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PI0022568 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022568
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr01:10511025..10511213
RNA-Seq ExpressionPI0022568
SyntenyPI0022568
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045986.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-1066.13Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        M DV A+A M EMERKIN LMKVVE++D EI  + DQMKA ET E+S+T  +KANDKGK VL
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

KAA0058360.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.3e-1166.13Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        +TDV +KA MTEMERKIN LMKV+E++D +I  + DQM+  ETVE SQTFVVKA+DKGK V+
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

KAA0062572.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.3e-1064.52Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        M DV AK A+ EM+RKIN LMKVVE++DQEI  + DQMK  E  + S+T +VKANDKGKVVL
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

KAA0067627.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-1069.35Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        M  V  +A M EMERKIN LMKVVE+QD EI  + DQMKA ETVE+S+T  VKANDKGKVVL
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

TYK23838.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.1e-1067.74Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        M DV A+A M EMERKIN LMKVVE++D EI  + DQMKA+ET E SQT VVKA DKGK V+
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

TrEMBL top hitse value%identityAlignment
A0A5A7TV17 Ty3-gypsy retrotransposon protein1.5e-1066.13Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        M DV A+A M EMERKIN LMKVVE++D EI  + DQMKA ET E+S+T  +KANDKGK VL
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

A0A5A7UTB5 Ty3-gypsy retrotransposon protein3.0e-1166.13Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        +TDV +KA MTEMERKIN LMKV+E++D +I  + DQM+  ETVE SQTFVVKA+DKGK V+
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

A0A5A7V2X8 Ty3-gypsy retrotransposon protein2.6e-1064.52Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        M DV AK A+ EM+RKIN LMKVVE++DQEI  + DQMK  E  + S+T +VKANDKGKVVL
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

A0A5A7VKD9 Ty3-gypsy retrotransposon protein1.5e-1069.35Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        M  V  +A M EMERKIN LMKVVE+QD EI  + DQMKA ETVE+S+T  VKANDKGKVVL
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

A0A5D3DK07 Ty3-gypsy retrotransposon protein2.0e-1067.74Show/hide
Query:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL
        M DV A+A M EMERKIN LMKVVE++D EI  + DQMKA+ET E SQT VVKA DKGK V+
Subjt:  MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATGTAATAGCTAAGGCAGCCATGACAGAGATGGAGAGAAAAATAAATCTCCTAATGAAAGTTGTCGAGAAGCAAGATCAAGAAATCGTTGTCGTGGGAGATCA
AATGAAGGCTCATGAAACTGTTGAGATCAGCCAAACTTTTGTTGTCAAAGCCAATGATAAAGGGAAGGTTGTGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGATGTAATAGCTAAGGCAGCCATGACAGAGATGGAGAGAAAAATAAATCTCCTAATGAAAGTTGTCGAGAAGCAAGATCAAGAAATCGTTGTCGTGGGAGATCA
AATGAAGGCTCATGAAACTGTTGAGATCAGCCAAACTTTTGTTGTCAAAGCCAATGATAAAGGGAAGGTTGTGTTGTAG
Protein sequenceShow/hide protein sequence
MTDVIAKAAMTEMERKINLLMKVVEKQDQEIVVVGDQMKAHETVEISQTFVVKANDKGKVVL