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PI0022419 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022419
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:7933261..7934489
RNA-Seq ExpressionPI0022419
SyntenyPI0022419
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041933.1 hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa]1.5e-2233.5Show/hide
Query:  FYAAEYHPTEYYAMVEGERVYFTVEAINKLHDLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPT
        FY    +  E YAMV+G +V F ++ IN    L  N   +GH +   P +R    AL+ +AW   +W+IT T +Y L+ H L  + ++W  F KKKI+PT
Subjt:  FYAAEYHPTEYYAMVEGERVYFTVEAINKLHDLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPT

Query:  HHDIIVPLQYAM-IYCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEAL----CLQVG----------------LNHIITLHQNKEEGRRLKT
         HDI + ++  M +YCIM+ + +++  I+ + ++ W++  + A PFS +IE      CL +                 L+HII +H+NK + + LKT
Subjt:  HHDIIVPLQYAM-IYCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEAL----CLQVG----------------LNHIITLHQNKEEGRRLKT

KAA0049609.1 transposase [Cucumis melo var. makuwa]3.3e-2543.24Show/hide
Query:  EYYAMVEGERVYFTVEAINKLHDLPMNVETL-GHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPL
        E YA+VE E+V FT E IN+L+DLP ++    G  L+    +  A + ++ I WP A+   T T + QL+PHQLT +AN+W FFIKKKI PTHHD  +  
Subjt:  EYYAMVEGERVYFTVEAINKLHDLPMNVETL-GHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPL

Query:  QYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ
        +YA++ YCI  +   +L  +M ++ L WM  P +A PF + ++ LCL+
Subjt:  QYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ

KAA0058997.1 hypothetical protein E6C27_scaffold233G00130 [Cucumis melo var. makuwa]9.0e-2334.47Show/hide
Query:  QQKQEIVETIENLTRMLEEKEEKKEKRRRELAKLSEQVEALSSKRKAIRGEDVELVE------ELERTSKIELDVVKKFYAAEYHPTEYYAMVEGERVYF
        Q+K++ VE++  +   L + +  K+   +ELAK  +QVE L  K +A   + V  +E      + E  +K+++DVV  FYA ++HP + YA ++ E+V F
Subjt:  QQKQEIVETIENLTRMLEEKEEKKEKRRRELAKLSEQVEALSSKRKAIRGEDVELVE------ELERTSKIELDVVKKFYAAEYHPTEYYAMVEGERVYF

Query:  TVEAINKLHDLPMNVET-LGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPLQYAM-IYCIMKRL
          E IN+L+ LP   E  LGH L+  P                                   TKAN+  FF+KKKI+P  HD +VP +Y M +YCI+ + 
Subjt:  TVEAINKLHDLPMNVET-LGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPLQYAM-IYCIMKRL

Query:  VVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ
          D+N I++  LL WME P  A P  SI+E  CL+
Subjt:  VVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]3.6e-3245.18Show/hide
Query:  KIELDVVKKFYAAEYHPTEYYAMVEGERVYFTVEAINKLHDLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEI-TSTWKYQLYPHQLTTKANMWN
        KI +DVV KFY  +++P++ +  +E E+ YF VE IN+L++ P + E LG  +VT+  K  A EAL+ +AWP    E+     +YQLYPH LTTKAN+W 
Subjt:  KIELDVVKKFYAAEYHPTEYYAMVEGERVYFTVEAINKLHDLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEI-TSTWKYQLYPHQLTTKANMWN

Query:  FFIKKKIMPTHHDIIVPLQYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ
        FF K KI PT +D  + + Y +I YCIM +  ++L+ I++ ++L WME P +A+PF S++E LCL+
Subjt:  FFIKKKIMPTHHDIIVPLQYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]3.3e-2543.24Show/hide
Query:  EYYAMVEGERVYFTVEAINKLHDLPMNVETL-GHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPL
        E YA+VE E+V FT E IN+L+DLP ++    G  L+    +  A + ++ I WP A+   T T + QL+PHQLT +AN+W FFIKKKI PTHHD  +  
Subjt:  EYYAMVEGERVYFTVEAINKLHDLPMNVETL-GHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPL

Query:  QYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ
        +YA++ YCI  +   +L  +M ++ L WM  P +A PF + ++ LCL+
Subjt:  QYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase1.6e-2543.24Show/hide
Query:  EYYAMVEGERVYFTVEAINKLHDLPMNVETL-GHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPL
        E YA+VE E+V FT E IN+L+DLP ++    G  L+    +  A + ++ I WP A+   T T + QL+PHQLT +AN+W FFIKKKI PTHHD  +  
Subjt:  EYYAMVEGERVYFTVEAINKLHDLPMNVETL-GHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPL

