; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022484 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022484
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:12711519..12713797
RNA-Seq ExpressionPI0022484
SyntenyPI0022484
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032215.1 hypothetical protein E6C27_scaffold219G00270 [Cucumis melo var. makuwa]6.4e-1557.14Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFV
        M   F  VL EN  M++QIA+LNS       KV+G+EA VSQL+SMV Q S  L +LT+ M+ HSNQSR I E HD +FV QMEYTH+VFV
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFV

KAA0049609.1 transposase [Cucumis melo var. makuwa]6.2e-1042.62Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIG
        M   F  +L EN A ++QIASLN+       +V+GLEA VS L+S V Q SSTLT+LT LM+ +  Q   I +RH  +F  +MEY H VFVQR  +    
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIG

Query:  SDLMAPNPPIEQTDPPPRKLDP
        + +   + PI+  D  P + DP
Subjt:  SDLMAPNPPIEQTDPPPRKLDP

TYK00745.1 hypothetical protein E5676_scaffold61472G00010 [Cucumis melo var. makuwa]3.2e-1456.04Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFV
        M   F  VL EN  M++QIA+LNS       KV+G+EA VSQL+SMV Q S  L +LT+ M+ HSNQS  I E HD +FV QMEYTH+VFV
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFV

TYK05894.1 hypothetical protein E5676_scaffold1085G00020 [Cucumis melo var. makuwa]5.0e-1251.06Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRV
        M  AF  V+ EN  M+ QI +          +++GLEA VS L+SMV Q SS LT LT+LM+ +SNQS  IAE+H+ +F  QMEYTH VFV RV
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRV

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]6.2e-1042.62Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIG
        M   F  +L EN A ++QIASLN+       +V+GLEA VS L+S V Q SSTLT+LT LM+ +  Q   I +RH  +F  +MEY H VFVQR  +    
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIG

Query:  SDLMAPNPPIEQTDPPPRKLDP
        + +   + PI+  D  P + DP
Subjt:  SDLMAPNPPIEQTDPPPRKLDP

TrEMBL top hitse value%identityAlignment
A0A5A7SSN6 Uncharacterized protein3.1e-1557.14Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFV
        M   F  VL EN  M++QIA+LNS       KV+G+EA VSQL+SMV Q S  L +LT+ M+ HSNQSR I E HD +FV QMEYTH+VFV
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFV

A0A5A7U806 Transposase3.0e-1042.62Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIG
        M   F  +L EN A ++QIASLN+       +V+GLEA VS L+S V Q SSTLT+LT LM+ +  Q   I +RH  +F  +MEY H VFVQR  +    
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIG

Query:  SDLMAPNPPIEQTDPPPRKLDP
        + +   + PI+  D  P + DP
Subjt:  SDLMAPNPPIEQTDPPPRKLDP

A0A5D3BNP3 Uncharacterized protein1.5e-1456.04Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFV
        M   F  VL EN  M++QIA+LNS       KV+G+EA VSQL+SMV Q S  L +LT+ M+ HSNQS  I E HD +FV QMEYTH+VFV
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFV

A0A5D3C3K8 Uncharacterized protein2.4e-1251.06Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRV
        M  AF  V+ EN  M+ QI +          +++GLEA VS L+SMV Q SS LT LT+LM+ +SNQS  IAE+H+ +F  QMEYTH VFV RV
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRV

A0A5D3CVL7 Uncharacterized protein3.0e-1042.62Show/hide
Query:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIG
        M   F  +L EN A ++QIASLN+       +V+GLEA VS L+S V Q SSTLT+LT LM+ +  Q   I +RH  +F  +MEY H VFVQR  +    
Subjt:  MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIG

