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PI0022740 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022740
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr03:15721096..15721338
RNA-Seq ExpressionPI0022740
SyntenyPI0022740
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004197 - cysteine-type endopeptidase activity (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008445 - D-aspartate oxidase activity (molecular function)
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP71307.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cajanus cajan]5.9e-2673.42Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSD++E CIEVFMDDFT+Y           + +LNRCIETNLVLN+EKCHFMV HGIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

RYA56915.1 hypothetical protein DD596_25350, partial [Enterobacter cloacae complex sp. 4DZ3-28B]5.9e-2675.95Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSDF+E CIEVFMDDFTVY           E++LNRCIETNLVLN+EKCHFMV  GIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

RZB41284.1 Transposon Ty3-G Gag-Pol polyprotein [Glycine soja]5.9e-2675.95Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSDF+E CIEVFMDDFTVY           E++LNRCIETNLVLN+EKCHFMV  GIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

RZC25552.1 Transposon Ty3-G Gag-Pol polyprotein [Glycine soja]5.9e-2675.95Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSDF+E CIEVFMDDFTVY           E++LNRCIETNLVLN+EKCHFMV  GIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

WP_165295147.1 RNA-directed DNA polymerase, partial [Enterobacter cloacae complex sp. 4DZ3-28B]5.9e-2675.95Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSDF+E CIEVFMDDFTVY           E++LNRCIETNLVLN+EKCHFMV  GIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

TrEMBL top hitse value%identityAlignment
A0A151T1R1 Retrovirus-related Pol polyprotein from transposon 17.64.9e-2674.68Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSDF+E CIEVFMDDFTVY           +++LNRCIETNLVLN+EKCHFMV  GIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

A0A151TW73 Retrovirus-related Pol polyprotein from transposon 17.62.8e-2673.42Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSD++E CIEVFMDDFT+Y           + +LNRCIETNLVLN+EKCHFMV HGIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

A0A445EY74 Reverse transcriptase2.8e-2675.95Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSDF+E CIEVFMDDFTVY           E++LNRCIETNLVLN+EKCHFMV  GIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

A0A445FCZ8 Reverse transcriptase3.7e-2675.95Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSDF+E CIEVFMDDFTVY           E++LNRCIETNLVLN+EKCHFMV  GIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

A0A445LR48 Transposon Ty3-G Gag-Pol polyprotein2.8e-2675.95Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGLCNAPGTFQRCM+SIFSDF+E CIEVFMDDFTVY           E++LNRCIETNLVLN+EKCHFMV  GIVLG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.8e-0636.71Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQILNRCIET-----------NLVLNYEKCHFMVSHGIVLG
        MPFGL NAP TFQRCM  I    + K   V++DD  V+   L+  +++           NL L  +KC F+      LG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQILNRCIET-----------NLVLNYEKCHFMVSHGIVLG

P20825 Retrovirus-related Pol polyprotein from transposon 2971.4e-0634.18Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGL NAP TFQRCM +I    + K   V++DD  ++           + +  +  + NL L  +KC F+      LG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVY-----------EQILNRCIETNLVLNYEKCHFMVSHGIVLG

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein2.3e-0432.91Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQ-----------ILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGL NAP TF R M   F D   + + V++DD  ++ +           +L R    NL++  +KC F       LG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQ-----------ILNRCIETNLVLNYEKCHFMVSHGIVLG

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus2.9e-0434.18Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQ-----------ILNRCIETNLVLNYEKCHFMVSHGIVLG
        +PFGL NAP  FQR +  I  + I K   V++DD  V+ +           +L    + NL +N EK HF+ +    LG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQ-----------ILNRCIETNLVLNYEKCHFMVSHGIVLG

Q99315 Transposon Ty3-G Gag-Pol polyprotein2.3e-0432.91Show/hide
Query:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQ-----------ILNRCIETNLVLNYEKCHFMVSHGIVLG
        MPFGL NAP TF R M   F D   + + V++DD  ++ +           +L R    NL++  +KC F       LG
Subjt:  MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQ-----------ILNRCIETNLVLNYEKCHFMVSHGIVLG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTGGATTATGTAATGCACCTGGCACATTCCAACGTTGCATGATGAGTATATTCTCCGATTTTATAGAAAAATGTATAGAAGTCTTTATGGATGATTTTACTGT
GTATGAACAAATTCTAAATAGATGCATAGAAACCAATTTAGTGTTAAACTATGAAAAATGTCATTTTATGGTTTCTCATGGCATAGTTCTAGGCATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTGGATTATGTAATGCACCTGGCACATTCCAACGTTGCATGATGAGTATATTCTCCGATTTTATAGAAAAATGTATAGAAGTCTTTATGGATGATTTTACTGT
GTATGAACAAATTCTAAATAGATGCATAGAAACCAATTTAGTGTTAAACTATGAAAAATGTCATTTTATGGTTTCTCATGGCATAGTTCTAGGCATCTAG
Protein sequenceShow/hide protein sequence
MPFGLCNAPGTFQRCMMSIFSDFIEKCIEVFMDDFTVYEQILNRCIETNLVLNYEKCHFMVSHGIVLGI