Query:  QYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ
        +YA++ YCI  +   +L  +M ++ L WM  P +A PF + ++ LCL+
Subjt:  QYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ

A0A5A7V6M5 Gag/pol protein1.8e-3245.18Show/hide
Query:  KIELDVVKKFYAAEYHPTEYYAMVEGERVYFTVEAINKLHDLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEI-TSTWKYQLYPHQLTTKANMWN
        KI +DVV KFY  +++P++ +  +E E+ YF VE IN+L++ P + E LG  +VT+  K  A EAL+ +AWP    E+     +YQLYPH LTTKAN+W 
Subjt:  KIELDVVKKFYAAEYHPTEYYAMVEGERVYFTVEAINKLHDLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEI-TSTWKYQLYPHQLTTKANMWN

Query:  FFIKKKIMPTHHDIIVPLQYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ
        FF K KI PT +D  + + Y +I YCIM +  ++L+ I++ ++L WME P +A+PF S++E LCL+
Subjt:  FFIKKKIMPTHHDIIVPLQYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ

A0A5D3CVL7 Uncharacterized protein1.6e-2543.24Show/hide
Query:  EYYAMVEGERVYFTVEAINKLHDLPMNVETL-GHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPL
        E YA+VE E+V FT E IN+L+DLP ++    G  L+    +  A + ++ I WP A+   T T + QL+PHQLT +AN+W FFIKKKI PTHHD  +  
Subjt:  EYYAMVEGERVYFTVEAINKLHDLPMNVETL-GHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPL

Query:  QYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ
        +YA++ YCI  +   +L  +M ++ L WM  P +A PF + ++ LCL+
Subjt:  QYAMI-YCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ

A0A5D3D2B5 Uncharacterized protein7.4e-2333.5Show/hide
Query:  FYAAEYHPTEYYAMVEGERVYFTVEAINKLHDLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPT
        FY    +  E YAMV+G +V F ++ IN    L  N   +GH +   P +R    AL+ +AW   +W+IT T +Y L+ H L  + ++W  F KKKI+PT
Subjt:  FYAAEYHPTEYYAMVEGERVYFTVEAINKLHDLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPT

Query:  HHDIIVPLQYAM-IYCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEAL----CLQVG----------------LNHIITLHQNKEEGRRLKT
         HDI + ++  M +YCIM+ + +++  I+ + ++ W++  + A PFS +IE      CL +                 L+HII +H+NK + + LKT
Subjt:  HHDIIVPLQYAM-IYCIMKRLVVDLNVIMRDSLLGWMEAPNDALPFSSIIEAL----CLQVG----------------LNHIITLHQNKEEGRRLKT

A0A5D3D7S2 Uncharacterized protein4.4e-2334.47Show/hide
Query:  QQKQEIVETIENLTRMLEEKEEKKEKRRRELAKLSEQVEALSSKRKAIRGEDVELVE------ELERTSKIELDVVKKFYAAEYHPTEYYAMVEGERVYF
        Q+K++ VE++  +   L + +  K+   +ELAK  +QVE L  K +A   + V  +E      + E  +K+++DVV  FYA ++HP + YA ++ E+V F
Subjt:  QQKQEIVETIENLTRMLEEKEEKKEKRRRELAKLSEQVEALSSKRKAIRGEDVELVE------ELERTSKIELDVVKKFYAAEYHPTEYYAMVEGERVYF

Query:  TVEAINKLHDLPMNVET-LGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPLQYAM-IYCIMKRL
          E IN+L+ LP   E  LGH L+  P                                   TKAN+  FF+KKKI+P  HD +VP +Y M +YCI+ + 
Subjt:  TVEAINKLHDLPMNVET-LGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPLQYAM-IYCIMKRL

