CuGenDBv2

Gene ID	PI0022661
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	RNA-binding protein
Genome location	chr10:19489889..19492768
RNA-Seq Expression	PI0022661
Synteny	PI0022661
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601448.1 Galactoside 2-alpha-L-fucosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-89

90.81

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTITLPEDVYVKKFFQ+HPDSKY DA++FC F+PPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAMA+A+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNP+IK IAQRLKEE AAEMQ+RM+G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]

7.8e-89

90.27

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTITLPEDVYV+KFFQ+HPDSKY DA++FC F+PPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAMA+A+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNP+IK IAQRLKEE AAEMQ+RM+G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]

2.7e-89

90.81

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTITLPEDVYVKKFFQ+HPDSKY DA++FC F+PPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAMA+A+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNP+IK IAQRLKEE AAEMQ+RM+G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

XP_022996766.1 uncharacterized protein LOC111491881 [Cucurbita maxima]

3.9e-88

89.19

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL++TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG +KTITLPEDVYVKKFFQ+HPDSKY DA++FC F+PPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAMA+A+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNP+IK IAQRLKEE AAEMQ+RM+G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

XP_038891818.1 uncharacterized protein LOC120081194 [Benincasa hispida]

6.6e-88

90.76

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTKTRKLVKGLAKAEP+WLKAMEQAPPPTFPRVDGT+KTI LPEDVYVKKFFQ+HPDSKY DA++FC F+PPPARIFGLRVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQ
        EAMALA+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEER FVRDRFFNP+IK IAQRLKEE AAEMQER Q
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQQ3 Uncharacterized protein

1.9e-85

88.65

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPP+FPRVDGTIKTITLPEDVYVKKFF++HPDS YHDA++FC FNPPPARIF  RVLELKEQGV+EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAM +A+MEYRAEKKMKK AYSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+P+IK IAQRLKEE AAEMQER  G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

A0A1S3BEG4 uncharacterized protein LOC103489146

4.3e-85

88.11

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDG ++ ITLPEDVYVKKFFQ+HPDS YHDA++F DFNP PARIF  RVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAMA A+MEYRAEKKMKKKAYSRLKQIARLQGKKPPPNP+PSAIK+IQAEERK+VRDRFFNP+IK IAQRLKEE AAEMQER +G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

A0A6J1DDQ7 uncharacterized protein LOC111019147

3.2e-88

89.73

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Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL +TRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTI+LPEDVYVKKFFQ+HPDSKY DA++FC F+PPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAMA+A+MEYRAEKK+KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNP+IK IAQRLKEE AAEMQ+RM+G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

A0A6J1GZF0 uncharacterized protein LOC111458914

1.3e-89

90.81

Show/hide

Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTITLPEDVYVKKFFQ+HPDSKY DA++FC F+PPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAMA+A+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNP+IK IAQRLKEE AAEMQ+RM+G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

A0A6J1KC52 uncharacterized protein LOC111491881

1.9e-88

89.19

Show/hide

Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL++TRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DG +KTITLPEDVYVKKFFQ+HPDSKY DA++FC F+PPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        EAMA+A+MEYRAEKK KKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNP+IK IAQRLKEE AAEMQ+RM+G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26750.1 unknown protein

5.8e-50

52.97

Show/hide

Query:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE
        MS+MKGDLL+KTR+LV GLA  EPVWLKAME +PPP FPR +G I+ I LPED YV+KF  +HP +K  D  +   F P  AR++G RVLELKE G+SE 
Subjt:  MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEE

Query:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG
        +AM++A+MEY +E+K  KKAY RLK++A +Q K PPP PYPSA K +  + +   +DRF  P ++ +  +LK E    +Q+R  G
Subjt:  EAMALAHMEYRAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQG

