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PI0022606 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022606
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:14612191..14620377
RNA-Seq ExpressionPI0022606
SyntenyPI0022606
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040346.1 hypothetical protein E6C27_scaffold460G00510 [Cucumis melo var. makuwa]3.0e-1351.35Show/hide
Query:  VDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGRVVEELIKT
        +DNQNDEVRLR A+QGVIA MIS+MEALTDR +RLEIENRARERM PP +                         T  EE            VV E  K 
Subjt:  VDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGRVVEELIKT

Query:  SKGELNKKHLS
        SKGELNKKHL+
Subjt:  SKGELNKKHLS

KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]9.2e-3179.35Show/hide
Query:  VDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR
        ++NQNDEV+LR A+QGVIA+MIS+MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDD+QVTLL EPRRV HGVVR R
Subjt:  VDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR

KAA0047036.1 uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa]6.6e-2182.35Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR
        MEALTDRL+RLEIENRARERMPPPLA  + INHN+NQYEGDG D LDD+QVTLL EPRRV HGVVR R
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR

TYK09709.1 uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa]1.6e-2281.94Show/hide
Query:  MISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR
        MIS+MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDD+QVTLL EPRRV HGVVR R
Subjt:  MISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]2.0e-0945.56Show/hide
Query:  EVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPR----RVEHGVVRGR
        + R R A +G + +MI SMEALT+R+ RLE +N+A  R+PPP    V+   ++++YEGDGSD  +D+Q T+L  PR     V  G+ RGR
Subjt:  EVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPR----RVEHGVVRGR

TrEMBL top hitse value%identityAlignment
A0A5A7TE32 Uncharacterized protein1.4e-1351.35Show/hide
Query:  VDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGRVVEELIKT
        +DNQNDEVRLR A+QGVIA MIS+MEALTDR +RLEIENRARERM PP +                         T  EE            VV E  K 
Subjt:  VDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGRVVEELIKT

Query:  SKGELNKKHLS
        SKGELNKKHL+
Subjt:  SKGELNKKHLS

A0A5A7TK52 Retrotrans_gag domain-containing protein4.4e-3179.35Show/hide
Query:  VDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR
        ++NQNDEV+LR A+QGVIA+MIS+MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDD+QVTLL EPRRV HGVVR R
Subjt:  VDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR

A0A5A7TYI0 Uncharacterized protein3.2e-2182.35Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR
        MEALTDRL+RLEIENRARERMPPPLA  + INHN+NQYEGDG D LDD+QVTLL EPRRV HGVVR R
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR

A0A5D3CHG3 Retrotrans_gag domain-containing protein7.6e-2381.94Show/hide
Query:  MISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR
        MIS+MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDD+QVTLL EPRRV HGVVR R
Subjt:  MISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPRRVEHGVVRGR

