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PI0022533 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022533
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:13816343..13816504
RNA-Seq ExpressionPI0022533
SyntenyPI0022533
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046849.1 retrotransposon protein [Cucumis melo var. makuwa]8.8e-1473.58Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ DD+DE DST+ TT S+DIHYI+TS+ WSQWRDELA++MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-1371.7Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE+MF+DWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.0e-1371.7Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ DD+DE DST+ATT ++DIHYIETS+ WS+WRD+LAE+MFSDWEL N
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]8.8e-1473.58Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE+MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]8.8e-1473.58Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE+MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

TrEMBL top hitse value%identityAlignment
A0A5A7U033 Retrotransposon protein4.3e-1473.58Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ DD+DE DST+ TT S+DIHYI+TS+ WSQWRDELA++MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5A7UIM7 Putative nuclease HARBI15.6e-1471.7Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE+MF+DWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5A7VJX3 Retrotransposon protein4.3e-1473.58Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE+MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5A7VLF4 Putative nuclease HARBI19.5e-1471.7Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ DD+DE DST+ATT ++DIHYIETS+ WS+WRD+LAE+MFSDWEL N
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5D3BL48 Putative nuclease HARBI14.3e-1473.58Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN D+ D++DE DST+ATT ++DIHYIETS+ WSQWRD+LAE+MFSDWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAATAATGACGTACCAGATGACGTTGATGAGGGTGACTCTACATATGCCACCACTGGCAGTGAAGATATTCATTACATAGAGACCTCGAGTGCGTGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAATAATGACGTACCAGATGACGTTGATGAGGGTGACTCTACATATGCCACCACTGGCAGTGAAGATATTCATTACATAGAGACCTCGAGTGCGTGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATTAG
Protein sequenceShow/hide protein sequence
MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWSQWRDELAEKMFSDWELRN