; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022490 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022490
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr07:11206450..11208536
RNA-Seq ExpressionPI0022490
SyntenyPI0022490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]3.8e-7968.3Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA
        M ENSQNFGN+A ELDN LTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNL+WGND 
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA

Query:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE
        Q+ TQA  +S+NQG+NLED++KA ATNT+SFQ EMKQQM+QLT AI K++GKGKLPAQPD+AN+SAISLRSGKIL+TP++ E+KV S  + L  +N+ KE
Subjt:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE

Query:  DNLENNTSSSSSKGTRDRAQDSPP
        + +E N S S+SK  +    D  P
Subjt:  DNLENNTSSSSSKGTRDRAQDSPP

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-7761.15Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA
        MAENSQ+F N+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNPNL+WGND 
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA

Query:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE
        Q+ TQA S+S+NQG+NLED++KA ATNT+SFQ EMKQQM+QLT AI K++GKGKL AQ ++AN+SA+SLRSGKIL+TP++ E+K  S P+ L  +N+ KE
Subjt:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE

Query:  DNLENNTSSSSSKGTRDRAQDSPPKLEIRILRRKEYESCNNFRPRRKADQSLEEQKKSFR
        + +E N S  +SK  +    D  P      + +  + S     P++K     EE  + FR
Subjt:  DNLENNTSSSSSKGTRDRAQDSPPKLEIRILRRKEYESCNNFRPRRKADQSLEEQKKSFR

KAA0065554.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.2e-7867.86Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA
        MAENSQ+F N+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGL+GHPNDK P+++E+ N++R+YDPHGNTYN+GWRDNP L+WGND 
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA

Query:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE
        Q+  QA S+S+NQG+NLED++KA A NT+SFQ EMKQQM+QLT AI K++GKGKLPAQP+HAN+SAISLRSGKIL+TP++ E+KV S  + L  +N+ KE
Subjt:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE

Query:  DNLENNTSSSSSKGTRDRAQDSPP
        +N+E N S S+ K  +    D  P
Subjt:  DNLENNTSSSSSKGTRDRAQDSPP

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-7767.56Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGND
        MA+N Q+FGN+ASE DNSLTKEVSELKSQMLNM TTLLTSFVQG  +KV KCGVCGL+GH N+KCP+++E+ N++R+YDPH NTYN+GWRDNPNL+WGND
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGND

Query:  AQRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKK
         Q+ TQA S+S+NQG+NLED++KA ATNT+SFQ EMKQQM+QLT AI K++GKGKLPAQ DHAN+SAISLRSGKIL+TP++ E+KV S P+ L  +N+ K
Subjt:  AQRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKK

Query:  EDNLENNTSSSSSKGTRDRAQDSPP
        E+ +E N S S+SK  +    D  P
Subjt:  EDNLENNTSSSSSKGTRDRAQDSPP

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-7768.69Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA
        MAENS++FGN+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   KV KCGVCGL+GHPNDKCP ++E+ N++R+YDPH NTYN+GWRDN NL+WGND 
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA

Query:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE
        Q+ TQA S+S+NQG+NLED++KA ATNT+SFQ +MKQQM+QLT AI K++GKGKLPAQPDHAN+SAISLRSGKIL+TP++ E+K+ S P+ L  +N+ KE
Subjt:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE

Query:  DNLENNTSSSSSKG
        + +++    ++  G
Subjt:  DNLENNTSSSSSKG

TrEMBL top hitse value%identityAlignment
A0A5A7VE49 Retrotransposon gag protein2.1e-7867.86Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA
        MAENSQ+F N+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGL+GHPNDK P+++E+ N++R+YDPHGNTYN+GWRDNP L+WGND 
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA

Query:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE
        Q+  QA S+S+NQG+NLED++KA A NT+SFQ EMKQQM+QLT AI K++GKGKLPAQP+HAN+SAISLRSGKIL+TP++ E+KV S  + L  +N+ KE
Subjt:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE

Query:  DNLENNTSSSSSKGTRDRAQDSPP
        +N+E N S S+ K  +    D  P
Subjt:  DNLENNTSSSSSKGTRDRAQDSPP

A0A5A7VQ60 Retrotransposon gag protein6.0e-7867.56Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGND
        MA+N Q+FGN+ASE DNSLTKEVSELKSQMLNM TTLLTSFVQG  +KV KCGVCGL+GH N+KCP+++E+ N++R+YDPH NTYN+GWRDNPNL+WGND
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGND

Query:  AQRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKK
         Q+ TQA S+S+NQG+NLED++KA ATNT+SFQ EMKQQM+QLT AI K++GKGKLPAQ DHAN+SAISLRSGKIL+TP++ E+KV S P+ L  +N+ K
Subjt:  AQRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKK

Query:  EDNLENNTSSSSSKGTRDRAQDSPP
        E+ +E N S S+SK  +    D  P
Subjt:  EDNLENNTSSSSSKGTRDRAQDSPP

A0A5D3CB46 Retrotransposon gag protein6.0e-7868.69Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA
        MAENS++FGN+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   KV KCGVCGL+GHPNDKCP ++E+ N++R+YDPH NTYN+GWRDN NL+WGND 
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA

Query:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE
        Q+ TQA S+S+NQG+NLED++KA ATNT+SFQ +MKQQM+QLT AI K++GKGKLPAQPDHAN+SAISLRSGKIL+TP++ E+K+ S P+ L  +N+ KE
Subjt:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE

Query:  DNLENNTSSSSSKG
        + +++    ++  G
Subjt:  DNLENNTSSSSSKG

A0A5D3CRR8 Retrotransposon gag protein6.0e-7861.15Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA
        MAENSQ+F N+ASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNPNL+WGND 
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA

