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PI0022401 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022401
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr05:19580389..19582351
RNA-Seq ExpressionPI0022401
SyntenyPI0022401
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038406.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-2866.37Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ   L K+  E+L  SSK GIIIREN LF+NS  A+NLL+KESHLEVV VMM D+TTEA M E++RKI+ LMK +EE+DHEI  L+DQMKA ETA+SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGKV
        +TSA+K  DKGKV
Subjt:  QTSAVKANDKGKV

KAA0068200.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-2765.18Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ + L K+  E+L  S K  IIIR+N LF+NS  A+NL +KESHLEVV+VMMVDVT EA M EM+RKI+ LMK +EE+DHEI VL+DQMKA ET +SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGK
        QT  VKA DKGK
Subjt:  QTSAVKANDKGK

TYJ96985.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-2866.37Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ   L K+  E+L  SSK GIIIREN LF+NS  A+NLL+KESHL+VV VMM D+TTEA M E++RKI+ LMK +EE+DHEI  L+DQMKA ETA+SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGKV
        +TSA+KA DKGKV
Subjt:  QTSAVKANDKGKV

TYK04575.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-2765.18Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ + L K+  E+L  S K GIIIR+N LF+NS  A+NL +KESHLEVV VMMVDVT EA M EM+RKI+ LMK +EE+DHEI  L+DQMKA ET +SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGK
        QT  VKA DKGK
Subjt:  QTSAVKANDKGK

TYK23838.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-2765.18Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ + L K+  E+L  S K GIII +N LF+NS  A+NL +KESHLEVV VMMVDVT EA M EM+RKI+ LMK +EE+DHEI  L+DQMKA ETA+SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGK
        QT  VKA DKGK
Subjt:  QTSAVKANDKGK

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein1.3e-2764.29Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ + L K+  E+L  S K GI+IR+N LF+NS  A+NL +KESHLEVV VMMVDVT EA M EM+RKI+ LMK +EE+DHEI  L+DQMKA ET++SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGK
        QT  VKA DKGK
Subjt:  QTSAVKANDKGK

A0A5A7T864 Ty3-gypsy retrotransposon protein6.8e-2966.37Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ   L K+  E+L  SSK GIIIREN LF+NS  A+NLL+KESHLEVV VMM D+TTEA M E++RKI+ LMK +EE+DHEI  L+DQMKA ETA+SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGKV
        +TSA+K  DKGKV
Subjt:  QTSAVKANDKGKV

A0A5D3BEV5 Ty3-gypsy retrotransposon protein6.8e-2966.37Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ   L K+  E+L  SSK GIIIREN LF+NS  A+NLL+KESHL+VV VMM D+TTEA M E++RKI+ LMK +EE+DHEI  L+DQMKA ETA+SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGKV
        +TSA+KA DKGKV
Subjt:  QTSAVKANDKGKV

A0A5D3DCB4 Ty3-gypsy retrotransposon protein1.3e-2765.18Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ + L K+  E+L  S K  IIIR+N LF+NS  A+NL +KESHLEVV+VMMVDVT EA M EM+RKI+ LMK +EE+DHEI VL+DQMKA ET +SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGK
        QT  VKA DKGK
Subjt:  QTSAVKANDKGK

A0A5D3DK07 Ty3-gypsy retrotransposon protein7.5e-2865.18Show/hide
Query:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS
        QEQ + L K+  E+L  S K GIII +N LF+NS  A+NL +KESHLEVV VMMVDVT EA M EM+RKI+ LMK +EE+DHEI  L+DQMKA ETA+SS
Subjt:  QEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSS

Query:  QTSAVKANDKGK
        QT  VKA DKGK
Subjt:  QTSAVKANDKGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAACAAAGTTATGCCCTTGCGAAGGAAATCTGGGAACGACTAACGGGATCTTCTAAAAGCGGGATCATCATTAGAGAAAATGTTTTGTTCGACAACTCTGCTCG
TGCTACTAATTTATTGGAAAAAGAATCACACCTTGAAGTAGTGTATGTCATGATGGTAGATGTAACAACTGAGGCAGTCATGACAGAGATGAAGAGGAAAATAGATCTCC
TAATGAAAGCTATCGAGGAGCAAGATCATGAAATCACTGTCTTGAGAGATCAAATGAAGGCTCGTGAAACTGCTAAGTCAAGCCAAACTTCTGCTGTTAAAGCTAACGAT
AAAGGGAAAGTTGCTAAGAGTTTCAGGCATCCAATAGAAGCTACTACCGTCTTTGCCACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAACAAAGTTATGCCCTTGCGAAGGAAATCTGGGAACGACTAACGGGATCTTCTAAAAGCGGGATCATCATTAGAGAAAATGTTTTGTTCGACAACTCTGCTCG
TGCTACTAATTTATTGGAAAAAGAATCACACCTTGAAGTAGTGTATGTCATGATGGTAGATGTAACAACTGAGGCAGTCATGACAGAGATGAAGAGGAAAATAGATCTCC
TAATGAAAGCTATCGAGGAGCAAGATCATGAAATCACTGTCTTGAGAGATCAAATGAAGGCTCGTGAAACTGCTAAGTCAAGCCAAACTTCTGCTGTTAAAGCTAACGAT
AAAGGGAAAGTTGCTAAGAGTTTCAGGCATCCAATAGAAGCTACTACCGTCTTTGCCACGTAG
Protein sequenceShow/hide protein sequence
MQEQSYALAKEIWERLTGSSKSGIIIRENVLFDNSARATNLLEKESHLEVVYVMMVDVTTEAVMTEMKRKIDLLMKAIEEQDHEITVLRDQMKARETAKSSQTSAVKAND
KGKVAKSFRHPIEATTVFAT