Sequences

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CDS sequence

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ATGTCCTTCATGAAAGGAGACTTGCTAACTAAGACTAGGAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAGCAGGCGCCACCTCCTAC
ATTTCCCCGAGTAGATGGAACAATTAAGACAATCACTCTTCCTGAGGATGTATATGTAAAAAAGTTCTTCCAGAGACATCCAGACTCAAAATACCACGATGCCGTCAGGT
TCTGTGATTTCAATCCTCCTCCAGCCCGAATATTTGGGTTGAGGGTGCTTGAACTGAAGGAACAAGGTGTCAGTGAGGAGGAGGCCATGGCTCTAGCCCATATGGAATAC
CGGGCAGAGAAAAAGATGAAAAAGAAGGCGTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAGCCTCCTCCTAACCCTTATCCAAGTGCTATAAAGGAGAT
ACAAGCCGAGGAAAGGAAATTCGTTCGGGATCGTTTCTTCAATCCCCAGATTAAAGCAATTGCACAAAGGTTGAAGGAGGAGAATGCAGCTGAAATGCAGGAAAGAATGC
AAGGCCGCCAGTGA

mRNA sequence

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ATCCAAACGAACTTAAACCAATTATTTTTAAGTACACTCAACCAAAATTTTGGCTTAGATTGAATTCATTTTCTAATAAAGGTTTTGGTTAAGAAGATTTATAAGAACCG
GACCCAATCCGATGGGATCGGTTTCCAACTGGTCCGGGCAGCTCGATTTCCGGCGGTTTCCTTCCAATAAGCCGTCTTGTTGTTGCCCAATTCTCGAACTAAGAGATTAG
CTGAAGGATCTCTCTCTAGTTTCATCTTCATCGTATCTTCTGATTATTGGATCTAATCACAATCCAAGAAGGAGGGAGCCATGTCCTTCATGAAAGGAGACTTGCTAACT
AAGACTAGGAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTGTTTGGCTCAAAGCCATGGAGCAGGCGCCACCTCCTACATTTCCCCGAGTAGATGGAACAATTAAGAC
AATCACTCTTCCTGAGGATGTATATGTAAAAAAGTTCTTCCAGAGACATCCAGACTCAAAATACCACGATGCCGTCAGGTTCTGTGATTTCAATCCTCCTCCAGCCCGAA
TATTTGGGTTGAGGGTGCTTGAACTGAAGGAACAAGGTGTCAGTGAGGAGGAGGCCATGGCTCTAGCCCATATGGAATACCGGGCAGAGAAAAAGATGAAAAAGAAGGCG
TACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAGCCTCCTCCTAACCCTTATCCAAGTGCTATAAAGGAGATACAAGCCGAGGAAAGGAAATTCGTTCGGGA
TCGTTTCTTCAATCCCCAGATTAAAGCAATTGCACAAAGGTTGAAGGAGGAGAATGCAGCTGAAATGCAGGAAAGAATGCAAGGCCGCCAGTGATAGAATATTCCATTCT
CCCATCCCTGCTTCTGGAAACTAGCTTTCGCAATAATTTGACAGTTCAGTAATTGAGAATACAACATGATTTTTAGATTCAAGTGAACACCATATCTGAAGCATTGGTTC
AAGTATGTTAAAAGATTTTTCTTTTGATATTATTCAATTATTCGATGGCTGACCCTCTCAGAAGGTGGATGCGCACCTTGATAAATGTTCGATCAACTTTTAATCATATT
GATCCAATTCTATATACATCAGTTTTTTTATATATTACATTTTTTTTACATTGAAACATATAGGAATCCAGAGATAATTGTATAATAGACCTCAATCTAGAAATTTTAAA
TGTTTTTTTTTTTCTGTTACTTGAAACTTGAGAATTTTGCTCTCTTGCTTACATCATCAATTCAAAGTTCAAAACCACCTCTCAATTTTTTTTTTCTCTTTGTTCTCAAT
TTTCCTTCGTCCATTTGTGCAGATCATTCTTCATCTTCTCTTTCTCTATTTGCCGTCAGTGATTGAAATGTTGCTTTAAATGCTAGATGTACTGGACTGAGAGATTGGAG

Protein sequence

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MSFMKGDLLTKTRKLVKGLAKAEPVWLKAMEQAPPPTFPRVDGTIKTITLPEDVYVKKFFQRHPDSKYHDAVRFCDFNPPPARIFGLRVLELKEQGVSEEEAMALAHMEY
RAEKKMKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPQIKAIAQRLKEENAAEMQERMQGRQ

PI0022661 (gene) of Melon (PI 482460) v1 genome