Query:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE
        Q+ TQA S+S+NQG+NLED++KA ATNT+SFQ EMKQQM+QLT AI K++GKGKL AQ ++AN+SA+SLRSGKIL+TP++ E+K  S P+ L  +N+ KE
Subjt:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE

Query:  DNLENNTSSSSSKGTRDRAQDSPPKLEIRILRRKEYESCNNFRPRRKADQSLEEQKKSFR
        + +E N S  +SK  +    D  P      + +  + S     P++K     EE  + FR
Subjt:  DNLENNTSSSSSKGTRDRAQDSPPKLEIRILRRKEYESCNNFRPRRKADQSLEEQKKSFR

E5GBZ4 Retrotransposon gag protein1.9e-7968.3Show/hide
Query:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA
        M ENSQNFGN+A ELDN LTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNL+WGND 
Subjt:  MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDA

Query:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE
        Q+ TQA  +S+NQG+NLED++KA ATNT+SFQ EMKQQM+QLT AI K++GKGKLPAQPD+AN+SAISLRSGKIL+TP++ E+KV S  + L  +N+ KE
Subjt:  QRPTQATSSSNNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSS-EEKVPSNPILLVDENKKKE

Query:  DNLENNTSSSSSKGTRDRAQDSPP
        + +E N S S+SK  +    D  P
Subjt:  DNLENNTSSSSSKGTRDRAQDSPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGAACTCACAAAATTTTGGCAACCAAGCATCCGAGCTCGACAATTCCTTAACAAAAGAGGTTAGTGAACTTAAATCACAAATGTTAAATATGACTACATTGCT
CACTTCTTTTGTACAAGGCGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTCATTGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCA
TTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAAATGGGGAAATGACGCCCAACGACCCACACAAGCAACTTCATCCTCA
AATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTTTTGCTACCAACACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTGACCAATGCAATATG
CAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAACCCGATCACGCAAATATAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGCGAAGAAAAGG
TACCATCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGATAATTTAGAAAACAATACCTCTTCTTCTTCTTCAAAAGGAACCAGGGATCGAGCTCAAGAC
TCTCCCCCCAAACTTGAAATACGTATTCTTAGGAGAAAAGAATACGAGTCCTGTAATAATTTCAGACCAAGAAGAAAAGCTGATCAAAGTCTTGAAGAACAAAAGAAAAG
CTTTAGGATGGACTTTGGAGGACCTCAAAGAAGAAGGAACCAAAGACAAAGTCCAACCACAAAGGAGGCTGAACCCCATTTTGAGAAATGTCGTACTCAAAGAAATACTA
AAGCTCCAACCATGGGGATGAGCACGAAAACGCCTCCACCAGCCTATGCTTCGCGACGAATGCAAACCCAAAACGCCCAACAACAACTTGGGTTCCTTCCGGCGGCAAGG
GAGAGACGGAGAACTTCCAGAACGACGAAGCAAGGCGCGGAGCAAGGAAACTGGGAAGGAGAGAGCTTTCCGGCGGCTGAGAGCAAGGAAGAGAGAAGAAGAACTGAAAA
AGGAGAAAAGAAAGGGTTTAAGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGAACTCACAAAATTTTGGCAACCAAGCATCCGAGCTCGACAATTCCTTAACAAAAGAGGTTAGTGAACTTAAATCACAAATGTTAAATATGACTACATTGCT
CACTTCTTTTGTACAAGGCGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTCATTGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCA
TTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAAATGGGGAAATGACGCCCAACGACCCACACAAGCAACTTCATCCTCA
AATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTTTTGCTACCAACACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTGACCAATGCAATATG
CAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAACCCGATCACGCAAATATAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGCGAAGAAAAGG
TACCATCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGATAATTTAGAAAACAATACCTCTTCTTCTTCTTCAAAAGGAACCAGGGATCGAGCTCAAGAC
TCTCCCCCCAAACTTGAAATACGTATTCTTAGGAGAAAAGAATACGAGTCCTGTAATAATTTCAGACCAAGAAGAAAAGCTGATCAAAGTCTTGAAGAACAAAAGAAAAG
CTTTAGGATGGACTTTGGAGGACCTCAAAGAAGAAGGAACCAAAGACAAAGTCCAACCACAAAGGAGGCTGAACCCCATTTTGAGAAATGTCGTACTCAAAGAAATACTA
AAGCTCCAACCATGGGGATGAGCACGAAAACGCCTCCACCAGCCTATGCTTCGCGACGAATGCAAACCCAAAACGCCCAACAACAACTTGGGTTCCTTCCGGCGGCAAGG
GAGAGACGGAGAACTTCCAGAACGACGAAGCAAGGCGCGGAGCAAGGAAACTGGGAAGGAGAGAGCTTTCCGGCGGCTGAGAGCAAGGAAGAGAGAAGAAGAACTGAAAA
AGGAGAAAAGAAAGGGTTTAAGGGTTGA
Protein sequenceShow/hide protein sequence
MAENSQNFGNQASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWGNDAQRPTQATSSS
NNQGSNLEDLVKAFATNTISFQNEMKQQMSQLTNAICKLEGKGKLPAQPDHANISAISLRSGKILETPSSEEKVPSNPILLVDENKKKEDNLENNTSSSSSKGTRDRAQD
SPPKLEIRILRRKEYESCNNFRPRRKADQSLEEQKKSFRMDFGGPQRRRNQRQSPTTKEAEPHFEKCRTQRNTKAPTMGMSTKTPPPAYASRRMQTQNAQQQLGFLPAAR
ERRRTSRTTKQGAEQGNWEGESFPAAESKEERRRTEKGEKKGFKG