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PI0022521 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022521
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein TAPETUM DETERMINANT 1
Genome locationchr10:4901360..4902352
RNA-Seq ExpressionPI0022521
SyntenyPI0022521
Gene Ontology termsNA
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010535235.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana]8.3e-2449.21Show/hide
Query:  SLLLFHLLLLSSFISTGGILV----NQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLP
        S++L  L+ +    STG   V     +C  N+I ISQ     L NGI T++V ITNQC   C+I D+HL CG FSS   I P +FKRL+ +DCLVN G P
Subjt:  SLLLFHLLLLSSFISTGGILV----NQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLP

Query:  IVYGQTLSFQYATTFMYPLSISSFKC
        + +G T+SFQYAT+F++PLS+SS +C
Subjt:  IVYGQTLSFQYATTFMYPLSISSFKC

XP_021908952.1 TPD1 protein homolog 1-like [Carica papaya]3.7e-2453.45Show/hide
Query:  LLLLSSFISTGGILVNQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQ
        LLL +      GI+  +C  + + I+QG    L NGI TY V I N C   C I ++HLKCG FSS   INP IFKRL+ DDCLVN G P+V G T+ FQ
Subjt:  LLLLSSFISTGGILVNQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQ

Query:  YATTFMYPLSISSFKC
        YA TFMYPLS+SS  C
Subjt:  YATTFMYPLSISSFKC

XP_022137731.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia]6.4e-2458Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C  + I I+QG    L  GI TY V + N C   C IY +H KCG FSS   INPR+FKRL  DDCLVN G P+VYG TLSFQYA TF YPLS+SS  C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC

XP_022137736.1 protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia]6.4e-2458Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C  + I I+QG    L  GI TY V + N C   C IY +H KCG FSS   INPR+FKRL  DDCLVN G P+VYG TLSFQYA TF YPLS+SS  C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC

XP_038893959.1 protein TAPETUM DETERMINANT 1-like [Benincasa hispida]3.7e-2459Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C  + I I+QG    L  GI TY V + N C   C IY +H KCG FSS   INPRIFKRL  DDCLVN G P+VYG TLSFQYA TF YPLS+SS  C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC

TrEMBL top hitse value%identityAlignment
A0A1S3B0P8 protein TAPETUM DETERMINANT 16.9e-2457Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C  + I I+QG    L  GI TY V + N C   C IY +H KCG FSS   INPR+FKRL  DDCLVN G P+VYG TLSFQYA T+ YPLS+SS  C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC

A0A2G9HYB9 Uncharacterized protein5.2e-2458.42Show/hide
Query:  NQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFK
        ++C  + I ISQG    L NGI TY V I N C   C I  +HL CG FSS   +NPRIFKRL  DDCLVN G P+V G+TLSFQYA TF YPLS+SS  
Subjt:  NQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFK

Query:  C
        C
Subjt:  C

A0A6J1C7I8 protein TAPETUM DETERMINANT 1-like isoform X23.1e-2458Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C  + I I+QG    L  GI TY V + N C   C IY +H KCG FSS   INPR+FKRL  DDCLVN G P+VYG TLSFQYA TF YPLS+SS  C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC

A0A6J1C840 protein TAPETUM DETERMINANT 1-like isoform X13.1e-2458Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C  + I I+QG    L  GI TY V + N C   C IY +H KCG FSS   INPR+FKRL  DDCLVN G P+VYG TLSFQYA TF YPLS+SS  C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC

A0A6J1JVY2 protein TAPETUM DETERMINANT 16.9e-2458Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C  + I I+QG    L  GI TY V + N C   C I+ +H KCG FSS   INPRIFKRL  DDCLVN G P+VYG TLSFQYA TF YPLS+SS  C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058353.1e-0534.13Show/hide
Query:  LLLFHLLLLSSFISTGGILVNQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRL--AVDDCLVNSGLPIVY
        LL   L LL   I +G I    CEG S   +  +    +     ++V + N+C   C I +L LKC  F   + ++P   + L  +  +C+VN GLP+  
Subjt:  LLLFHLLLLSSFISTGGILVNQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRL--AVDDCLVNSGLPIVY

Query:  GQTLSFQYATTFMY---PLSISSFKC
         QTLSF Y+ T  +   PLS  SF+C
Subjt:  GQTLSFQYATTFMY---PLSISSFKC

Q1G3T1 TPD1 protein homolog 12.5e-2347.41Show/hide
Query:  LLLSSFISTGGILVNQ-CEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQ
        LLLS  I  G   + Q C  + I + QG    L +G+ +Y V I N C   C I ++H+ CG FSS   +NPR+F+RL  DDCLVN G P+  GQ+LSFQ
Subjt:  LLLSSFISTGGILVNQ-CEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQ

