; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022758 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022758
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:12018957..12027585
RNA-Seq ExpressionPI0022758
SyntenyPI0022758
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036824.1 uncharacterized protein E6C27_scaffold20G001240 [Cucumis melo var. makuwa]4.4e-1836.65Show/hide
Query:  IAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEEPHQGKDKCS
        +++YN RVL+I NES  LGEKI + K+       L R+FDIKVT IEE NDI+TLKLDELFG L TFK+T  D+  KKGK +AF S   +E   G  +  
Subjt:  IAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEEPHQGKDKCS

Query:  DESLVQRCCGKFNKHPSNYKGQYNRDLGNYSSASFASYPTENRRENVGDLCVDQWQEDQELKVAHAQ--YDTMSKSMQMLNSNMNDLNIILQVEKTSINK
        D+++        N        +   D    S  S     T  + E +       W+ED ELK+   Q   D + K ++MLNS   +L+ IL+  +   ++
Subjt:  DESLVQRCCGKFNKHPSNYKGQYNRDLGNYSSASFASYPTENRRENVGDLCVDQWQEDQELKVAHAQ--YDTMSKSMQMLNSNMNDLNIILQVEKTSINK

Query:  KGVGFSEAKDKSISKKNVKTV
         G+GF  +  +  +   +K V
Subjt:  KGVGFSEAKDKSISKKNVKTV

KAA0038159.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.3e-1956.86Show/hide
Query:  ITNQETIAEYNVRVLDIANESFALGEKIVEPKLLL-------RRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEEPHQ
        +T +ETI EYNVRVL+IANESF LGEKI E KL++       ++FD+KV  IEE +DI TLKLDELFG + TF++T  D+ DKK K +AF SV +EE   
Subjt:  ITNQETIAEYNVRVLDIANESFALGEKIVEPKLLL-------RRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEEPHQ

Query:  GK
         K
Subjt:  GK

KAA0051798.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.0e-1850.88Show/hide
Query:  RITNQETIAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE--
        ++T  ET++EYN RVL+IAN+S  LGEKI E K+       L R+FD+KVT IEE  DI+TLKLDELFG L TF++   D+  KKGK +AF S+ D+E  
Subjt:  RITNQETIAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE--

Query:  -PHQGKDKCSDESL
            G +   DES+
Subjt:  -PHQGKDKCSDESL

KAA0052224.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.3e-1959.79Show/hide
Query:  ITNQETIAEYNVRVLDIANESFALGEKIVEPKLLLR-------RFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE
        +T +E IAEYNVRVL+IANESF LGEKI E KL+ +       +FD+KVTTIEE +DI TLKLDELFG L TF++   ++ DKKGK + F SV +EE
Subjt:  ITNQETIAEYNVRVLDIANESFALGEKIVEPKLLLR-------RFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE

TYK21443.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.0e-1850.88Show/hide
Query:  RITNQETIAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE--
        ++T  ET++EYN RVL+IAN+S  LGEKI E K+       L R+FD+KVT IEE  DI+TLKLDELFG L TF++   D+  KKGK +AF S+ D+E  
Subjt:  RITNQETIAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE--

Query:  -PHQGKDKCSDESL
            G +   DES+
Subjt:  -PHQGKDKCSDESL

TrEMBL top hitse value%identityAlignment
A0A5A7SZY3 Reverse transcriptase Ty1/copia-type domain-containing protein2.1e-1836.65Show/hide
Query:  IAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEEPHQGKDKCS
        +++YN RVL+I NES  LGEKI + K+       L R+FDIKVT IEE NDI+TLKLDELFG L TFK+T  D+  KKGK +AF S   +E   G  +  
Subjt:  IAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEEPHQGKDKCS

Query:  DESLVQRCCGKFNKHPSNYKGQYNRDLGNYSSASFASYPTENRRENVGDLCVDQWQEDQELKVAHAQ--YDTMSKSMQMLNSNMNDLNIILQVEKTSINK
        D+++        N        +   D    S  S     T  + E +       W+ED ELK+   Q   D + K ++MLNS   +L+ IL+  +   ++
Subjt:  DESLVQRCCGKFNKHPSNYKGQYNRDLGNYSSASFASYPTENRRENVGDLCVDQWQEDQELKVAHAQ--YDTMSKSMQMLNSNMNDLNIILQVEKTSINK

Query:  KGVGFSEAKDKSISKKNVKTV
         G+GF  +  +  +   +K V
Subjt:  KGVGFSEAKDKSISKKNVKTV

A0A5A7T9Y1 Gag-pol polyprotein1.1e-1956.86Show/hide
Query:  ITNQETIAEYNVRVLDIANESFALGEKIVEPKLLL-------RRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEEPHQ
        +T +ETI EYNVRVL+IANESF LGEKI E KL++       ++FD+KV  IEE +DI TLKLDELFG + TF++T  D+ DKK K +AF SV +EE   
Subjt:  ITNQETIAEYNVRVLDIANESFALGEKIVEPKLLL-------RRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEEPHQ

