIGSSSSVSND-EVIREI-----SYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISD

Query:  CDCSLNTTQSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDD
         +CS+N  Q+ H +         + + F S DRS P  I+    T LGVN+SY KAWRAKE ++  L G+A E Y+LI + F KL E NP      E D 
Subjt:  CDCSLNTTQSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDD

Query:  SGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
         G FK+C MA GA IE WKYCRP ISVDGTFLK K+G  LL  S+ +GNNQIFPLAF+IVDSENDASW WFF
Subjt:  SGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like

8.1e-71

53.41

Show/hide

Query:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT
        +I     +  D  +  +S   DLKEK +F SKE+L K F  IA+KNNF+F+T  SN +++EF+C Q+ C WYVRASRYK  ELW LRKYI++ +CS+N  
Subjt:  NIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTT

Query:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI
        Q+ H +         + + F S DRS P  I+    T LGVN+SY KAWRAKE ++  L G+A E Y+LI + F KL E NP      E D  G FK+C 
Subjt:  QSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDDSGRFKFCI

Query:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
        MA GA IE WKYCRP ISVDGTFLK K+G  LL  S+ +GNNQIFPLAF+IVDSENDASW WFF
Subjt:  MAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

A0A5D3DJR8 MuDR family transposase

2.1e-71

53.68

Show/hide

Query:  LLNIGSSSSVSND-EVIREI-----SYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISD
        L ++ SSSS+ +D +++ +I     S   DLKEK +F SKE+L K F  IA+KNNF+F+T  SN +++EF+C Q+ C WYVRASRYK  ELW LRKYI++
Subjt:  LLNIGSSSSVSND-EVIREI-----SYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISD

Query:  CDCSLNTTQSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDD
         +CS+N  Q+ H +         + + F S DRS P  I+    T LGVN+SY KAWRAKE ++  L G+A E Y+LI + F KL E NP      E D 
Subjt:  CDCSLNTTQSCHSK---------LLQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNP------EMDD

Query:  SGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF
         G FK+C MA GA IE WKYCRP ISVDGTFLK K+G  LL  S+ +GNNQIFPLAF+IVDSENDASW WFF
Subjt:  SGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

5.5e-11

26.45

Show/hide

Query:  NIGSSSSVSNDEVIREISYHGD-----LKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDC
        N GS S  S   ++  +   GD     L  K L E K+ +   +C I  +     R T  ++  +E  C +  CKW + ASR ++  L+ + +     DC
Subjt:  NIGSSSSVSNDEVIREISYHGD-----LKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDC

Query:  ---SLNTTQS-CHSKLLQRFMSTDRSIPKAIVHK--------AHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNPEMDD------
            LN   + C    ++R +    ++  A + K        A   +  + S      AK   +K   GD  + + LI  L   L  SN  + D      
Subjt:  ---SLNTTQS-CHSKLLQRFMSTDRSIPKAIVHK--------AHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNPEMDD------

Query:  -----SGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWF
                F+    AF  SI+ +++CRP+I VD   L  K+   L+  S+ +  NQ FPLAF +    +  SW WF
Subjt:  -----SGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWTWF

AT1G64260.1 MuDR family transposase

4.0e-14

26.11

Show/hide

Query:  FRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTTQSCHSKL----LQRFMSTDRSIPKAIVHK-AHTNLGVNISYQKAWRAKEHIVKILKGDAVE
        F C++  CKW +RA+R ++  L  + KY     CS        S+     ++R +    ++  A + K      G  +   K    K  ++K + GD  +
Subjt:  FRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTTQSCHSKL----LQRFMSTDRSIPKAIVHK-AHTNLGVNISYQKAWRAKEHIVKILKGDAVE

Query:  LYSLIASLFDKLVESNPEM----------DDSGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWT
         + ++  L      SN  +           D   F+    +F  SIE +++CRP+I VD   L  K+   L+  S  +  N+ FPLAF +    +  SW 
Subjt:  LYSLIASLFDKLVESNPEM----------DDSGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDILLPTSSQNGNNQIFPLAFTIVDSENDASWT

Query:  WFF
        WFF
Subjt:  WFF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGTTAAATATAGGTTCTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAGAGATTTCTTATCATGGTGATTTGAAGGAAAAAAAATTATTTGAAAGTAAAGAAGT
TCTTTTAAAGTGTTTTTGCATAATAGCAGTGAAGAATAACTTTCAATTTAGAACTACAGTATCAAATTTGAGGGCTCTTGAATTCAGATGTTTGCAAGAAGGATGCAAAT
GGTATGTTAGGGCATCTCGTTATAAGAAGAGTGAGTTGTGGATGCTACGAAAATACATTTCTGACTGTGACTGTTCACTGAATACTACCCAAAGTTGTCACAGCAAGCTT
CTTCAGCGGTTCATGTCTACTGATCGTTCCATTCCAAAAGCAATTGTCCATAAGGCTCATACAAATCTTGGAGTTAATATAAGTTATCAAAAAGCTTGGAGGGCAAAAGA
ACACATAGTAAAGATATTAAAAGGTGATGCAGTTGAATTATACTCGTTGATTGCAAGCTTATTTGATAAATTGGTTGAATCTAACCCAGAGATGGATGATAGTGGTCGTT
TCAAGTTTTGCATTATGGCTTTTGGTGCATCAATTGAGAGGTGGAAATATTGTAGACCTATCATTTCTGTTGATGGCACGTTTTTGAAGTGTAAGTTTGGTGACATCCTA
TTACCAACCTCATCACAAAATGGTAACAATCAAATCTTTCCTCTTGCTTTTACAATTGTAGATTCTGAAAATGATGCATCATGGACATGGTTTTTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLLNIGSSSSVSNDEVIREISYHGDLKEKKLFESKEVLLKCFCIIAVKNNFQFRTTVSNLRALEFRCLQEGCKWYVRASRYKKSELWMLRKYISDCDCSLNTTQSCHSKL
LQRFMSTDRSIPKAIVHKAHTNLGVNISYQKAWRAKEHIVKILKGDAVELYSLIASLFDKLVESNPEMDDSGRFKFCIMAFGASIERWKYCRPIISVDGTFLKCKFGDIL
LPTSSQNGNNQIFPLAFTIVDSENDASWTWFF

PI0022366 (gene) of Melon (PI 482460) v1 genome