CuGenDBv2

Gene ID	PI0022609
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	30S ribosomal protein S7, chloroplastic
Genome location	chr01:13074650..13075139
RNA-Seq Expression	PI0022609
Synteny	PI0022609
Gene Ontology terms	GO:0000028 - ribosomal small subunit assembly (biological process) GO:0006412 - translation (biological process) GO:0009536 - plastid (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000235 - Ribosomal protein S5/S7 IPR023798 - Ribosomal protein S7 domain IPR036823 - Ribosomal protein S7 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AAN31973.1 ribosomal protein S7 [Narthecium ossifragum]

6.5e-39

69.23

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAIHGV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

OTF84493.1 putative ribosomal protein S7 domain protein [Helianthus annuus]

5.3e-41

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Query:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL
        +RRGTAEEK AKSDPIYRNRLVNMLIQQKTE NPLSVLRQAIHGV P IAVKA+R             STQGKALAI WLL ASRKRPGRNMAFKLSSEL
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL

Query:  VDAAKGSGNAIRKKEETHRL
        VDAAKGSG+AIRK+EETHR+
Subjt:  VDAAKGSGNAIRKKEETHRL

RYR25695.1 hypothetical protein Ahy_B02g059661 [Arachis hypogaea]

1.8e-41

80.83

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Query:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL
        +RRGT EEK AKSDPIYRNRLVNMLIQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLSSEL
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL

Query:  VDAAKGSGNAIRKKEETHRL
        VDAAKGSG+AIRKKEETHR+
Subjt:  VDAAKGSGNAIRKKEETHRL

RYR73952.1 hypothetical protein Ahy_A02g008535 [Arachis hypogaea]

2.2e-39

77.5

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Query:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL
        +RRGT EEK AKSDPIYRN+LVNMLIQQKTE NPLSVLRQAI GV PDIAVKA+              STQGKALAI WLLGASRK PGRNMAFKLSSEL
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL

Query:  VDAAKGSGNAIRKKEETHRL
        VDA KGSG+AIRKKEETHR+
Subjt:  VDAAKGSGNAIRKKEETHRL

YP_003540977.1 30S ribosomal protein S7 [Phoenix dactylifera]

6.5e-39

69.23

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAIHGV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

TrEMBL top hits

e value

%identity

Alignment

A0A143FVU5 Ribosomal protein S7

3.2e-39

69.23

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAIHGV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

A0A143FX40 Ribosomal protein S7

3.2e-39

69.23

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAIHGV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

A0A1Y3BXG4 Putative ribosomal protein S7 domain protein

2.6e-41

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Query:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL
        +RRGTAEEK AKSDPIYRNRLVNMLIQQKTE NPLSVLRQAIHGV P IAVKA+R             STQGKALAI WLL ASRKRPGRNMAFKLSSEL
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL

Query:  VDAAKGSGNAIRKKEETHRL
        VDAAKGSG+AIRK+EETHR+
Subjt:  VDAAKGSGNAIRKKEETHRL

A0A445AH05 Ribosomal_S7 domain-containing protein

8.9e-42

80.83

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Query:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL
        +RRGT EEK AKSDPIYRNRLVNMLIQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI WLLGASRKRPGRNMAFKLSSEL
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL

Query:  VDAAKGSGNAIRKKEETHRL
        VDAAKGSG+AIRKKEETHR+
Subjt:  VDAAKGSGNAIRKKEETHRL

A0A445EEJ8 Ribosomal_S7 domain-containing protein

1.1e-39

77.5

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Query:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL
        +RRGT EEK AKSDPIYRN+LVNMLIQQKTE NPLSVLRQAI GV PDIAVKA+              STQGKALAI WLLGASRK PGRNMAFKLSSEL
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAIHWLLGASRKRPGRNMAFKLSSEL

Query:  VDAAKGSGNAIRKKEETHRL
        VDA KGSG+AIRKKEETHR+
Subjt:  VDAAKGSGNAIRKKEETHRL

SwissProt top hits

e value

%identity

Alignment

A4QJG0 30S ribosomal protein S7, chloroplastic

7.2e-41

68.53

Show/hide

Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

A4QJP4 30S ribosomal protein S7, chloroplastic

7.2e-41

68.53

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

A4QK64 30S ribosomal protein S7, chloroplastic

7.2e-41

68.53

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

A4QKF1 30S ribosomal protein S7, chloroplastic

7.2e-41

68.53

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

P61841 30S ribosomal protein S7, chloroplastic

7.2e-41

68.53

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00900.1 Ribosomal protein S7p/S5e family protein

5.2e-42

68.53

Show/hide

Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

ATCG01240.1 ribosomal protein S7

5.2e-42

68.53

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Query:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI
        +RRGTAEEK AKSDPIYRNRLVNML                       IQQKTE NPLSVLRQAI GV PDIAVKA+R             STQGKALAI
Subjt:  TRRGTAEEKIAKSDPIYRNRLVNML-----------------------IQQKTEKNPLSVLRQAIHGVNPDIAVKAKR-------------STQGKALAI

Query:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL
         WLLGASRKRPGRNMAFKLSSELVDAAKGSG+AIRKKEETHR+
Subjt:  HWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETHRL

Sequences

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CDS sequence

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ATGCCTCAACAACCCACACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGATTCAACAAAAGACAGAAAA
AAATCCACTATCTGTTTTACGTCAAGCAATACATGGAGTAAATCCCGATATAGCAGTAAAGGCAAAACGATCCACACAAGGAAAAGCACTTGCCATTCATTGGTTATTGG
GGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCAATGCCATACGTAAAAAGGAAGAGACTCAC
AGATTATTCGTTGGTAGAATGGAAAGAATTAGGCGAAGAAGGATCCGTAGGTAA

mRNA sequence

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Protein sequence

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MPQQPTRRGTAEEKIAKSDPIYRNRLVNMLIQQKTEKNPLSVLRQAIHGVNPDIAVKAKRSTQGKALAIHWLLGASRKRPGRNMAFKLSSELVDAAKGSGNAIRKKEETH
RLFVGRMERIRRRRIRR

PI0022609 (gene) of Melon (PI 482460) v1 genome