Query:  YATTFMYPLSISSFKC
        YA +F YPLS++S  C
Subjt:  YATTFMYPLSISSFKC

Q2QR54 TPD1 protein homolog 1A5.4e-1841.51Show/hide
Query:  CEG-NSIAISQGEGGRLFNGISTYKVHITNQC------QHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLS
        C G + IAI QG    L +G+  Y V + N+C         C I  +H++CG FSS + ++PR+F+RL  DDCL+N G P++ G+T+SF+Y  +F Y LS
Subjt:  CEG-NSIAISQGEGGRLFNGISTYKVHITNQC------QHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLS

Query:  ISSFKC
        +S   C
Subjt:  ISSFKC

Q6TLJ2 Protein TAPETUM DETERMINANT 12.8e-2249Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C+   I ++Q     + NGI  Y V ITNQC   C I  +H+ CG FSS   INPR+FKR+  DDCLVN+G P+ +G TLSF YA TF Y LS++   C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC

Q8S6P9 TPD1 protein homolog 1B2.3e-1636.63Show/hide
Query:  NQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFK
        + C   ++ + Q     L +GI TY V I N C  +CT+YD+H+ CG F+S   ++P  F+R+  +DCLV  G  +   + +SFQY+ +F YPL++++  
Subjt:  NQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFK

Query:  C
        C
Subjt:  C

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein2.2e-0634.13Show/hide
Query:  LLLFHLLLLSSFISTGGILVNQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRL--AVDDCLVNSGLPIVY
        LL   L LL   I +G I    CEG S   +  +    +     ++V + N+C   C I +L LKC  F   + ++P   + L  +  +C+VN GLP+  
Subjt:  LLLFHLLLLSSFISTGGILVNQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRL--AVDDCLVNSGLPIVY

Query:  GQTLSFQYATTFMY---PLSISSFKC
         QTLSF Y+ T  +   PLS  SF+C
Subjt:  GQTLSFQYATTFMY---PLSISSFKC

AT1G32583.1 FUNCTIONS IN: molecular_function unknown1.8e-2447.41Show/hide
Query:  LLLSSFISTGGILVNQ-CEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQ
        LLLS  I  G   + Q C  + I + QG    L +G+ +Y V I N C   C I ++H+ CG FSS   +NPR+F+RL  DDCLVN G P+  GQ+LSFQ
Subjt:  LLLSSFISTGGILVNQ-CEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQ

Query:  YATTFMYPLSISSFKC
        YA +F YPLS++S  C
Subjt:  YATTFMYPLSISSFKC

AT4G24972.1 tapetum determinant 12.0e-2349Show/hide
Query:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC
        +C+   I ++Q     + NGI  Y V ITNQC   C I  +H+ CG FSS   INPR+FKR+  DDCLVN+G P+ +G TLSF YA TF Y LS++   C
Subjt:  QCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVYGQTLSFQYATTFMYPLSISSFKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTGCAACTTCTTCATTCTTTGGAGCTTCTCTTCTTCTATTCCATCTCCTTTTACTTTCTTCCTTTATTTCTACCGGTGGAATATTGGTAAACCAATGTGAAGG
AAATTCGATAGCAATAAGCCAAGGAGAAGGGGGACGACTGTTTAATGGAATCTCAACATATAAGGTGCATATAACAAACCAATGTCAGCACAGTTGCACTATATATGATC
TCCATCTCAAATGTGGATCCTTCAGCTCTTTTGCCTCAATAAATCCTCGCATCTTCAAGAGACTTGCAGTTGACGATTGTCTTGTCAACAGTGGATTGCCAATTGTCTAT
GGGCAAACTCTTTCCTTTCAATATGCTACTACCTTTATGTACCCTCTTTCGATTTCCTCTTTTAAATGTGGCCAATCTTAA
mRNA sequenceShow/hide mRNA sequence
GCAAAGATGGGTTTTGCAACTTCTTCATTCTTTGGAGCTTCTCTTCTTCTATTCCATCTCCTTTTACTTTCTTCCTTTATTTCTACCGGTGGAATATTGGTAAACCAATG
TGAAGGAAATTCGATAGCAATAAGCCAAGGAGAAGGGGGACGACTGTTTAATGGAATCTCAACATATAAGGTGCATATAACAAACCAATGTCAGCACAGTTGCACTATAT
ATGATCTCCATCTCAAATGTGGATCCTTCAGCTCTTTTGCCTCAATAAATCCTCGCATCTTCAAGAGACTTGCAGTTGACGATTGTCTTGTCAACAGTGGATTGCCAATT
GTCTATGGGCAAACTCTTTCCTTTCAATATGCTACTACCTTTATGTACCCTCTTTCGATTTCCTCTTTTAAATGTGGCCAATCTTAA
Protein sequenceShow/hide protein sequence
MGFATSSFFGASLLLFHLLLLSSFISTGGILVNQCEGNSIAISQGEGGRLFNGISTYKVHITNQCQHSCTIYDLHLKCGSFSSFASINPRIFKRLAVDDCLVNSGLPIVY
GQTLSFQYATTFMYPLSISSFKCGQS