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PI0022613 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022613
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:13105841..13106050
RNA-Seq ExpressionPI0022613
SyntenyPI0022613
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041225.1 uncharacterized protein E6C27_scaffold128G001860 [Cucumis melo var. makuwa]1.1e-1672.06Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L+E  SY+K+EESGTSDGS MK+KGKM E++ITGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

KAA0046359.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]6.1e-1569.12Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L++  SY+K+EESGTSDGS MK+KGKM E+++TGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

KAA0063363.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-1569.12Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L+E  SY+K+EESGTS+ S MK+KGKM E++ITGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

KAA0065995.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.7e-1569.12Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L+E  SY+ +EESGTSD S MK+KGKM E++ITGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

TYK16028.1 uncharacterized protein E5676_scaffold32G00230 [Cucumis melo var. makuwa]1.1e-1672.06Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L+E  SY+K+EESGTSDGS MK+KGKM E++ITGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

TrEMBL top hitse value%identityAlignment
A0A5A7TII1 Uncharacterized protein5.4e-1772.06Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L+E  SY+K+EESGTSDGS MK+KGKM E++ITGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

A0A5A7TYN3 Ty3/gypsy retrotransposon protein3.0e-1569.12Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L++  SY+K+EESGTSDGS MK+KGKM E+++TGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

A0A5A7VJU2 Ty3/gypsy retrotransposon protein2.3e-1569.12Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L+E  SY+ +EESGTSD S MK+KGKM E++ITGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

A0A5D3CXP0 Uncharacterized protein5.4e-1772.06Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L+E  SY+K+EESGTSDGS MK+KGKM E++ITGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

A0A5D3DXK6 Retrotransposon protein1.7e-1569.12Show/hide
Query:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM
        M+ERLE TEKEVL LKEMMLEMKK+ DRL+++L+E  SY+K+EESGTS+ S MK+KGKM E++ITGE+
Subjt:  MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAACGACTGGAAAATACAGAGAAAGAAGTCCTGGGTTTGAAAGAGATGATGCTGGAAATGAAGAAGACTTTCGATCGGCTATCTGAAGACCTGAAGGAGGGAAG
TTCTTACAGGAAAAGAGAGGAATCAGGTACCTCCGATGGTTCCACCATGAAGCTGAAAGGGAAGATGAACGAGTCTGAGATTACTGGGGAGATGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAACGACTGGAAAATACAGAGAAAGAAGTCCTGGGTTTGAAAGAGATGATGCTGGAAATGAAGAAGACTTTCGATCGGCTATCTGAAGACCTGAAGGAGGGAAG
TTCTTACAGGAAAAGAGAGGAATCAGGTACCTCCGATGGTTCCACCATGAAGCTGAAAGGGAAGATGAACGAGTCTGAGATTACTGGGGAGATGGGTTGA
Protein sequenceShow/hide protein sequence
MDERLENTEKEVLGLKEMMLEMKKTFDRLSEDLKEGSSYRKREESGTSDGSTMKLKGKMNESEITGEMG