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PI0022475 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022475
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr09:12208906..12209389
RNA-Seq ExpressionPI0022475
SyntenyPI0022475
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]4.8e-4575Show/hide
Query:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL
        KH TYFEDNRHHLVSS IPPPSQP+LPKNRGSN+GGK+IRL+EAMAP  E EVKEHK++SDSS+SD HWKRP KKAK S D   GRG +A+E+P+VP PL
Subjt:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL

Query:  SPLDGHLQGLIEICSDDSLTGSHAVDSA
        SPL+ HL+GLIE  SD+SLTG HAVDSA
Subjt:  SPLDGHLQGLIEICSDDSLTGSHAVDSA

KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]9.0e-4475Show/hide
Query:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL
        KH TYFEDNRHHLVSS IPPPSQP+LPKNRGSN+GGK+IRL+EAMAP  E EVKEH  +SDSS+SD HWKRP KKAK SDD   GRG +A+E+P+VP PL
Subjt:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL

Query:  SPLDGHLQGLIEICSDDSLTGSHAVDSA
        SPL+ HL+GLIE  SD+SLTG HAVDSA
Subjt:  SPLDGHLQGLIEICSDDSLTGSHAVDSA

KAA0048379.1 hypothetical protein E6C27_scaffold264G00980 [Cucumis melo var. makuwa]4.0e-4474.22Show/hide
Query:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL
        KH TYFEDNRHHLVSSAIPPPSQP+LPKNRGSN+GGK+IRL+EAM P  E EVKEHK++SDSS+SD HWKR  KKAK S D   GRG +A+E+P+VP PL
Subjt:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL

Query:  SPLDGHLQGLIEICSDDSLTGSHAVDSA
        SPL+ HL+GLIE  SD+SLTG HAVDSA
Subjt:  SPLDGHLQGLIEICSDDSLTGSHAVDSA

KAA0055892.1 hypothetical protein E6C27_scaffold438G00100 [Cucumis melo var. makuwa]2.4e-4473.44Show/hide
Query:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL
        KHVTYFEDNRHHLVSS IPPPSQP+LPKNRGSN+GGK+IRL+EAMAP  E EVK+HK++SDSS+SD HWKRP KKAK S D   GRG +A+E+P+VP PL
Subjt:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL

Query:  SPLDGHLQGLIEICSDDSLTGSHAVDSA
        SPL+ HL+GLIE  +D+SL G HAVDSA
Subjt:  SPLDGHLQGLIEICSDDSLTGSHAVDSA

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]9.0e-4471.32Show/hide
Query:  MKHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTP
        M+H+TYFE+NRHHLVSSAIPPPSQP+LPKNRGSN+GGK+IRL+EAMAP  E EV EHK++SDSS+SD HWKRP KKAK S D+  GRG +A+ +P+VP P
Subjt:  MKHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTP

Query:  LSPLDGHLQGLIEICSDDSLTGSHAVDSA
        LSPL+ HL+GLI + SD+SL G HAVDSA
Subjt:  LSPLDGHLQGLIEICSDDSLTGSHAVDSA

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein2.3e-4575Show/hide
Query:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL
        KH TYFEDNRHHLVSS IPPPSQP+LPKNRGSN+GGK+IRL+EAMAP  E EVKEHK++SDSS+SD HWKRP KKAK S D   GRG +A+E+P+VP PL
Subjt:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL

Query:  SPLDGHLQGLIEICSDDSLTGSHAVDSA
        SPL+ HL+GLIE  SD+SLTG HAVDSA
Subjt:  SPLDGHLQGLIEICSDDSLTGSHAVDSA

A0A5A7TFC8 PMD domain-containing protein4.4e-4475Show/hide
Query:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL
        KH TYFEDNRHHLVSS IPPPSQP+LPKNRGSN+GGK+IRL+EAMAP  E EVKEH  +SDSS+SD HWKRP KKAK SDD   GRG +A+E+P+VP PL
Subjt:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL

