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PI0022650 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022650
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:692388..693351
RNA-Seq ExpressionPI0022650
SyntenyPI0022650
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038975.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-4165.6Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WT+EE+  LVECL+ELVS  GW+SDNGTFRPGY + L RM+AE++ G  + ATT IDCRIKT+KR FQAI+EMRGP  SGFGWNDE KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        I+AEK+LFD+WV+   A +   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

KAA0052259.1 retrotransposon protein [Cucumis melo var. makuwa]5.1e-4265.6Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WTKEE+  LVECL+ELVS  GW+SDNGTFRPGY + L RM+AE++ G+ + ATT IDCRIKT+KR FQAI+E+RGP  SGFGWNDE KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        I+AEK+LFD+WV+   A +   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

KAA0058870.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-4166.4Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WTKEE+  LVECL+EL+S  GW+ DNGTFRPGY + L  M+AE++RG  + ATT IDCRIKT+KR FQAI EMRGPT SGFGWNDE KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        IIAEK+LFD+WV+  +A +   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

KAA0062964.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-4265.6Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WT+EE+  LVECL+ELVS  GW+SDNGTFRPGY + L RM+AE++ G  + ATT IDCRIKT+KR FQAI+EMRGP  SGFGWNDE KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        I+AEK+LFD+WV+   A++   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

KAA0065929.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-4267.2Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WTKEE+  LVECL+ELVS  GW+SDNGTFRPGY + L RM+AE++ G  + ATT IDCRIKT+KR FQAI+EMRGP  SGFGWNDE+KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        IIAEK+LFD+WV+   A +   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

TrEMBL top hitse value%identityAlignment
A0A5A7UFK7 Retrotransposon protein2.5e-4265.6Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WTKEE+  LVECL+ELVS  GW+SDNGTFRPGY + L RM+AE++ G+ + ATT IDCRIKT+KR FQAI+E+RGP  SGFGWNDE KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        I+AEK+LFD+WV+   A +   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

A0A5A7V6W3 Retrotransposon protein4.2e-4265.6Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WT+EE+  LVECL+ELVS  GW+SDNGTFRPGY + L RM+AE++ G  + ATT IDCRIKT+KR FQAI+EMRGP  SGFGWNDE KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        I+AEK+LFD+WV+   A++   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

A0A5A7VKT2 Retrotransposon protein8.4e-4367.2Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WTKEE+  LVECL+ELVS  GW+SDNGTFRPGY + L RM+AE++ G  + ATT IDCRIKT+KR FQAI+EMRGP  SGFGWNDE+KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        IIAEK+LFD+WV+   A +   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

A0A5D3CWL2 Retrotransposon protein7.1e-4265.6Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WT+EE+  LVECL+ELVS  GW+SDNGTFRPGY + L RM+AE++ G  + ATT IDCRIKT+KR FQAI+EMRGP  SGFGWNDE KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        I+AEK+LFD+WV+   A +   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

A0A5D3DJA6 Retrotransposon protein5.5e-4266.4Show/hide
Query:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC
        M TS+RAP+H WTKEE+  LVECL+EL+S  GW+ DNGTFRPGY + L  M+AE++RG  + ATT IDCRIKT+KR FQAI EMRGPT SGFGWNDE KC
Subjt:  MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATT-IDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKC

Query:  IIAEKDLFDSWVKVRVALQRWPNKP
        IIAEK+LFD+WV+  +A +   NKP
Subjt:  IIAEKDLFDSWVKVRVALQRWPNKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACGTCTTCAAGGGCCCCCAAGCACCACTGGACGAAAGAGGAAGATTTCGTCCTCGTTGAATGTCTGGTGGAGTTGGTATCTTTCGACGGGTGGAGGTCGGATAA
CGGGACTTTTAGACCCGGATACCATAGTCATCTACAGAGAATGATTGCCGAGAGGATGCGCGGACATAACATAACGGCTACGACAATAGATTGTCGGATCAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAGATGAGGGGCCCGACGTATAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTTGACAGTTGG
GTGAAGGTGAGGGTAGCTCTTCAGCGCTGGCCCAATAAGCCTCCCACTTCAGGGGTAAGACCGGGTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAACGTCTTCAAGGGCCCCCAAGCACCACTGGACGAAAGAGGAAGATTTCGTCCTCGTTGAATGTCTGGTGGAGTTGGTATCTTTCGACGGGTGGAGGTCGGATAA
CGGGACTTTTAGACCCGGATACCATAGTCATCTACAGAGAATGATTGCCGAGAGGATGCGCGGACATAACATAACGGCTACGACAATAGATTGTCGGATCAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAGATGAGGGGCCCGACGTATAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTTGACAGTTGG
GTGAAGGTGAGGGTAGCTCTTCAGCGCTGGCCCAATAAGCCTCCCACTTCAGGGGTAAGACCGGGTGGATAG
Protein sequenceShow/hide protein sequence
MVTSSRAPKHHWTKEEDFVLVECLVELVSFDGWRSDNGTFRPGYHSHLQRMIAERMRGHNITATTIDCRIKTMKRAFQAISEMRGPTYSGFGWNDELKCIIAEKDLFDSW
VKVRVALQRWPNKPPTSGVRPGG