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PI0022476 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022476
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionE3 ubiquitin-protein ligase PRT1 isoform X2
Genome locationchr07:11098179..11100577
RNA-Seq ExpressionPI0022476
SyntenyPI0022476
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0051103 - DNA ligation involved in DNA repair (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003910 - DNA ligase (ATP) activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]1.5e-1548.42Show/hide
Query:  QAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDPETSGQEYAVSPTRRMAREALEVIAWPRVAWEVTPTG
        +AFGW+KFFKG +K+RL VV KFYA++ N  E+   +  K+  FN EAIN+LY  P D ET       +  +R A EALE IAW    +++TPTG
Subjt:  QAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDPETSGQEYAVSPTRRMAREALEVIAWPRVAWEVTPTG

KAA0034861.1 E3 ubiquitin-protein ligase PRT1 isoform X2 [Cucumis melo var. makuwa]1.3e-1478.85Show/hide
Query:  NPTVATLPSLDPYNTVLPTNQVPWKTYYRRNLRKNVEFSTTQSAPVQDSEPL
        +PT A LP+LDP+NT+LPTNQVPWKTYYRRNLRKNV  STTQ AP+QDSEP+
Subjt:  NPTVATLPSLDPYNTVLPTNQVPWKTYYRRNLRKNVEFSTTQSAPVQDSEPL

KAA0056424.1 hypothetical protein E6C27_scaffold186G001800 [Cucumis melo var. makuwa]2.3e-1646.23Show/hide
Query:  IKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDPET-SGQEYAVSPTRRMARE
        +K+EKGLFPF   LP FL  PI+AF W+K F+G TK+RL VV+ FY    +  +    + G+ ISF AE INELY  PN+ E   G +    PT+ + +E
Subjt:  IKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDPET-SGQEYAVSPTRRMARE

Query:  ALEVIA
         L+ IA
Subjt:  ALEVIA

KAE8645907.1 hypothetical protein Csa_023734, partial [Cucumis sativus]3.0e-1654.32Show/hide
Query:  IKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDP
        IK+EKGL PF  PL DFL+ PI+AF WKKFF   T++RL +V+ FYAA  +  E  V + G+ + F  E+INELY  PNDP
Subjt:  IKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDP

TYK25768.1 stress response protein NST1-like [Cucumis melo var. makuwa]1.7e-1438.69Show/hide
Query:  MSPIDQGPPPRKPR----EVATPSKGKKTSGRSGPEERPSGGEATTKTSSINFLIKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFY
        MSP+   P P +      E    SK K+ +G S P++   G + + +   ++ LIK+EKGL PFN PL +FL+  I+    +KFF   TK++L +V+ FY
Subjt:  MSPIDQGPPPRKPR----EVATPSKGKKTSGRSGPEERPSGGEATTKTSSINFLIKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFY

Query:  AANLNADEFSVEISGKTISFNAEAINELYKLPNDPET
         A  + +E  + + G+ +SF  E INELY LPND +T
Subjt:  AANLNADEFSVEISGKTISFNAEAINELYKLPNDPET

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein7.3e-1648.42Show/hide
Query:  QAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDPETSGQEYAVSPTRRMAREALEVIAWPRVAWEVTPTG
        +AFGW+KFFKG +K+RL VV KFYA++ N  E+   +  K+  FN EAIN+LY  P D ET       +  +R A EALE IAW    +++TPTG
Subjt:  QAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDPETSGQEYAVSPTRRMAREALEVIAWPRVAWEVTPTG

A0A5A7SZT1 E3 ubiquitin-protein ligase PRT1 isoform X26.2e-1578.85Show/hide
Query:  NPTVATLPSLDPYNTVLPTNQVPWKTYYRRNLRKNVEFSTTQSAPVQDSEPL
        +PT A LP+LDP+NT+LPTNQVPWKTYYRRNLRKNV  STTQ AP+QDSEP+
Subjt:  NPTVATLPSLDPYNTVLPTNQVPWKTYYRRNLRKNVEFSTTQSAPVQDSEPL

A0A5A7TBU7 Stress response protein NST1-like8.1e-1538.69Show/hide
Query:  MSPIDQGPPPRKPR----EVATPSKGKKTSGRSGPEERPSGGEATTKTSSINFLIKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFY
        MSP+   P P +      E    SK K+ +G S P++   G + + +   ++ LIK+EKGL PFN PL +FL+  I+    +KFF   TK++L +V+ FY
Subjt:  MSPIDQGPPPRKPR----EVATPSKGKKTSGRSGPEERPSGGEATTKTSSINFLIKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFY

Query:  AANLNADEFSVEISGKTISFNAEAINELYKLPNDPET
         A  + +E  + + G+ +SF  E INELY LPND +T
Subjt:  AANLNADEFSVEISGKTISFNAEAINELYKLPNDPET