Query:  GK
         K
Subjt:  GK

A0A5A7U931 Gag-pol polyprotein9.6e-1950.88Show/hide
Query:  RITNQETIAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE--
        ++T  ET++EYN RVL+IAN+S  LGEKI E K+       L R+FD+KVT IEE  DI+TLKLDELFG L TF++   D+  KKGK +AF S+ D+E  
Subjt:  RITNQETIAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE--

Query:  -PHQGKDKCSDESL
            G +   DES+
Subjt:  -PHQGKDKCSDESL

A0A5A7UA40 Gag-pol polyprotein1.1e-1959.79Show/hide
Query:  ITNQETIAEYNVRVLDIANESFALGEKIVEPKLLLR-------RFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE
        +T +E IAEYNVRVL+IANESF LGEKI E KL+ +       +FD+KVTTIEE +DI TLKLDELFG L TF++   ++ DKKGK + F SV +EE
Subjt:  ITNQETIAEYNVRVLDIANESFALGEKIVEPKLLLR-------RFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE

A0A5D3DCZ8 Gag-pol polyprotein9.6e-1950.88Show/hide
Query:  RITNQETIAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE--
        ++T  ET++EYN RVL+IAN+S  LGEKI E K+       L R+FD+KVT IEE  DI+TLKLDELFG L TF++   D+  KKGK +AF S+ D+E  
Subjt:  RITNQETIAEYNVRVLDIANESFALGEKIVEPKL-------LLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKLTFDDKGDKKGKSLAFHSVSDEE--

