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PI0022597 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022597
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:15726729..15727164
RNA-Seq ExpressionPI0022597
SyntenyPI0022597
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053666.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-3470.65Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG
        MAEK+ GC ++ +  IDYR+KT+KRTFQAIAEMR P CSGFGWNDE KCII EKELFDNWV+S+P  KG LN  FPYYD++ YV G+DRATG
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG

KAA0064022.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3268.48Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG
        MA+K+ GC ++ +  ID R+KT+KRTFQAIAEMR P CSGFGWNDE KCI+ EKELFDNWV+S+P  KG LN SFPYYD++ YV G+DRATG
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG

KAA0065929.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-3370.65Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG
        MAEK+ GC ++ +  ID R+KT+KRTFQAIAEMR P CSGFGWNDEVKCII EKELFDNWV+S+P  KG LN  FPYYD++ YV G+DRATG
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3269.57Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG
        MAEK+ GC ++ +  ID R+KT+KRTFQAIAEMR P CSGFGWNDE KCII EKELFDNWV+S+P  KG LN  FPYYD++ YV G+DRATG
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG

TYK04867.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-3460.36Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATGATQRHSPM
        MAEK+ GC ++ +  ID R+K +K+TFQ IAEMR P CSGFGWNDE KCII EKELFDNW++S+P  KG LN SF YYD++ YV G+D+AT  + RHSP 
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATGATQRHSPM

Query:  WGQMCLEGTRD
        WG   L G +D
Subjt:  WGQMCLEGTRD

TrEMBL top hitse value%identityAlignment
A0A5A7UHF7 Retrotransposon protein3.7e-3470.65Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG
        MAEK+ GC ++ +  IDYR+KT+KRTFQAIAEMR P CSGFGWNDE KCII EKELFDNWV+S+P  KG LN  FPYYD++ YV G+DRATG
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG

A0A5A7V6Q9 Retrotransposon protein5.4e-3368.48Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG
        MA+K+ GC ++ +  ID R+KT+KRTFQAIAEMR P CSGFGWNDE KCI+ EKELFDNWV+S+P  KG LN SFPYYD++ YV G+DRATG
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG

A0A5A7VES2 Retrotransposon protein5.4e-3369.57Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG
        MAEK+ GC ++ +  ID R+KT+KRTFQAIAEMR P CSGFGWNDE KCII EKELFDNWV+S+P  KG LN  FPYYD++ YV G+DRATG
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG

A0A5A7VKT2 Retrotransposon protein1.1e-3370.65Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG
        MAEK+ GC ++ +  ID R+KT+KRTFQAIAEMR P CSGFGWNDEVKCII EKELFDNWV+S+P  KG LN  FPYYD++ YV G+DRATG
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATG

A0A5D3BZA2 Retrotransposon protein1.7e-3460.36Show/hide
Query:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATGATQRHSPM
        MAEK+ GC ++ +  ID R+K +K+TFQ IAEMR P CSGFGWNDE KCII EKELFDNW++S+P  KG LN SF YYD++ YV G+D+AT  + RHSP 
Subjt:  MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATGATQRHSPM

Query:  WGQMCLEGTRD
        WG   L G +D
Subjt:  WGQMCLEGTRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGAAGATTTTAGGATGTAACATCCAGGGTTCGCCGACGATAGACTATCGGGTAAAAACCGTGAAGAGAACTTTCCAAGCCATTGCAGAAATGCGCAAGCCATT
GTGTAGTGGATTTGGTTGGAATGATGAAGTCAAGTGTATCATCACTGAGAAGGAATTGTTTGACAATTGGGTGAAGAGTTATCCTCCTACCAAGGGCTTCCTAAACAATT
CCTTTCCCTATTACGATGACATGTTCTATGTAGTTGGAAAAGATCGTGCGACGGGAGCCACACAGAGACATTCGCCGATGTGGGGTCAAATGTGTCTAGAGGGTACGAGA
GATTTCCCGTTGATGATGGAAACGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGAAGATTTTAGGATGTAACATCCAGGGTTCGCCGACGATAGACTATCGGGTAAAAACCGTGAAGAGAACTTTCCAAGCCATTGCAGAAATGCGCAAGCCATT
GTGTAGTGGATTTGGTTGGAATGATGAAGTCAAGTGTATCATCACTGAGAAGGAATTGTTTGACAATTGGGTGAAGAGTTATCCTCCTACCAAGGGCTTCCTAAACAATT
CCTTTCCCTATTACGATGACATGTTCTATGTAGTTGGAAAAGATCGTGCGACGGGAGCCACACAGAGACATTCGCCGATGTGGGGTCAAATGTGTCTAGAGGGTACGAGA
GATTTCCCGTTGATGATGGAAACGATATGA
Protein sequenceShow/hide protein sequence
MAEKILGCNIQGSPTIDYRVKTVKRTFQAIAEMRKPLCSGFGWNDEVKCIITEKELFDNWVKSYPPTKGFLNNSFPYYDDMFYVVGKDRATGATQRHSPMWGQMCLEGTR
DFPLMMETI