Query:  SDLMAPNPPIEQTDPPPRKLDP
        + +   + PI+  D  P + DP
Subjt:  SDLMAPNPPIEQTDPPPRKLDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAGGCCTTCCACACTGTACTCAAGGAGAATGCAGCCATGCAGCAGCAAATCGCCAGCCTCAACTCCACGGTCACGTGGCTAAACGCCAAGGTAGAAGGCTTGGA
AGCCATGGTCTCCCAGCTTTCCTCAATGGTTATGCAGACGTCCTCAACCTTGACCCACTTAACGAATTTGATGGTTGTGCATTCTAATCAGTCTCGCCAAATTGCGGAGC
GACATGACAGCCGGTTTGTGACTCAAATGGAATACACGCACGTGGTCTTTGTCCAGCGTGTTCCTCTGCCTGTCATTGGGTCGGATTTGATGGCACCAAATCCCCCCATT
GAGCAAACTGATCCACCTCCTCGCAAACTTGATCCTCGCTAG
mRNA sequenceShow/hide mRNA sequence
CTTTCTTCAACCCAACTTCAAGAATTCCAATTTTCTTCATGGGCTAAATCTTGAATTCTAAGTGCTCTCTTGGGTTCGACACCCCTCTTCCACATACTACTCACAATATC
CATTTTGGTAAGAAGGGTTAAAAATAATTTTGAGAGGTAATTGAGAATTGATGAAGGAGTAGACAGGAATACGATGTTGGCACTTCAAGGACTAGTTGCCGAGATTAACA
AGCTTCTACAATCTATGGCATTATCACAAGTAAATGTCGTGGGAAGTTCTGTTCATGTAGTACAATAGGTTGCTAAATTAGGTGTGTGGGATGCAGAGGTCCATATGACA
CCGAATCATGCCCAATACACACTAAGATTGTCGCCTACGTGAAGAATGACCTCTATTCGAATACTTACAATTAGGGGTGGAGAGATCACCCTAATTTCAGTTGTGGAGGT
CAAGAGCAAAACGCTTAGAGGTGGCAAGGTGGTCAGGGATATTATCGCCGCGAAGTACCTGACTATCGCCAAAAACTATACAATGATAGACCACGCCATTTAACACCTCA
ACATCAACAGACCACCACCACCCAATTCCACACTTCCCTCCAAATCGCCCATCTCCCCCAGCCAACACAGTCCTTGCTTGGTTATTTTCACCACAATCATCCTTCCCCAT
CCCTCATCCTCGCCAACCTCCTCACGATCCCTATCTCTCTCCAAGTCCACTTTCTCCACACTTCCCTCTCCTGAAAGCTCTCCACTATGATGAACTTCTGTGTCACCAAG
CCATGCACCGACCATTGATTTGAAGCATGTGTGTCCAGATTTGAATGTCTCGGTTATTGAAATATCTGAAGAGGACAAAGTACCATTGATCGCAACTGAGAATGCCAAGT
CGCTTAACCTTGAGAGACAGTTGGTTGTTTATGACCCATTCGTCAAAGGCAAATACCCTACCTCTAATGATGCATGTGAGACGAGCTTAGTAAGAAAAGTTGACCCTACT
ATTGAGACCCCTACAGAAAACCAAGGTCCTCTTTGCGATTTGCTCTTCCATGAAATAGCCAAGCCCATGACTGAGGCCTTCCACACTGTACTCAAGGAGAATGCAGCCAT
GCAGCAGCAAATCGCCAGCCTCAACTCCACGGTCACGTGGCTAAACGCCAAGGTAGAAGGCTTGGAAGCCATGGTCTCCCAGCTTTCCTCAATGGTTATGCAGACGTCCT
CAACCTTGACCCACTTAACGAATTTGATGGTTGTGCATTCTAATCAGTCTCGCCAAATTGCGGAGCGACATGACAGCCGGTTTGTGACTCAAATGGAATACACGCACGTG
GTCTTTGTCCAGCGTGTTCCTCTGCCTGTCATTGGGTCGGATTTGATGGCACCAAATCCCCCCATTGAGCAAACTGATCCACCTCCTCGCAAACTTGATCCTCGCTAG
Protein sequenceShow/hide protein sequence
MTEAFHTVLKENAAMQQQIASLNSTVTWLNAKVEGLEAMVSQLSSMVMQTSSTLTHLTNLMVVHSNQSRQIAERHDSRFVTQMEYTHVVFVQRVPLPVIGSDLMAPNPPI
EQTDPPPRKLDPR