Query:  VVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ
          D+N I++  LL WME P  A P  SI+E  CL+
Subjt:  VVDLNVIMRDSLLGWMEAPNDALPFSSIIEALCLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACGGAGAGGGTCTCCCAACAAAAGCAAGAAATTGTGGAGACCATAGAAAATTTGACAAGGATGTTGGAGGAGAAAGAAGAAAAAAAAGAGAAAAGAAGGAGAGA
GCTTGCGAAGCTAAGTGAGCAAGTTGAGGCACTGTCCTCCAAGAGGAAGGCAATAAGAGGAGAAGACGTCGAGCTAGTGGAAGAGCTCGAACGGACTTCAAAGATTGAGT
TGGATGTGGTCAAGAAATTCTATGCTGCAGAGTACCACCCCACCGAATACTATGCGATGGTAGAAGGAGAACGTGTCTACTTCACCGTTGAGGCCATTAACAAACTGCAC
GACTTGCCTATGAATGTGGAGACACTAGGACATTTGTTGGTGACTAGGCCTTTGAAGAGACATGCCAATGAAGCATTGGAGACTATCGCGTGGCCATGGGCAGAGTGGGA
AATCACATCCACATGGAAGTATCAATTGTATCCACACCAGCTGACTACTAAGGCTAACATGTGGAACTTCTTCATAAAAAAAAAGATAATGCCAACGCATCACGACATCA
TTGTACCACTGCAATACGCGATGATCTATTGCATCATGAAGAGGTTAGTAGTTGATCTCAACGTAATTATGAGAGACTCCCTCCTTGGCTGGATGGAAGCACCCAACGAC
GCCTTGCCTTTCTCTTCCATTATCGAGGCTCTTTGTTTGCAGGTGGGGCTTAACCACATTATCACCCTTCATCAAAACAAAGAAGAGGGTAGACGCCTGAAAACTCTAGG
AGAAGAGGAAGAAGCTCGTTGGGGCTTAGAGGAAAGCGAAACAGCAGGGAAAGGGACGTCGAAAACACCACCTCGCCACCTCAACCCTTTAAGAGGAAAAAGAAATAGCA
AAGCAGAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACGGAGAGGGTCTCCCAACAAAAGCAAGAAATTGTGGAGACCATAGAAAATTTGACAAGGATGTTGGAGGAGAAAGAAGAAAAAAAAGAGAAAAGAAGGAGAGA
GCTTGCGAAGCTAAGTGAGCAAGTTGAGGCACTGTCCTCCAAGAGGAAGGCAATAAGAGGAGAAGACGTCGAGCTAGTGGAAGAGCTCGAACGGACTTCAAAGATTGAGT
TGGATGTGGTCAAGAAATTCTATGCTGCAGAGTACCACCCCACCGAATACTATGCGATGGTAGAAGGAGAACGTGTCTACTTCACCGTTGAGGCCATTAACAAACTGCAC
GACTTGCCTATGAATGTGGAGACACTAGGACATTTGTTGGTGACTAGGCCTTTGAAGAGACATGCCAATGAAGCATTGGAGACTATCGCGTGGCCATGGGCAGAGTGGGA
AATCACATCCACATGGAAGTATCAATTGTATCCACACCAGCTGACTACTAAGGCTAACATGTGGAACTTCTTCATAAAAAAAAAGATAATGCCAACGCATCACGACATCA
TTGTACCACTGCAATACGCGATGATCTATTGCATCATGAAGAGGTTAGTAGTTGATCTCAACGTAATTATGAGAGACTCCCTCCTTGGCTGGATGGAAGCACCCAACGAC
GCCTTGCCTTTCTCTTCCATTATCGAGGCTCTTTGTTTGCAGGTGGGGCTTAACCACATTATCACCCTTCATCAAAACAAAGAAGAGGGTAGACGCCTGAAAACTCTAGG
AGAAGAGGAAGAAGCTCGTTGGGGCTTAGAGGAAAGCGAAACAGCAGGGAAAGGGACGTCGAAAACACCACCTCGCCACCTCAACCCTTTAAGAGGAAAAAGAAATAGCA
AAGCAGAAGCTTGA
Protein sequenceShow/hide protein sequence
MITERVSQQKQEIVETIENLTRMLEEKEEKKEKRRRELAKLSEQVEALSSKRKAIRGEDVELVEELERTSKIELDVVKKFYAAEYHPTEYYAMVEGERVYFTVEAINKLH
DLPMNVETLGHLLVTRPLKRHANEALETIAWPWAEWEITSTWKYQLYPHQLTTKANMWNFFIKKKIMPTHHDIIVPLQYAMIYCIMKRLVVDLNVIMRDSLLGWMEAPND
ALPFSSIIEALCLQVGLNHIITLHQNKEEGRRLKTLGEEEEARWGLEESETAGKGTSKTPPRHLNPLRGKRNSKAEA