; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022573 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022573
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:13073664..13074613
RNA-Seq ExpressionPI0022573
SyntenyPI0022573
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.7e-6379.05Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD
        LRQFGI+Q VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT +YI+WY+NI++LYIT+PGAA+ HLRSNN R R+VADD
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD

Query:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        PQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+
Subjt:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.6e-6379.05Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD
        LRQFGI+Q VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT +YINWY+NI++LYIT+PGA + HLRSNN R R+VADD
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD

Query:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        PQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+
Subjt:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.7e-6379.05Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD
        LRQFGI+Q VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT +YI+WY+NI++LYIT+PGAA+ HLRSNN R R+VADD
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD

Query:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        PQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+
Subjt:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-5965.41Show/hide
Query:  RLSGIRTKLSWIVCRISVRTVTTYGRRLVLSYVFTSTLRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTP
        R  G R +  + V R +   V+ Y  R +   +  S   QFGI+Q VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT 
Subjt:  RLSGIRTKLSWIVCRISVRTVTTYGRRLVLSYVFTSTLRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTP

Query:  KYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        +YI+WY+NI++LYIT+PGAA+ HLRSNN R R+VADD QQVL+ICN+NE+YMENIHYMYDVPIV APVQ+RR  VQEP++LEEV+
Subjt:  KYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.9e-6076.35Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD
        LRQFG  + VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT +YI+WY+NI++LYIT+PGAA+ HLRSNN+R R++ADD
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD

Query:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        PQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQE ++LEEV+
Subjt:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein2.3e-6379.05Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD
        LRQFGI+Q VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT +YI+WY+NI++LYIT+PGAA+ HLRSNN R R+VADD
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD

Query:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        PQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+
Subjt:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.8e-6379.05Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD
        LRQFGI+Q VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT +YINWY+NI++LYIT+PGA + HLRSNN R R+VADD
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD

Query:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        PQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+
Subjt:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.3e-6379.05Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD
        LRQFGI+Q VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT +YI+WY+NI++LYIT+PGAA+ HLRSNN R R+VADD
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD

Query:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        PQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+
Subjt:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-5965.41Show/hide
Query:  RLSGIRTKLSWIVCRISVRTVTTYGRRLVLSYVFTSTLRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTP
        R  G R +  + V R +   V+ Y  R +   +  S   QFGI+Q VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT 
Subjt:  RLSGIRTKLSWIVCRISVRTVTTYGRRLVLSYVFTSTLRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTP

Query:  KYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        +YI+WY+NI++LYIT+PGAA+ HLRSNN R R+VADD QQVL+ICN+NE+YMENIHYMYDVPIV APVQ+RR  VQEP++LEEV+
Subjt:  KYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.4e-6076.35Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD
        LRQFG  + VP DCNTEPLLHNIDLRTADW DRVAHLVMRW NR RF AT P  EQFD+DVT +YI+WY+NI++LYIT+PGAA+ HLRSNN+R R++ADD
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADD

Query:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
        PQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  VQE ++LEEV+
Subjt:  PQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE
SwissProt top hitse value%identityAlignment
Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog3.2e-0635.96Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLR---TADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYIT-----RPG
        LRQFG+ Q +P  C+ E  LH ID R     DW  R +  +  W  R   + +    E   +D    Y+ WYR ITR  I+     RPG
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLR---TADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYIT-----RPG
Arabidopsis top hitse value%identityAlignment
AT1G48120.1 hydrolases;protein serine/threonine phosphatases2.3e-0735.96Show/hide
Query:  LRQFGIKQDVPVDCNTEPLLHNIDLR---TADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYIT-----RPG
        LRQFG+ Q +P  C+ E  LH ID R     DW  R +  +  W  R   + +    E   +D    Y+ WYR ITR  I+     RPG
Subjt:  LRQFGIKQDVPVDCNTEPLLHNIDLR---TADWFDRVAHLVMRWLNRTRFIATRPSFEQFDVDVTPKYINWYRNITRLYIT-----RPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCAACTATGCGGACGAGCTTATGGTTCGAGGTACATGTTTGATCTTCTTCAACCTGATCAGATTATCTGGGATCCGTACAAAGCTGTCATGGATAGTTTGCCG
AATTTCTGTACGAACGGTCACGACATATGGCAGACGGTTAGTCCTCTCATATGTTTTCACATCAACACTTAGACAGTTTGGTATTAAACAAGATGTTCCAGTTGACTGTA
ATACTGAACCACTTTTGCACAACATTGACTTGAGAACGGCTGATTGGTTCGATAGAGTTGCTCATTTGGTGATGCGATGGCTAAATCGCACAAGATTTATTGCTACGAGA
CCTTCGTTTGAGCAATTTGATGTTGATGTAACTCCAAAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCTGCTGTAGGTCATCTGAG
GTCGAACAATAGTAGATTCCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAATGAGCGGTACATGGAGAACATACACTATATGTACGATGTAC
CTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCCAATGAATTGGAAGAAGTTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCATCAACTATGCGGACGAGCTTATGGTTCGAGGTACATGTTTGATCTTCTTCAACCTGATCAGATTATCTGGGATCCGTACAAAGCTGTCATGGATAGTTTGCCG
AATTTCTGTACGAACGGTCACGACATATGGCAGACGGTTAGTCCTCTCATATGTTTTCACATCAACACTTAGACAGTTTGGTATTAAACAAGATGTTCCAGTTGACTGTA
ATACTGAACCACTTTTGCACAACATTGACTTGAGAACGGCTGATTGGTTCGATAGAGTTGCTCATTTGGTGATGCGATGGCTAAATCGCACAAGATTTATTGCTACGAGA
CCTTCGTTTGAGCAATTTGATGTTGATGTAACTCCAAAATACATCAATTGGTACAGAAATATTACCAGGCTCTATATCACTCGACCGGGAGCTGCTGTAGGTCATCTGAG
GTCGAACAATAGTAGATTCCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAATGAGCGGTACATGGAGAACATACACTATATGTACGATGTAC
CTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCCAATGAATTGGAAGAAGTTGAATAA
Protein sequenceShow/hide protein sequence
MIINYADELMVRGTCLIFFNLIRLSGIRTKLSWIVCRISVRTVTTYGRRLVLSYVFTSTLRQFGIKQDVPVDCNTEPLLHNIDLRTADWFDRVAHLVMRWLNRTRFIATR
PSFEQFDVDVTPKYINWYRNITRLYITRPGAAVGHLRSNNSRFRDVADDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVE