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PI0022549 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022549
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionG-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
Genome locationchr07:22283858..22284109
RNA-Seq ExpressionPI0022549
SyntenyPI0022549
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031982.1 hypothetical protein E6C27_scaffold134G00730 [Cucumis melo var. makuwa]6.0e-0947.95Show/hide
Query:  LNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQG-CGPVEVSEITTIMIGLMVIEGLECLNVWIESDVEV
        ++VDVAC PN++ +  GVV+ N+ G++V AQA FC+G    VE  +I  IM GL ++EGL C  VW++SD E+
Subjt:  LNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQG-CGPVEVSEITTIMIGLMVIEGLECLNVWIESDVEV
KAA0039613.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Cucumis melo var. makuwa]6.4e-1151.32Show/hide
Query:  MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDV
        MRGRLKLNVD+ACGPN   S VG VI + + D+VAAQ LFCQGCGPVE   +  + I    +   EC+ ++  S++
Subjt:  MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDV
TYK01692.1 hypothetical protein E5676_scaffold775G00140 [Cucumis melo var. makuwa]6.4e-1151.32Show/hide
Query:  MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDV
        MRGRLKLNVD+ACGPN   S VG VI + + D+VAAQ LFCQGCGPVE   +  + I    +   EC+ ++  S++
Subjt:  MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDV
TrEMBL top hitse value%identityAlignment
A0A5A7SLR6 RNase H domain-containing protein2.9e-0947.95Show/hide
Query:  LNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQG-CGPVEVSEITTIMIGLMVIEGLECLNVWIESDVEV
        ++VDVAC PN++ +  GVV+ N+ G++V AQA FC+G    VE  +I  IM GL ++EGL C  VW++SD E+
Subjt:  LNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQG-CGPVEVSEITTIMIGLMVIEGLECLNVWIESDVEV
A0A5A7T9F2 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-53.1e-1151.32Show/hide
Query:  MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDV
        MRGRLKLNVD+ACGPN   S VG VI + + D+VAAQ LFCQGCGPVE   +  + I    +   EC+ ++  S++
Subjt:  MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDV
A0A5D3BSC1 Uncharacterized protein3.1e-1151.32Show/hide
Query:  MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDV
        MRGRLKLNVD+ACGPN   S VG VI + + D+VAAQ LFCQGCGPVE   +  + I    +   EC+ ++  S++
Subjt:  MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGAGGCTTAAGCTTAACGTGGATGTGGCGTGTGGTCCAAACAGTCAAAGGTCGAGGGTGGGGGTTGTGATTTGCAATGAGCATGGTGATGTGGTGGCCGCTCA
AGCATTGTTCTGTCAAGGTTGTGGACCTGTTGAGGTGAGTGAAATTACAACTATTATGATAGGGCTAATGGTGATCGAAGGTCTGGAATGCTTGAATGTTTGGATTGAGT
CTGATGTGGAGGTTGTTGTGAAGCACTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGAGGCTTAAGCTTAACGTGGATGTGGCGTGTGGTCCAAACAGTCAAAGGTCGAGGGTGGGGGTTGTGATTTGCAATGAGCATGGTGATGTGGTGGCCGCTCA
AGCATTGTTCTGTCAAGGTTGTGGACCTGTTGAGGTGAGTGAAATTACAACTATTATGATAGGGCTAATGGTGATCGAAGGTCTGGAATGCTTGAATGTTTGGATTGAGT
CTGATGTGGAGGTTGTTGTGAAGCACTTCTAA
Protein sequenceShow/hide protein sequence
MRGRLKLNVDVACGPNSQRSRVGVVICNEHGDVVAAQALFCQGCGPVEVSEITTIMIGLMVIEGLECLNVWIESDVEVVVKHF