Query:  SPLDGHLQGLIEICSDDSLTGSHAVDSA
        SPL+ HL+GLIE  SD+SLTG HAVDSA
Subjt:  SPLDGHLQGLIEICSDDSLTGSHAVDSA

A0A5A7U4K9 Uncharacterized protein2.0e-4474.22Show/hide
Query:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL
        KH TYFEDNRHHLVSSAIPPPSQP+LPKNRGSN+GGK+IRL+EAM P  E EVKEHK++SDSS+SD HWKR  KKAK S D   GRG +A+E+P+VP PL
Subjt:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL

Query:  SPLDGHLQGLIEICSDDSLTGSHAVDSA
        SPL+ HL+GLIE  SD+SLTG HAVDSA
Subjt:  SPLDGHLQGLIEICSDDSLTGSHAVDSA

A0A5A7UJ48 PMD domain-containing protein1.1e-4473.44Show/hide
Query:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL
        KHVTYFEDNRHHLVSS IPPPSQP+LPKNRGSN+GGK+IRL+EAMAP  E EVK+HK++SDSS+SD HWKRP KKAK S D   GRG +A+E+P+VP PL
Subjt:  KHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPL

Query:  SPLDGHLQGLIEICSDDSLTGSHAVDSA
        SPL+ HL+GLIE  +D+SL G HAVDSA
Subjt:  SPLDGHLQGLIEICSDDSLTGSHAVDSA

A0A5A7UVX0 PMD domain-containing protein4.4e-4471.32Show/hide
Query:  MKHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTP
        M+H+TYFE+NRHHLVSSAIPPPSQP+LPKNRGSN+GGK+IRL+EAMAP  E EV EHK++SDSS+SD HWKRP KKAK S D+  GRG +A+ +P+VP P
Subjt:  MKHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTP

Query:  LSPLDGHLQGLIEICSDDSLTGSHAVDSA
        LSPL+ HL+GLI + SD+SL G HAVDSA
Subjt:  LSPLDGHLQGLIEICSDDSLTGSHAVDSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATGTGACCTATTTTGAGGATAATAGACACCATTTGGTGAGCAGTGCCATTCCTCCCCCATCACAACCCAAACTACCCAAGAATCGAGGAAGCAATGTGGGCGG
CAAACAGATCCGCTTGATTGAGGCAATGGCTCCTACCCACGAGAGAGAGGTCAAGGAGCATAAAGAGCAGAGCGATAGCAGCAGAAGCGACTGTCATTGGAAGAGACCTT
CGAAGAAAGCAAAGGCATCAGACGATGATTCATGTGGAAGAGGTTCAACTGCTATGGAAATTCCTAATGTTCCAACACCATTGTCACCTTTGGATGGTCATCTTCAAGGA
CTTATAGAGATATGTAGTGATGACTCTCTGACAGGGTCACATGCCGTGGATTCGGCCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATGTGACCTATTTTGAGGATAATAGACACCATTTGGTGAGCAGTGCCATTCCTCCCCCATCACAACCCAAACTACCCAAGAATCGAGGAAGCAATGTGGGCGG
CAAACAGATCCGCTTGATTGAGGCAATGGCTCCTACCCACGAGAGAGAGGTCAAGGAGCATAAAGAGCAGAGCGATAGCAGCAGAAGCGACTGTCATTGGAAGAGACCTT
CGAAGAAAGCAAAGGCATCAGACGATGATTCATGTGGAAGAGGTTCAACTGCTATGGAAATTCCTAATGTTCCAACACCATTGTCACCTTTGGATGGTCATCTTCAAGGA
CTTATAGAGATATGTAGTGATGACTCTCTGACAGGGTCACATGCCGTGGATTCGGCCCTTTAA
Protein sequenceShow/hide protein sequence
MKHVTYFEDNRHHLVSSAIPPPSQPKLPKNRGSNVGGKQIRLIEAMAPTHEREVKEHKEQSDSSRSDCHWKRPSKKAKASDDDSCGRGSTAMEIPNVPTPLSPLDGHLQG
LIEICSDDSLTGSHAVDSAL