; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022543 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022543
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr08:960171..961487
RNA-Seq ExpressionPI0022543
SyntenyPI0022543
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032916.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.1e-9846.43Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF    
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

KAA0032923.1 polyprotein [Cucumis melo var. makuwa]1.8e-9946.67Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

KAA0050443.1 polyprotein [Cucumis melo var. makuwa]6.7e-9945.79Show/hide
Query:  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVA
        +T SKG    S+Q+ APS MSA+ YAMD  F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V 
Subjt:  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVA

Query:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTH
        P K F PRP I  YF K  ++ D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++
Subjt:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTH

Query:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV-----
        LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV-----

Query:  -NASTSSKSASSSIQEDDELASPEY---DLNDPFLDSQP
         N      ++ +S+ + D+L    Y   D+NDPFLD+QP
Subjt:  -NASTSSKSASSSIQEDDELASPEY---DLNDPFLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.1e-9846.19Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
             Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]3.0e-9946.67Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein8.5e-10046.67Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5A7SS94 Retrotransposable element Tf25.5e-9946.43Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF    
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5A7U3G5 Polyprotein3.2e-9945.79Show/hide
Query:  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVA
        +T SKG    S+Q+ APS MSA+ YAMD  F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V 
Subjt:  STSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVA

Query:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTH
        P K F PRP I  YF K  ++ D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++
Subjt:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTH

Query:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV-----
        LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV-----

Query:  -NASTSSKSASSSIQEDDELASPEY---DLNDPFLDSQP
         N      ++ +S+ + D+L    Y   D+NDPFLD+QP
Subjt:  -NASTSSKSASSSIQEDDELASPEY---DLNDPFLDSQP

A0A5A7V6D1 Retrotransposable element Tf25.5e-9946.19Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
             Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5D3DW87 Polyprotein1.4e-9946.67Show/hide
Query:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MSA+ YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTCGCTCCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGC
CCGATAAAAACGATTCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAA
CCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGTAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGC
CTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAA
CAATCCAGAAAAATTCATTTCACAACTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATG
TTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGTTATCTTCAAGATATCGA
TCAGAAAAAGAACACAGAGTTCCTGAACGATAAATCAAAGCTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATG
CCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTTCTCGACTCACAGCCCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTCGCTCCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAGAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGC
CCGATAAAAACGATTCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAA
CCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGTAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGC
CTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAA
CAATCCAGAAAAATTCATTTCACAACTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATG
TTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGTTATCTTCAAGATATCGA
TCAGAAAAAGAACACAGAGTTCCTGAACGATAAATCAAAGCTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATG
CCTCTACAAGCTCAAAATCAGCGTCTTCGTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTTCTCGACTCACAGCCCATGTGA
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSRIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDSSKIAYSKLKIFKAINPTHWNQGIFTEKSFSK
PFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKM
LVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNTEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPM