CuGenDBv2

Gene ID	PI0022376
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr11:9818006..9818848
RNA-Seq Expression	PI0022376
Synteny	PI0022376
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0051276 - chromosome organization (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0004386 - helicase activity (molecular function) GO:0016491 - oxidoreductase activity (molecular function) GO:0032555 - purine ribonucleotide binding (molecular function) GO:0035639 - purine ribonucleoside triphosphate binding (molecular function)
InterPro domains	IPR029472 - Retrotransposon Copia-like, N-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034386.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.9e-91

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

TYJ95886.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.9e-91

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

TYJ97256.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.9e-91

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.9e-91

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

TYK16957.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucumis melo var. makuwa]

1.9e-91

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM64 Beta-galactosidase

9.3e-92

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

A0A5A7UGB2 Beta-galactosidase

9.3e-92

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

A0A5D3BDV4 Beta-galactosidase

9.3e-92

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

A0A5D3BJK7 Beta-galactosidase

9.3e-92

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

A0A5D3C4T4 Beta-galactosidase

9.3e-92

66.54

Show/hide

Query:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT
        P   QPSNP    H HAP      GQ P + N      +  L V+P QQP F G G++Q  NR   E GE+ST          SKNPVTSFP+  SN+IT
Subjt:  PPPFQPSNPLVSLHTHAPPLPFYHGQPPISTN------QPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQ---------SKNPVTSFPSRTSNFIT

Query:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR
        GS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGFLT EI  PPPG+  ERLW+ EDS IRSMLIN ME QIGKPLLYA TAKD WD+TQ LYSKR
Subjt:  GSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKR

Query:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP
        QNAS L+TLRKQVH CKQG +DVT+YFNKL LLWQEMDLCR+ VWDT NDS Q+AK+EEADRVYDFL GL+P
Subjt:  QNASHLHTLRKQVHECKQGAMDVTSYFNKLFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATGGGTCCGTCGTGCCGCCGCCATTCCAACCATCTAACCCTCTTGTCAGTTTGCACACTCACGCGCCGCCGCTGCCCTTCTACCATGGACAGCCGCCTATTTCGAC
TAACCAGCCGCCGCTGTCTGTTAATCCTTCACAGCAGCCTTACTTCCATGGTGCTGGAGTTGAACAAAACCACAACAGACTTGGGTTTGAAGTCGGCGAGACCTCGACAC
AATCCAAAAACCCGGTAACGTCGTTCCCTTCTCGAACATCAAATTTTATAACTGGCTCTATGGTTCCTTCCACAGGTAACTTTTCAGGAGAAAAACTGAATGGCCAGAAT
TTCTTCTCTTGGTCTCAATCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGTTTCTGACTAGTGAGATTCCCTGTCCTCCACCTGGCAATGATCAAGAACGCCT
TTGGAGAGCAGAGGACTCCTTTATTCGGTCCATGCTAATCAATATTATGGAGTCTCAGATAGGCAAACCCCTCCTGTATGCTGCTACTGCAAAGGACTTCTGGGACTCCA
CTCAGAAACTTTACTCTAAACGTCAGAATGCCTCCCATCTGCATACCTTGAGAAAACAAGTCCATGAATGCAAACAAGGAGCAATGGACGTCACCTCTTATTTTAACAAA
CTTTTCCTGTTGTGGCAAGAGATGGATCTGTGTAGAGACATTGTTTGGGACACTTATAATGACAGTTTACAGTTTGCCAAGATAGAAGAAGCGGACCGTGTGTATGACTT
TCTTGTCGGCCTCCATCCTAATTTGATACTGTTTGTGGACGTATCCTTGGCCAAAGACCTCTTTTGTCCCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNGSVVPPPFQPSNPLVSLHTHAPPLPFYHGQPPISTNQPPLSVNPSQQPYFHGAGVEQNHNRLGFEVGETSTQSKNPVTSFPSRTSNFITGSMVPSTGNFSGEKLNGQN
FFSWSQSIKMFLEGRQQFGFLTSEIPCPPPGNDQERLWRAEDSFIRSMLINIMESQIGKPLLYAATAKDFWDSTQKLYSKRQNASHLHTLRKQVHECKQGAMDVTSYFNK
LFLLWQEMDLCRDIVWDTYNDSLQFAKIEEADRVYDFLVGLHPNLILFVDVSLAKDLFCP

PI0022376 (gene) of Melon (PI 482460) v1 genome