A0A5A7UMK2 Uncharacterized protein1.1e-1646.23Show/hide
Query:  IKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDPET-SGQEYAVSPTRRMARE
        +K+EKGLFPF   LP FL  PI+AF W+K F+G TK+RL VV+ FY    +  +    + G+ ISF AE INELY  PN+ E   G +    PT+ + +E
Subjt:  IKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEISGKTISFNAEAINELYKLPNDPET-SGQEYAVSPTRRMARE

Query:  ALEVIA
         L+ IA
Subjt:  ALEVIA

A0A5D3DQE7 Stress response protein NST1-like8.1e-1538.69Show/hide
Query:  MSPIDQGPPPRKPR----EVATPSKGKKTSGRSGPEERPSGGEATTKTSSINFLIKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFY
        MSP+   P P +      E    SK K+ +G S P++   G + + +   ++ LIK+EKGL PFN PL +FL+  I+    +KFF   TK++L +V+ FY
Subjt:  MSPIDQGPPPRKPR----EVATPSKGKKTSGRSGPEERPSGGEATTKTSSINFLIKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFY

Query:  AANLNADEFSVEISGKTISFNAEAINELYKLPNDPET
         A  + +E  + + G+ +SF  E INELY LPND +T
Subjt:  AANLNADEFSVEISGKTISFNAEAINELYKLPNDPET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCCAATTGATCAAGGGCCACCGCCAAGAAAACCAAGGGAGGTCGCCACACCATCCAAAGGAAAGAAGACGAGTGGGCGTTCTGGACCTGAGGAGCGTCCATCAGG
CGGCGAAGCCACTACAAAAACATCTTCCATCAACTTTCTCATCAAGGTTGAGAAAGGGTTGTTTCCTTTTAATGGCCCACTTCCAGACTTTCTCTTCGCGCCTATCCAGG
CGTTCGGATGGAAGAAATTTTTCAAGGGGCACACCAAGTTGAGATTGGGGGTGGTGGAAAAATTCTATGCGGCTAACCTCAATGCTGATGAGTTTAGCGTGGAAATCAGT
GGCAAGACAATAAGCTTCAACGCGGAGGCCATCAACGAGTTATACAAACTGCCCAATGATCCTGAAACATCTGGGCAAGAATACGCAGTTAGCCCCACAAGAAGAATGGC
CCGTGAAGCGTTGGAGGTAATCGCCTGGCCTAGGGTCGCATGGGAAGTAACGCCAACAGGGAATCCTACCGTTGCTACCCTACCTAGCCTCGATCCTTACAACACAGTCC
TACCTACGAACCAAGTTCCTTGGAAAACCTACTATAGGAGGAATCTTAGAAAGAACGTCGAGTTCTCTACAACTCAGTCGGCTCCAGTCCAAGATTCTGAACCTCTACAA
GATCAAGATAAAGAAGGCAGTGATGGTGGGACTGAAGTCATTGCAAGAGTTACTGAGGATAACACTAGGGAGGATCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCCAATTGATCAAGGGCCACCGCCAAGAAAACCAAGGGAGGTCGCCACACCATCCAAAGGAAAGAAGACGAGTGGGCGTTCTGGACCTGAGGAGCGTCCATCAGG
CGGCGAAGCCACTACAAAAACATCTTCCATCAACTTTCTCATCAAGGTTGAGAAAGGGTTGTTTCCTTTTAATGGCCCACTTCCAGACTTTCTCTTCGCGCCTATCCAGG
CGTTCGGATGGAAGAAATTTTTCAAGGGGCACACCAAGTTGAGATTGGGGGTGGTGGAAAAATTCTATGCGGCTAACCTCAATGCTGATGAGTTTAGCGTGGAAATCAGT
GGCAAGACAATAAGCTTCAACGCGGAGGCCATCAACGAGTTATACAAACTGCCCAATGATCCTGAAACATCTGGGCAAGAATACGCAGTTAGCCCCACAAGAAGAATGGC
CCGTGAAGCGTTGGAGGTAATCGCCTGGCCTAGGGTCGCATGGGAAGTAACGCCAACAGGGAATCCTACCGTTGCTACCCTACCTAGCCTCGATCCTTACAACACAGTCC
TACCTACGAACCAAGTTCCTTGGAAAACCTACTATAGGAGGAATCTTAGAAAGAACGTCGAGTTCTCTACAACTCAGTCGGCTCCAGTCCAAGATTCTGAACCTCTACAA
GATCAAGATAAAGAAGGCAGTGATGGTGGGACTGAAGTCATTGCAAGAGTTACTGAGGATAACACTAGGGAGGATCGTTAA
Protein sequenceShow/hide protein sequence
MSPIDQGPPPRKPREVATPSKGKKTSGRSGPEERPSGGEATTKTSSINFLIKVEKGLFPFNGPLPDFLFAPIQAFGWKKFFKGHTKLRLGVVEKFYAANLNADEFSVEIS
GKTISFNAEAINELYKLPNDPETSGQEYAVSPTRRMAREALEVIAWPRVAWEVTPTGNPTVATLPSLDPYNTVLPTNQVPWKTYYRRNLRKNVEFSTTQSAPVQDSEPLQ
DQDKEGSDGGTEVIARVTEDNTREDR