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PI0022640 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022640
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAP-5 complex subunit beta-1
Genome locationchr10:4465142..4468233
RNA-Seq ExpressionPI0022640
SyntenyPI0022640
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016197 - endosomal transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030119 - AP-type membrane coat adaptor complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067550.1 AP-5 complex subunit beta-1 [Cucumis melo var. makuwa]9.8e-1785.19Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
XP_008466491.1 PREDICTED: uncharacterized protein LOC103503880 [Cucumis melo]9.8e-1785.19Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
XP_011654553.1 uncharacterized protein LOC101219595 [Cucumis sativus]2.2e-1683.33Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGSLV+SYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
XP_022989857.1 AP-5 complex subunit beta-1 [Cucurbita maxima]5.4e-1581.48Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGS VSSYKRNMGHFHILIFLPPRFHLLFQMEVSD S
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
XP_038876028.1 uncharacterized protein LOC120068363 [Benincasa hispida]9.8e-1785.19Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
TrEMBL top hitse value%identityAlignment
A0A0A0KJ67 AP-5 complex subunit beta-11.1e-1683.33Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGSLV+SYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
A0A1S3CRD3 AP-5 complex subunit beta-14.8e-1785.19Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
A0A5D3BDX5 AP-5 complex subunit beta-14.8e-1785.19Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
A0A6J1GY96 AP-5 complex subunit beta-13.4e-1579.63Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGS +SSYKRNMGHFHILIFLPPRFHLLFQMEVSD S
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
A0A6J1JGZ1 AP-5 complex subunit beta-12.6e-1581.48Show/hide
Query:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        ++ +   R TYFSNEDEMGS VSSYKRNMGHFHILIFLPPRFHLLFQMEVSD S
Subjt:  NIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19870.1 unknown protein3.5e-0436.36Show/hide
Query:  VNIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS
        V + +   R TY    D+    ++  +  MG   +L+FLPPR+HL+F+MEV   S
Subjt:  VNIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHILIFLPPRFHLLFQMEVSDFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTGAGGCAGGTGGTTTTCATTTCGGAGAGGTTGGAGAAAAAAGTCAGCGAGATCCTCACCCTGCTCCATGGTCTGAAAATGGTGGAGATGTTGGATGATGGGGT
GGTGTTCGTGGAATCAGATGGTCAAAATGCTTTAGAATTTGGCCTTTTTGTGTTTCCTAGATGGTTGGACCTGGTTGTGGACAAGGATAGGGAGGGTGGTGGAGATGCTT
GTGGAGTTAATATTGGAAAGTCAGATTCCCGTCATACATATTTTTCAAATGAAGATGAAATGGGAAGTCTTGTCAGTAGTTATAAGAGAAACATGGGGCACTTCCATATT
TTGATATTTCTTCCACCAAGGTTTCACCTTCTCTTTCAGATGGAAGTTTCGGATTTTTCGAGGAGATGCTTGTGGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTGAGGCAGGTGGTTTTCATTTCGGAGAGGTTGGAGAAAAAAGTCAGCGAGATCCTCACCCTGCTCCATGGTCTGAAAATGGTGGAGATGTTGGATGATGGGGT
GGTGTTCGTGGAATCAGATGGTCAAAATGCTTTAGAATTTGGCCTTTTTGTGTTTCCTAGATGGTTGGACCTGGTTGTGGACAAGGATAGGGAGGGTGGTGGAGATGCTT
GTGGAGTTAATATTGGAAAGTCAGATTCCCGTCATACATATTTTTCAAATGAAGATGAAATGGGAAGTCTTGTCAGTAGTTATAAGAGAAACATGGGGCACTTCCATATT
TTGATATTTCTTCCACCAAGGTTTCACCTTCTCTTTCAGATGGAAGTTTCGGATTTTTCGAGGAGATGCTTGTGGAGTTAA
Protein sequenceShow/hide protein sequence
MLVRQVVFISERLEKKVSEILTLLHGLKMVEMLDDGVVFVESDGQNALEFGLFVFPRWLDLVVDKDREGGGDACGVNIGKSDSRHTYFSNEDEMGSLVSSYKRNMGHFHI
LIFLPPRFHLLFQMEVSDFSRRCLWS