; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022670 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022670
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionsignal recognition particle 19 kDa protein
Genome locationchr08:15500037..15503276
RNA-Seq ExpressionPI0022670
SyntenyPI0022670
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54616.2 hypothetical protein Csa_018066 [Cucumis sativus]4.1e-6899.26Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPA-SSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPA SSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPA-SSSTAGPSKGKGGRKKK

XP_004147628.1 signal recognition particle 19 kDa protein [Cucumis sativus]4.6e-6797.01Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

XP_004147903.1 signal recognition particle 19 kDa protein [Cucumis sativus]4.1e-6899.26Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPA-SSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPA SSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPA-SSSTAGPSKGKGGRKKK

XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]1.6e-6797.01Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]2.4e-6898.51Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein2.2e-6797.01Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

A0A1S3AYC2 signal recognition particle 19 kDa protein7.6e-6897.01Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein6.5e-6796.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGE+PNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSK-GKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSK-GKGGRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein3.8e-6796.27Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein2.9e-6797.01Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein7.2e-2348.85Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSST---AGPSKGKGGRKK
        +   RT+K   A  S     G  KGKG +KK
Subjt:  RHPGRTKKQEPASSST---AGPSKGKGGRKK

P49964 Signal recognition particle 19 kDa protein1.8e-5073.44Show/hide
Query:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPR
        +IK+W V+YP+Y+NSKKT+AEGRRI   KAC +PTCVEI DCC HLK+P AIE+DKAYPRDF Q GRVRV LKK+DG+  NPAI ++KQLM++IAELVP+
Subjt:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPR

Query:  HPGRTKKQEPASSSTAGPSKGKGGRKKK
        H GRTKKQEPA+SSTAG SKGKGG+KKK
Subjt:  HPGRTKKQEPASSSTAGPSKGKGGRKKK

Q5RBR1 Signal recognition particle 19 kDa protein7.2e-2348.85Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSST---AGPSKGKGGRKK
        +   RT+K   A  S     G  KGKG +KK
Subjt:  RHPGRTKKQEPASSST---AGPSKGKGGRKK

Q943Z6 Signal recognition particle 19 kDa protein4.0e-5069.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C+EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK
        AELVPRHP R KKQE          A++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK

Q9D7A6 Signal recognition particle 19 kDa protein3.2e-2348.09Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML +AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQ---EPASSSTAGPSKGKGGRKK
        +   RT+K    +P      G  KGKG +KK
Subjt:  RHPGRTKKQ---EPASSSTAGPSKGKGGRKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative2.9e-5169.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C+EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK
        AELVPRHP R KKQE          A++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTACTGTATCCCATCTATATTAATTCAAAGAAGACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCATG
TGAGAATCCTACGTGTGTTGAGATTGGGGATTGCTGCGGTCATCTCAAACTGCCTTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTCATGCAAAGAGGGAGAG
TGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCCAGAAAACAACTGATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGAAGG
ACAAAGAAGCAGGAGCCTGCATCATCATCAACTGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
CTCGGACCGGCCAAATTTATTACTTACAGGTTCCCGGTTCAACCCCACCTTCGTCTTACGATTCCAAGTCTTCCATCTCCGTCGCCTCGTCTCTCCGTCATCCAGTTTCA
GTCTCCCTGATAGTCACGGTCTCAGCTGTTCTTCATTGTGTGAGGCATGCAAATCTTAAATTTTTGCTTTGATCTGTTTGACGAATTTGTAAATTTTAAATATTTTTCTT
TTAGGATTATTACGATGTTTGTGTTTGTTTGAAGTGTGTAATTGATATCATTATGAGATTTTAGTTAGTAGTCATGTGTTGTAGACAGAATTAAGTATTTTACACCCTTA
GCTGAGGGGTAGTTAGACCAATTTTACTAGGGTTCTTGTACCAAATATCCCATCGAACAATTTTATCATTCAAACAAGTGATGAAAACTAATGTGGTTGTTGGTCTTGTA
CATGGAGCAGTGTTAGGCTTGATTTGTTTAAAAAATGAACGACCAACATCGCAAGTACCTGTAATTATACGAGAACCATGGTGAATTGGTATAAGAATCCTTCGGTTAGG
GGTGTTAAGGGGTTATAACTACTTTTGCAAAATGGATATATGCACACTTAGGTATATAATAAGTTGAAGAGACTATTAACAAGTTTTGTTTCTTACCAAACAAATAAATA
AAAAGTAAAAGAGATTTTCTTAAATAATAAACAATCGATTATAATTTAGTTAATTTCTTTTTATTTGTATCATTTCTCGATATATGTGTGTCATCCTTGTGCAGTGGCGA
TACTATGTGTATCGTTCCAATTTTATCTAATGTCTCTGAAGGGACGACAAATTTGCGTTAATGATACTGGGTTGCACATTTTCTCTTTTTCTATGTGTTTCTGCTTTTTA
GCTCAATCTATAGGCAAGTACCTGTGTCTACTATACCTCAGCTGAATCTGTATTATGCCAAATAGTTCTGTTATTTAATGCTCGAAGCTGGAAATCTCACTGAATTTTCA
ATTCGTAATGGCCCAATTTGGTGGTCAGATAAACAAAAACTGAAATGAGTTGAACAGTTTCTTGTCAAGACGCAAGAGAACAGTTTTATGAGTGTCTGAAGAATATATTT
ATTTTTTGCCCTATATATGATTGAATATGATTTGTAATGGGTATCTTTCATGTGCCATCGTAGGAATTTGGTTGGAACATGGATGGAGAAATTCCCAACATAAAGAGATG
GGTAGTACTGTATCCCATCTATATTAATTCAAAGAAGACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCATGTGAGAATCCTACGTGTGTTGAGATTGGGGATT
GCTGCGGTCATCTCAAACTGCCTTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCTGCTGAAGAAGGAGGATGGAACT
CTGTCTAATCCAGCTATTACTTCCAGAAAACAACTGATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGAAGGACAAAGAAGCAGGAGCCTGCATCATCATCAAC
TGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAGTTACAATACATAATTACAAGAAACAGATTGTTATCGACCAGGCAAGCGGTTTCGTTTTTACATCTCG
TTTCTTAATTCTTAGTGACATTTAAGTACTGGTGTTCTGCTCCGGCCCCCAACGAAACTAGACAATCGGTTTGTTTTGAACAATTTTGTAAAATAGTGGATCCTGGAGGT
TTTTTTACTGAGATAGGAGAAAAGTGGATGAGAATTAGGTTTGAATTATTCAATCTTTTGCCTAAATCCTTATAGGTGAAATAACCTATCTATGAACATGGTTTTCATGT
TTGGAGATTGAAAAATGTGGAAATTTCCAATACTTTGTTGTCATGGTCAGAATGTGGAAGTATGAAAATTTTGACACTTTTGCTTATAA
Protein sequenceShow/hide protein sequence
MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPRHPGR
TKKQEPASSSTAGPSKGKGGRKKK