CuGenDBv2

Gene ID	PI0022506
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	vegetative cell wall protein gp1
Genome location	chr06:3810752..3811300
RNA-Seq Expression	PI0022506
Synteny	PI0022506
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597407.1 hypothetical protein SDJN03_10587, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-48

68.68

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Query:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD
        MSC+S FSFTLIRKTLP +Y   SSSN V P   SH +FLPF +   LSR LL G+SPEFP+   +P PS PLEIPQ S  PEIDP TP ELP +TP PD
Subjt:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD

Query:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM
        FP    P PPGP+ P PP+PSPPGIDVP+PPHKPPDIEPP PGSPVP PDILPPPPPE  PPRPPG EILTSPS P  +PP+
Subjt:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM

KGN56930.1 hypothetical protein Csa_011403 [Cucumis sativus]

3.5e-70

83.16

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Query:  MAVRMSCSSLFSFTLIRKTLPSFYPSSSNF-VTPFLFSHSQFLPFNDY-TSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS +SLFSFTLIRKTLPS+YP SSNF + PFLFSHSQFLPFN+Y  SLS SLLSG+SPEFP+IR VPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSCSSLFSFTLIRKTLPSFYPSSSNF-VTPFLFSHSQFLPFNDY-TSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPDFPPRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPP------GLEILTSPSPPGFVPPMYI
        PEP+FPPRPPGPEFP PPLPSPPGIDVPLPP KPP+IEPPWPGSPVP P+ILPP PPEEVPPRPP      G EILTS SPPGFV   YI
Subjt:  PEPDFPPRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPP------GLEILTSPSPPGFVPPMYI

TYK17238.1 hypothetical protein E5676_scaffold434G00890 [Cucumis melo var. makuwa]

4.9e-72

83.68

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Query:  MAVRMSCSSLFSFTLIRKTLPSFYPSSSNFVTPFLFSHSQFLPFNDY-TSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITP
        MAVRMSC+SLFSFTLI KTLPS+YPSSSNFVTP LFSHSQFL FN+Y TSLSRS+LSG+SPEFPK R VPPPS PLEIPQFSPPPEIDPSTPSELPSITP
Subjt:  MAVRMSCSSLFSFTLIRKTLPSFYPSSSNFVTPFLFSHSQFLPFNDY-TSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITP

Query:  EPDFP-PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPP------GLEILTSPSPPGFVPPMYI
        EPDFP PRPPGPEFP PP PSPPGIDVP+PP +PPDIEPPWPGSPVPGP+ILPP PPEE+PPRPP      G EILTSPSP  FVPP YI
Subjt:  EPDFP-PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPP------GLEILTSPSPPGFVPPMYI

XP_022949559.1 vegetative cell wall protein gp1 [Cucurbita moschata]

2.9e-48

68.68

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Query:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD
        MSC+S FSFTLIRKTLP +Y   SSSN V P   SH +FLPF +   LSR LL G+SPEFP+   +P PS PLEIPQ S  PEIDP TP ELP +TP PD
Subjt:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD

Query:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM
        FP    P PPGP+ P PP+PSPPGIDVP+PPHKPPDIEPP PGSPVP PDILPPPPPE  PPRPPG EILTSPS P  +PP+
Subjt:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM

XP_022975412.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]

3.4e-49

69.23

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Query:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD
        MSC+S FSFTLIRKTLP +Y   SSSN V P   SH +FLPF +   LSR LL G+SPEFP+   +P PS PLEIPQ S  PEIDP TP ELP ITP PD
Subjt:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD

Query:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM
        FP    P PPGP+FP PP+PSPPGIDVP+PPHKPPDIEPP PGSPVP PDILPPPPPE  PPRPPG EI TSPS P  +PP+
Subjt:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4M0 Uncharacterized protein

1.7e-70

83.16

Show/hide

Query:  MAVRMSCSSLFSFTLIRKTLPSFYPSSSNF-VTPFLFSHSQFLPFNDY-TSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS +SLFSFTLIRKTLPS+YP SSNF + PFLFSHSQFLPFN+Y  SLS SLLSG+SPEFP+IR VPPPSFPLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSCSSLFSFTLIRKTLPSFYPSSSNF-VTPFLFSHSQFLPFNDY-TSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPDFPPRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPP------GLEILTSPSPPGFVPPMYI
        PEP+FPPRPPGPEFP PPLPSPPGIDVPLPP KPP+IEPPWPGSPVP P+ILPP PPEEVPPRPP      G EILTS SPPGFV   YI
Subjt:  PEPDFPPRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPP------GLEILTSPSPPGFVPPMYI

A0A200Q4G4 Uncharacterized protein

3.7e-09

42.77

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Query:  YPSSSNFVTP------FLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTP---SELPSITPEPDFPPRPPGPEFPN
        YP  +N  T        + S SQ L +  Y S+S        PEFP       PSFP E+P    PPE+DP  P   +E P  TP PD     PGP+FP 
Subjt:  YPSSSNFVTP------FLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTP---SELPSITPEPDFPPRPPGPEFPN

