CuGenDBv2

Gene ID	PI0022465
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	S-protein homolog
Genome location	chr06:2866212..2869300
RNA-Seq Expression	PI0022465
Synteny	PI0022465
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

KGN56774.1 hypothetical protein Csa_010927 [Cucumis sativus]

4.0e-84

71.85

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Query:  MTNESYLLVCATVVSPRSSLPHSLSLVPTRG---------------AIGALEDFQRRYFLWTYRYSEIFFYYNNNYYICVCSDLMEQLFGSTTFDKETNK
        MTNESY LV ATVVSPRSSLPHSLSLVPTR                AIGALEDF+RRYFLWT R         NN   C+          + TFDK+T K
Subjt:  MTNESYLLVCATVVSPRSSLPHSLSLVPTRG---------------AIGALEDFQRRYFLWTYRYSEIFFYYNNNYYICVCSDLMEQLFGSTTFDKETNK

Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        ++                  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]

1.1e-73

99.28

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Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]

1.2e-75

100

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Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_016898907.1 PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo]

1.2e-75

100

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Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]

1.6e-72

97.83

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Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        SILMLIFFPFF+VFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6V3 S-protein homolog

1.9e-84

71.85

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Query:  MTNESYLLVCATVVSPRSSLPHSLSLVPTRG---------------AIGALEDFQRRYFLWTYRYSEIFFYYNNNYYICVCSDLMEQLFGSTTFDKETNK
        MTNESY LV ATVVSPRSSLPHSLSLVPTR                AIGALEDF+RRYFLWT R         NN   C+          + TFDK+T K
Subjt:  MTNESYLLVCATVVSPRSSLPHSLSLVPTRG---------------AIGALEDFQRRYFLWTYRYSEIFFYYNNNYYICVCSDLMEQLFGSTTFDKETNK

Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        ++                  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog

5.7e-76

100

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Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog

5.7e-76

100

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Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog

5.3e-74

99.28

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Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1GCS3 S-protein homolog

1.5e-68

92.03

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Query:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK
        SILMLIFFPFFTVF+SLLP + L+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSW VKTNFWI TTTSQFSCTVKLDRTR+SFDAFK
Subjt:  SILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFK

Query:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        VPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  VPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26798.1 Plant self-incompatibility protein S1 family

4.2e-07

33.33

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Query:  VRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG
        V +IN  T N    LV+ C +K  D+G  AL+  +   +  + N   TTT   ++CT       K+FD F+V RD      C   R+C W + E G
Subjt:  VRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family

2.2e-40

53.42

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Query:  TNKSILMLIFFPF---FTVFVSLL--PAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRT
        T K+I++L+F       T+  +L+  P     G E++VRVIN F +NSSLPLVIWC S  GD+GGRALQE DDF W  K + W  +  ++++CT+K D  
Subjt:  TNKSILMLIFFPF---FTVFVSLL--PAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRT

Query:  RKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        RK F+AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Subjt:  RKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

Sequences

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CDS sequence

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ATGACTAATGAATCGTATCTATTGGTTTGTGCTACAGTGGTGAGTCCGAGAAGTAGTTTGCCTCACAGCCTTTCTTTGGTGCCAACTAGGGGGGCTATTGGAGCTCTCGA
AGATTTTCAAAGGAGATACTTTCTGTGGACATACAGGTATTCTGAAATTTTTTTTTATTATAATAATAATTATTATATTTGTGTGTGTTCCGATCTCATGGAACAATTGT
TTGGCTCTACTACATTTGATAAGGAAACAAATAAGAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTCGTGTCATTGTTACCTGCAGAGCAACTGTTTGGC
ATAGAATACGAAGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTCCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGA
GCATGATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTGATGCAT
TCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCATGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGATGAAGTAAACTGGAAGAAGGAT
TTCTCGTGGTAA

mRNA sequence

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Protein sequence

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MTNESYLLVCATVVSPRSSLPHSLSLVPTRGAIGALEDFQRRYFLWTYRYSEIFFYYNNNYYICVCSDLMEQLFGSTTFDKETNKSILMLIFFPFFTVFVSLLPAEQLFG
IEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKD
FSW

PI0022465 (gene) of Melon (PI 482460) v1 genome