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241159.6e-1045.56Show/hide
Query:  EVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPR----RVEHGVVRGR
        + R R A +G + +MI SMEALT+R+ RLE +N+A  R+PPP    V+   ++++YEGDGSD  +D+Q T+L  PR     V  G+ RGR
Subjt:  EVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDEQVTLLEEPR----RVEHGVVRGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGGCCCAATGACAAGAGCTAAAGCTAAAAAACTTCAAGATGGATTAAATACTAAATTTTTAGCATTTAATGACAAGTTGCAACAATTGGAATTTCAAGAGTC
ACTTGGACACCAAAAGGTGGACAATCAAAATGACGAAGTACGATTAAGAAACGCAAAACAAGGAGTTATTGCACAGATGATTAGTAGTATGGAAGCATTGACAGATCGTT
TGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGCCACCTCCTCTAGCACAGCATGTGGTAATTAACCATAATGACAACCAATATGAGGGTGATGGTTCTGAT
GGTTTAGACGATGAACAAGTTACATTACTTGAGGAGCCAAGACGTGTGGAACATGGAGTAGTTAGAGGAAGGGTCGTGGAAGAGCTTATCAAAACATCCAAAGGAGAGCT
CAACAAGAAGCACCTCAGTTCTTCTTCTCTCTTCCTTACTCTCAGCCACCGGAAAACTCTCTCCTCCCCAGTTTCCTTGCGCCGCGCTTTGTCTTCTCCGTTCGGTTGCT
CTCCGTCTTCCCTTGCCGCCGGGAAGAAGTTTTGGTTGTTACTGGGGCGTTCTGAGTTGTTCTCGCGAAGAGTAGCTTCGTGGTTCTTCGCCGTTCGTGTGGTTTTCGTC
TGCTCGCGTCTCGCCTGGTGTTTCTTGTTCGCGAGCTGGTTGTCTCGCTGCGACCTGAGGTCTTCTCGCCTCTTTCCTTCTTCGCAAGTTACTTGGTCAGGAGTCCTGCT
CGCCGAGGAGTCTGCGTTTGGACGTCTCCTCGCGTTTAGCCATCCTTGTCGCGTGGTGCTTGTGGACTTAACATCCGAGACTGAAAGGTGTGACCTTCGGGCGACCAGTT
TGAGTTGGAACTCCTTCGAGATTCCTAGACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAAGGCCCAATGACAAGAGCTAAAGCTAAAAAACTTCAAGATGGATTAAATACTAAATTTTTAGCATTTAATGACAAGTTGCAACAATTGGAATTTCAAGAGTC
ACTTGGACACCAAAAGGTGGACAATCAAAATGACGAAGTACGATTAAGAAACGCAAAACAAGGAGTTATTGCACAGATGATTAGTAGTATGGAAGCATTGACAGATCGTT
TGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGCCACCTCCTCTAGCACAGCATGTGGTAATTAACCATAATGACAACCAATATGAGGGTGATGGTTCTGAT
GGTTTAGACGATGAACAAGTTACATTACTTGAGGAGCCAAGACGTGTGGAACATGGAGTAGTTAGAGGAAGGGTCGTGGAAGAGCTTATCAAAACATCCAAAGGAGAGCT
CAACAAGAAGCACCTCAGTTCTTCTTCTCTCTTCCTTACTCTCAGCCACCGGAAAACTCTCTCCTCCCCAGTTTCCTTGCGCCGCGCTTTGTCTTCTCCGTTCGGTTGCT
CTCCGTCTTCCCTTGCCGCCGGGAAGAAGTTTTGGTTGTTACTGGGGCGTTCTGAGTTGTTCTCGCGAAGAGTAGCTTCGTGGTTCTTCGCCGTTCGTGTGGTTTTCGTC
TGCTCGCGTCTCGCCTGGTGTTTCTTGTTCGCGAGCTGGTTGTCTCGCTGCGACCTGAGGTCTTCTCGCCTCTTTCCTTCTTCGCAAGTTACTTGGTCAGGAGTCCTGCT
CGCCGAGGAGTCTGCGTTTGGACGTCTCCTCGCGTTTAGCCATCCTTGTCGCGTGGTGCTTGTGGACTTAACATCCGAGACTGAAAGGTGTGACCTTCGGGCGACCAGTT
TGAGTTGGAACTCCTTCGAGATTCCTAGACTTTGA
Protein sequenceShow/hide protein sequence
MPQGPMTRAKAKKLQDGLNTKFLAFNDKLQQLEFQESLGHQKVDNQNDEVRLRNAKQGVIAQMISSMEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSD
GLDDEQVTLLEEPRRVEHGVVRGRVVEELIKTSKGELNKKHLSSSSLFLTLSHRKTLSSPVSLRRALSSPFGCSPSSLAAGKKFWLLLGRSELFSRRVASWFFAVRVVFV
CSRLAWCFLFASWLSRCDLRSSRLFPSSQVTWSGVLLAEESAFGRLLAFSHPCRVVLVDLTSETERCDLRATSLSWNSFEIPRL