Query:  PPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPS-PPGFVPP
        PPLPSPP  D+PLPP                 PDILPP PP+++PPRPPG  I+  PS PP  +PP
Subjt:  PPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPS-PPGFVPP

A0A5D3D162 Uncharacterized protein

2.4e-72

83.68

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Query:  MAVRMSCSSLFSFTLIRKTLPSFYPSSSNFVTPFLFSHSQFLPFNDY-TSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITP
        MAVRMSC+SLFSFTLI KTLPS+YPSSSNFVTP LFSHSQFL FN+Y TSLSRS+LSG+SPEFPK R VPPPS PLEIPQFSPPPEIDPSTPSELPSITP
Subjt:  MAVRMSCSSLFSFTLIRKTLPSFYPSSSNFVTPFLFSHSQFLPFNDY-TSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITP

Query:  EPDFP-PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPP------GLEILTSPSPPGFVPPMYI
        EPDFP PRPPGPEFP PP PSPPGIDVP+PP +PPDIEPPWPGSPVPGP+ILPP PPEE+PPRPP      G EILTSPSP  FVPP YI
Subjt:  EPDFP-PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPP------GLEILTSPSPPGFVPPMYI

A0A6J1GD64 vegetative cell wall protein gp1

1.4e-48

68.68

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Query:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD
        MSC+S FSFTLIRKTLP +Y   SSSN V P   SH +FLPF +   LSR LL G+SPEFP+   +P PS PLEIPQ S  PEIDP TP ELP +TP PD
Subjt:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD

Query:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM
        FP    P PPGP+ P PP+PSPPGIDVP+PPHKPPDIEPP PGSPVP PDILPPPPPE  PPRPPG EILTSPS P  +PP+
Subjt:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM

A0A6J1IL49 leucine-rich repeat extensin-like protein 3

1.7e-49

69.23

Show/hide

Query:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD
        MSC+S FSFTLIRKTLP +Y   SSSN V P   SH +FLPF +   LSR LL G+SPEFP+   +P PS PLEIPQ S  PEIDP TP ELP ITP PD
Subjt:  MSCSSLFSFTLIRKTLPSFY--PSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPD

Query:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM
        FP    P PPGP+FP PP+PSPPGIDVP+PPHKPPDIEPP PGSPVP PDILPPPPPE  PPRPPG EI TSPS P  +PP+
Subjt:  FP----PRPPGPEFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G43770.1 proline-rich family protein

1.9e-05

43.06

Show/hide

Query:  LFSHSQFLPFNDYTSLSRSLLSGNSP---EFPKIRHVPPPSFPLEIPQFSPPPEIDPS-TPSELPSI--TPEPDFPPRPPGPEFPNPPLPSPPGIDVPLP
        L ++S  + F   T        G SP   E P      P   PLE+P+    PEI PS TP E+ ++   P P  PP+ PGPEFP PP PSPP  D P P
Subjt:  LFSHSQFLPFNDYTSLSRSLLSGNSP---EFPKIRHVPPPSFPLEIPQFSPPPEIDPS-TPSELPSI--TPEPDFPPRPPGPEFPNPPLPSPPGIDVPLP

Query:  --PHKPPDIEPPWPGSPVPGPDILPP--PPPEEVPPRPPGLEIL
          P  PPD+ PP    P P PDI PP  PPP   PP P G  I+
Subjt:  --PHKPPDIEPPWPGSPVPGPDILPP--PPPEEVPPRPPGLEIL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGTAAGAATGTCCTGCAGTTCCCTCTTCTCTTTCACTCTCATCAGAAAAACGCTTCCTAGTTTTTACCCTTCTTCTTCCAATTTCGTCACCCCTTTCCTCTTTTC
CCATTCCCAATTCCTCCCCTTCAATGACTACACGTCTCTCTCGCGTTCTCTGCTTTCCGGTAACTCGCCGGAGTTTCCCAAAATCCGCCACGTTCCACCGCCTTCTTTTC
CCCTCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCGAGCACTCCGTCGGAGCTTCCGTCGATAACTCCGGAGCCGGATTTTCCTCCCCGGCCTCCAGGGCCA
GAGTTTCCGAATCCTCCATTGCCGTCTCCTCCTGGAATCGATGTACCGTTACCACCCCATAAGCCTCCAGATATAGAGCCACCGTGGCCTGGTTCGCCAGTACCAGGACC
AGACATTTTGCCGCCGCCGCCACCGGAGGAGGTGCCACCCAGACCTCCAGGTCTAGAGATATTGACGTCGCCGTCTCCACCTGGTTTTGTTCCTCCGATGTACATTTAA

mRNA sequence

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Protein sequence

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MAVRMSCSSLFSFTLIRKTLPSFYPSSSNFVTPFLFSHSQFLPFNDYTSLSRSLLSGNSPEFPKIRHVPPPSFPLEIPQFSPPPEIDPSTPSELPSITPEPDFPPRPPGP
EFPNPPLPSPPGIDVPLPPHKPPDIEPPWPGSPVPGPDILPPPPPEEVPPRPPGLEILTSPSPPGFVPPMYI

PI0022506 (gene) of Melon (PI 482460) v1 genome