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PI0022410 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022410
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:9860284..9861792
RNA-Seq ExpressionPI0022410
SyntenyPI0022410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.3e-3985.71Show/hide
Query:  LRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAFGVGYYDSEV
        LRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPVHR RVRVEEAELDEVYHN+ EVPP TQTQ+QTGYGSPM MMP FG GYYDSEV
Subjt:  LRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAFGVGYYDSEV

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.9e-4661.96Show/hide
Query:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAF---------GVG
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHR  VRVEEAELD+VYHN+ EVP  TQTQ+QTGYGSPM MMP F         G+G
Subjt:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAF---------GVG

Query:  YYDSEV------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH
        YYD+ V                                    DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRRR GCGTH
Subjt:  YYDSEV------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.6e-4561.41Show/hide
Query:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAF---------GVG
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHR  VRVEEAELD+VYHN+ EVP  TQTQ+QTGYGSPM MMP F         G+G
Subjt:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAF---------GVG

Query:  YYDSEV------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH
        YYD+ V                                    DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRR  GCGTH
Subjt:  YYDSEV------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]3.8e-5866.84Show/hide
Query:  MKRVDTHGVERAWHSCTDNYAKQQNEMFVKLLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPP
        M+RVDT GVERAWHSC D+YA  ++EMFV LLRSNN RLRDVADDPQQVLDICNNNERYMEEIH +YD+PIVPPP+HR RVRVEEAELDEVYH + EV P
Subjt:  MKRVDTHGVERAWHSCTDNYAKQQNEMFVKLLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPP

Query:  VTQTQNQTGYG-----SPMMMMPAFGVG--------------YYDSEVDVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH
        +TQTQ+QTGYG     S M + P+                  Y+++  DV D QEYQQEPENQE+  Q RVQSRRRQP +NRRR GCGTH
Subjt:  VTQTQNQTGYG-----SPMMMMPAFGVG--------------YYDSEVDVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.9e-4861.08Show/hide
Query:  LRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAFGVGYYDSEV--
        LRSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PIVPPPVHR R RVEEAELDEVYHN+ EVPP TQTQ+QTGYGSPM MMP FG GY DSEV  
Subjt:  LRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAFGVGYYDSEV--

Query:  -------------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH
                                                   DV D QEYQQEP+NQE+  Q RVQSRRRQP RNR+ SGCGTH
Subjt:  -------------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.5e-4085.71Show/hide
Query:  LRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAFGVGYYDSEV
        LRSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPVHR RVRVEEAELDEVYHN+ EVPP TQTQ+QTGYGSPM MMP FG GYYDSEV
Subjt:  LRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAFGVGYYDSEV

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.4e-4761.96Show/hide
Query:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAF---------GVG
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHR  VRVEEAELD+VYHN+ EVP  TQTQ+QTGYGSPM MMP F         G+G
Subjt:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAF---------GVG

Query:  YYDSEV------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH
        YYD+ V                                    DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRRR GCGTH
Subjt:  YYDSEV------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X28.0e-4661.41Show/hide
Query:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAF---------GVG
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHR  VRVEEAELD+VYHN+ EVP  TQTQ+QTGYGSPM MMP F         G+G
Subjt:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAF---------GVG

Query:  YYDSEV------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH
        YYD+ V                                    DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRR  GCGTH
Subjt:  YYDSEV------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X21.8e-5866.84Show/hide
Query:  MKRVDTHGVERAWHSCTDNYAKQQNEMFVKLLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPP
        M+RVDT GVERAWHSC D+YA  ++EMFV LLRSNN RLRDVADDPQQVLDICNNNERYMEEIH +YD+PIVPPP+HR RVRVEEAELDEVYH + EV P
Subjt:  MKRVDTHGVERAWHSCTDNYAKQQNEMFVKLLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPP

Query:  VTQTQNQTGYG-----SPMMMMPAFGVG--------------YYDSEVDVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH
        +TQTQ+QTGYG     S M + P+                  Y+++  DV D QEYQQEPENQE+  Q RVQSRRRQP +NRRR GCGTH
Subjt:  VTQTQNQTGYG-----SPMMMMPAFGVG--------------YYDSEVDVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein3.8e-4861.08Show/hide
Query:  LRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAFGVGYYDSEV--
        LRSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PIVPPPVHR R RVEEAELDEVYHN+ EVPP TQTQ+QTGYGSPM MMP FG GY DSEV  
Subjt:  LRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNI-EVPPVTQTQNQTGYGSPMMMMPAFGVGYYDSEV--

Query:  -------------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH
                                                   DV D QEYQQEP+NQE+  Q RVQSRRRQP RNR+ SGCGTH
Subjt:  -------------------------------------------DVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGGGTCGATACTCATGGGGTGGAGCGTGCTTGGCATAGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTGCTGAGATCGAATAATAG
AAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTC
CACCAGTTCACAGGAGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATATAGAAGTACCTCCAGTGACACAAACACAGAACCAAACTGGTTATGGT
AGTCCGATGATGATGATGCCAGCATTTGGAGTAGGATATTATGATTCTGAGGTCGACGTCCTAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCCAGG
ACAACCTAGAGTTCAGAGTCGACGACGACAACCAACTCGAAATCGACGACGTTCGGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCGGGTCGATACTCATGGGGTGGAGCGTGCTTGGCATAGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTGCTGAGATCGAATAATAG
AAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTC
CACCAGTTCACAGGAGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATATAGAAGTACCTCCAGTGACACAAACACAGAACCAAACTGGTTATGGT
AGTCCGATGATGATGATGCCAGCATTTGGAGTAGGATATTATGATTCTGAGGTCGACGTCCTAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCCAGG
ACAACCTAGAGTTCAGAGTCGACGACGACAACCAACTCGAAATCGACGACGTTCGGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MKRVDTHGVERAWHSCTDNYAKQQNEMFVKLLRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVHRRRVRVEEAELDEVYHNIEVPPVTQTQNQTGYG
SPMMMMPAFGVGYYDSEVDVLDPQEYQQEPENQEEPGQPRVQSRRRQPTRNRRRSGCGTH