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PI0022481 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022481
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription regulatory protein SNF2-like isoform X3
Genome locationchr09:5098050..5098449
RNA-Seq ExpressionPI0022481
SyntenyPI0022481
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046320.1 transcription regulatory protein SNF2-like isoform X3 [Cucumis melo var. makuwa]5.6e-0989.19Show/hide
Query:  MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGD
        MVTL YPHDLFPASLAASPSNRTSILVI D +LHTGD
Subjt:  MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGD
KGN51500.1 hypothetical protein Csa_007900 [Cucumis sativus]1.2e-1157.14Show/hide
Query:  MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGDNCF---TKEHPAE----------------KVSRILDSFVFLNDQVSV
        MVTL YPHDLFPASL ASPSNR SILVI D VL T D  F   T  + A                 K+ RILDSFVFLNDQ SV
Subjt:  MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGDNCF---TKEHPAE----------------KVSRILDSFVFLNDQVSV
TrEMBL top hitse value%identityAlignment
A0A0A0KPI2 Uncharacterized protein5.8e-1257.14Show/hide
Query:  MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGDNCF---TKEHPAE----------------KVSRILDSFVFLNDQVSV
        MVTL YPHDLFPASL ASPSNR SILVI D VL T D  F   T  + A                 K+ RILDSFVFLNDQ SV
Subjt:  MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGDNCF---TKEHPAE----------------KVSRILDSFVFLNDQVSV
A0A5D3E3L6 Transcription regulatory protein SNF2-like isoform X32.7e-0989.19Show/hide
Query:  MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGD
        MVTL YPHDLFPASLAASPSNRTSILVI D +LHTGD
Subjt:  MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTCTCGCATACCCTCATGATCTCTTTCCTGCATCACTCGCAGCTTCTCCATCCAATCGCACGTCTATCCTTGTGATCGGTGACCCCGTCCTTCATACCGGAGA
CAACTGTTTCACCAAAGAACACCCTGCAGAAAAGGTAAGTAGAATATTAGATTCTTTTGTGTTCCTTAATGACCAAGTGTCTGTAGGATTAATTGATTATATTGTTAGAT
TAGTTAAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTACTCTCGCATACCCTCATGATCTCTTTCCTGCATCACTCGCAGCTTCTCCATCCAATCGCACGTCTATCCTTGTGATCGGTGACCCCGTCCTTCATACCGGAGA
CAACTGTTTCACCAAAGAACACCCTGCAGAAAAGGTAAGTAGAATATTAGATTCTTTTGTGTTCCTTAATGACCAAGTGTCTGTAGGATTAATTGATTATATTGTTAGAT
TAGTTAAGATATAG
Protein sequenceShow/hide protein sequence
MVTLAYPHDLFPASLAASPSNRTSILVIGDPVLHTGDNCFTKEHPAEKVSRILDSFVFLNDQVSVGLIDYIVRLVKI