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PI0022428 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022428
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr06:23715959..23716276
RNA-Seq ExpressionPI0022428
SyntenyPI0022428
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035842.1 uncharacterized protein E6C27_scaffold56G00030 [Cucumis melo var. makuwa]6.4e-4082.86Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M+T KEVWDALQKKYD+EEVGSKKY +SR+L+YQMTDD+SVEAQSHE+QKIAHEI +EGMPL++QFQV VIIDKLP LWK+FKNTLRHK K+FSLESLIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RLRIE
Subjt:  RLRIE
KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]3.4e-4182.86Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M+T KEVWDALQKKYD EE GSKKYA+SR+L+YQMTDD+SVEAQSHE+QKIAHEI +EGMPL++QFQV VIIDKLP LWK+FKNTLRHK K+FSLESLIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RLRIE
Subjt:  RLRIE
TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]2.2e-4080Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M+T K+VW+ALQKKYD EE GSKKYA+SR+L+YQMTDDRSVEAQSHE+QKIAHEI NEGMPL++QFQV +IIDKLP LWK+FKNTLRHK K+FSLE+LIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RL+IE
Subjt:  RLRIE
XP_038883500.1 uncharacterized protein LOC120074448 isoform X1 [Benincasa hispida]1.9e-3980.95Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M T KEVWDALQKKYD EE  SKKYA+S +L++QMTD++SVEAQSHELQKIAHEI  EGMPL+EQFQ+AVIIDKLP LWK+FKNTLRHK K+FSLESLIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RLRIE
Subjt:  RLRIE
XP_038883503.1 uncharacterized protein LOC120074448 isoform X4 [Benincasa hispida]1.9e-3980.95Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M T KEVWDALQKKYD EE  SKKYA+S +L++QMTD++SVEAQSHELQKIAHEI  EGMPL+EQFQ+AVIIDKLP LWK+FKNTLRHK K+FSLESLIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RLRIE
Subjt:  RLRIE
TrEMBL top hitse value%identityAlignment
A0A5A7SXC2 Uncharacterized protein3.1e-4082.86Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M+T KEVWDALQKKYD+EEVGSKKY +SR+L+YQMTDD+SVEAQSHE+QKIAHEI +EGMPL++QFQV VIIDKLP LWK+FKNTLRHK K+FSLESLIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RLRIE
Subjt:  RLRIE
A0A5A7UYY4 Uncharacterized protein1.6e-4182.86Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M+T KEVWDALQKKYD EE GSKKYA+SR+L+YQMTDD+SVEAQSHE+QKIAHEI +EGMPL++QFQV VIIDKLP LWK+FKNTLRHK K+FSLESLIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RLRIE
Subjt:  RLRIE
A0A5D3BDS3 Uncharacterized protein1.1e-4080Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M+T K+VW+ALQKKYD EE GSKKYA+SR+L+YQMTDDRSVEAQSHE+QKIAHEI NEGMPL++QFQV +IIDKLP LWK+FKNTLRHK K+FSLE+LIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RL+IE
Subjt:  RLRIE
A0A5D3BV12 Uncharacterized protein1.5e-3980.95Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M+T KEVWDA QKKYD EE GSKKYA++ +L+YQ+T+DRSVEAQSHE+QKIAHEI +EGMPL++QFQVAVIIDKLPSLWK+FKNTLRHK K FSLESLIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RLRIE
Subjt:  RLRIE
A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein1.5e-3980Show/hide
Query:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT
        M+T KEVWDALQKKYD +E  SKKYA+SR+L+YQMTDD+SVE QSHE+QKIAHEI +EGMPL++QFQVAVIIDKLP LWK+FKNTLRHK K+FSLESLIT
Subjt:  MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLIT

Query:  RLRIE
        RL+IE
Subjt:  RLRIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein3.6e-0935.9Show/hide
Query:  KEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNF
        KE+WD L+  Y  +E  SK+  + ++++++M ++R +  Q     KIA  I + GM L+E F V+ II K P  W+ F
Subjt:  KEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACCGTGAAAGAAGTTTGGGATGCACTGCAAAAGAAGTATGACGTCGAAGAAGTTGGATCCAAGAAATATGCGATGAGTCGATTCTTACAGTACCAGATGACTGA
TGACAGATCAGTGGAGGCCCAATCACACGAGTTGCAAAAAATTGCTCACGAAATAAGCAATGAAGGTATGCCACTTAATGAGCAGTTTCAAGTTGCTGTTATTATTGACA
AATTACCTTCACTATGGAAGAACTTTAAGAATACTCTAAGGCATAAGAGAAAACAGTTCTCCCTGGAGAGTCTGATCACTCGATTGAGAATTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCACCGTGAAAGAAGTTTGGGATGCACTGCAAAAGAAGTATGACGTCGAAGAAGTTGGATCCAAGAAATATGCGATGAGTCGATTCTTACAGTACCAGATGACTGA
TGACAGATCAGTGGAGGCCCAATCACACGAGTTGCAAAAAATTGCTCACGAAATAAGCAATGAAGGTATGCCACTTAATGAGCAGTTTCAAGTTGCTGTTATTATTGACA
AATTACCTTCACTATGGAAGAACTTTAAGAATACTCTAAGGCATAAGAGAAAACAGTTCTCCCTGGAGAGTCTGATCACTCGATTGAGAATTGAGTAG
Protein sequenceShow/hide protein sequence
MSTVKEVWDALQKKYDVEEVGSKKYAMSRFLQYQMTDDRSVEAQSHELQKIAHEISNEGMPLNEQFQVAVIIDKLPSLWKNFKNTLRHKRKQFSLESLITRLRIE