Query:  -PHQGKDKCSDESL
            G +   DES+
Subjt:  -PHQGKDKCSDESL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTCTGGAGGTCGGGAACGAAGGAACATACAAGGGAAAAAAGAGGAGAATGAGCTTCTTGGGCCGTCTCGGGGTCATGTTCGCCGAGACTTGAAGCAAGAAAG
ATTTTTTAAGGTTTCTCGAGCCATCTCGGGGGCGTGTTCGACCAAGCCTGAAAATAGAGAAGGCATAGCCAAAGCAAGAGGGTGTTTTGGTCAAGCTTTGGTTTGGGGTT
TTCTGTTAAAGGGCATCCAAAAATTTAAGGGTTTTGACAAATTTGAGCTGAAGAAGAAGAGTAAGAGCTTAAGGTTTGAATCCAAGAGCTCGTTTGAGCTAGGGCAAGTT
TTGTTGAAGTGGTTTCAAGCAAGCCAAGGTTATCGAGACTCCAAAGAGATCAAGGGTCGACAAGTATCGTTAGAAGGAGACGTTGTTGGTTGGCTTTACGTCGCTGTCTC
GAGCCTAGTGAGGAGAATAACAAATCAAGAGACTATTGCGGAGTACAATGTACGTGTCTTGGATATAGCCAATGAGTCATTTGCTCTTGGTGAGAAGATTGTTGAACCTA
AGCTGCTACTAAGACGTTTTGATATAAAAGTTACTACAATTGAGGAAACTAATGACATAGTCACCTTGAAATTGGATGAGCTATTTGGTTATCTACGTACGTTCAAACTG
ACGTTTGATGATAAGGGTGACAAGAAGGGTAAAAGTCTGGCTTTCCACTCGGTGAGTGATGAAGAACCTCATCAAGGGAAAGACAAATGCAGCGATGAAAGTCTAGTTCA
ACGATGTTGTGGCAAGTTCAATAAACATCCCAGTAATTATAAAGGACAATATAATAGAGATCTTGGAAACTATAGTAGTGCGAGTTTTGCTTCGTACCCTACTGAAAATA
GGAGAGAGAATGTTGGTGATTTATGTGTTGACCAGTGGCAAGAGGACCAGGAACTGAAAGTTGCTCATGCACAGTATGATACCATGTCTAAATCTATGCAAATGCTCAAC
TCCAACATGAATGATCTAAACATAATTCTACAGGTCGAGAAGACCAGTATTAATAAAAAGGGTGTTGGTTTCTCTGAAGCAAAGGATAAATCAATTTCTAAGAAAAACGT
CAAGACTGTTTTTGTTCAGGCTCAAGAGAAGAGTCCTATCAAGACTAGTATGATAACTGCGAGATCGAATTTGCCTTGTAAAGGTGCTATTGAGACCAAGCGAAGTGAGA
GGTGGGAAGACGATAGAACGATACTATTGGAGTCGAGTATCAGTATTCAGGATACTCAAGATAGATCACAAGTTGCTCCGAATGTTAATAGCTCCAGTAACAACATTGGT
GTCATAGGTGTTATGAAAGATCCTGATAGTGCATCACAGGAGGTGTCTGAAGCTGATAGCTTCAATGATAGCATAGGAGATCGGGTGTCTGCAGAAAGCCACAACGATGG
TTTAACCACCTCTAATGTTGAGGTACCGTCGGTGATAACTCGCATATTGCGTGATAATTGCGTTTTAAGTGTTTTGCACGCTGAAATAAGGCGAAGAGAGTGTTCTAGGC
GATCAGCGTTGCAATTAGGCGTTCAAGGAACCATCTGGCGAAAAGCCAACACATTACTATGTGATGCTGACGCGCAAAGAGACAAGAATGGCTTAGGCGAGCTAATTCGC
TTGGCCAGCGTTGGTCGCCAACTACTCAAGAGAGTAAGTAGCAAGGACATGGCTAAGCATGCGTGGAATGAAGTTTGGAAACAAACTTCATTCTGGCGTTTTAACTCCGT
CATTTACATTCTGAGAGGAAAATTTTCCTGTGTTCGACCCTGGATCACCCCAGGAAACCTCTTGCTTCGCTTATACTTGGGCGAACAAGAGGAAAACTTGTGCGATAAAG
ATCACGATCGCCTAATCATCATGTTTACCATCACTTCTGATTGTGACCTGCATAAAGCTACTTCTGATACTCGTGTGCCTAAAAGGACAAACGTTGCTAAGCCAATGATG
GACTCTGTCTTTGTTAACCCTGCTAATCATGCTACTGTTGCTCCTGAAAGTCATCCTGTTGTTGATACTTCTGCTTTTGACTATGTTGCTAATTCTGTTGTCGCACCAAA
AGAAAGGCACTCTGGTTGCGTTCCCTCATCAACGGGTGCAGGTGACAACAACTCTGTGCCCTCTAGTGCTCTTGCTTTAGGGTTTCCTCCATCTACTCGTTATGTTGAGT
CTCCAAGTGATGATCATTATGATTCATTTGATGATGATCACTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTCTGGAGGTCGGGAACGAAGGAACATACAAGGGAAAAAAGAGGAGAATGAGCTTCTTGGGCCGTCTCGGGGTCATGTTCGCCGAGACTTGAAGCAAGAAAG
ATTTTTTAAGGTTTCTCGAGCCATCTCGGGGGCGTGTTCGACCAAGCCTGAAAATAGAGAAGGCATAGCCAAAGCAAGAGGGTGTTTTGGTCAAGCTTTGGTTTGGGGTT
TTCTGTTAAAGGGCATCCAAAAATTTAAGGGTTTTGACAAATTTGAGCTGAAGAAGAAGAGTAAGAGCTTAAGGTTTGAATCCAAGAGCTCGTTTGAGCTAGGGCAAGTT
TTGTTGAAGTGGTTTCAAGCAAGCCAAGGTTATCGAGACTCCAAAGAGATCAAGGGTCGACAAGTATCGTTAGAAGGAGACGTTGTTGGTTGGCTTTACGTCGCTGTCTC
GAGCCTAGTGAGGAGAATAACAAATCAAGAGACTATTGCGGAGTACAATGTACGTGTCTTGGATATAGCCAATGAGTCATTTGCTCTTGGTGAGAAGATTGTTGAACCTA
AGCTGCTACTAAGACGTTTTGATATAAAAGTTACTACAATTGAGGAAACTAATGACATAGTCACCTTGAAATTGGATGAGCTATTTGGTTATCTACGTACGTTCAAACTG
ACGTTTGATGATAAGGGTGACAAGAAGGGTAAAAGTCTGGCTTTCCACTCGGTGAGTGATGAAGAACCTCATCAAGGGAAAGACAAATGCAGCGATGAAAGTCTAGTTCA
ACGATGTTGTGGCAAGTTCAATAAACATCCCAGTAATTATAAAGGACAATATAATAGAGATCTTGGAAACTATAGTAGTGCGAGTTTTGCTTCGTACCCTACTGAAAATA
GGAGAGAGAATGTTGGTGATTTATGTGTTGACCAGTGGCAAGAGGACCAGGAACTGAAAGTTGCTCATGCACAGTATGATACCATGTCTAAATCTATGCAAATGCTCAAC
TCCAACATGAATGATCTAAACATAATTCTACAGGTCGAGAAGACCAGTATTAATAAAAAGGGTGTTGGTTTCTCTGAAGCAAAGGATAAATCAATTTCTAAGAAAAACGT
CAAGACTGTTTTTGTTCAGGCTCAAGAGAAGAGTCCTATCAAGACTAGTATGATAACTGCGAGATCGAATTTGCCTTGTAAAGGTGCTATTGAGACCAAGCGAAGTGAGA
GGTGGGAAGACGATAGAACGATACTATTGGAGTCGAGTATCAGTATTCAGGATACTCAAGATAGATCACAAGTTGCTCCGAATGTTAATAGCTCCAGTAACAACATTGGT
GTCATAGGTGTTATGAAAGATCCTGATAGTGCATCACAGGAGGTGTCTGAAGCTGATAGCTTCAATGATAGCATAGGAGATCGGGTGTCTGCAGAAAGCCACAACGATGG
TTTAACCACCTCTAATGTTGAGGTACCGTCGGTGATAACTCGCATATTGCGTGATAATTGCGTTTTAAGTGTTTTGCACGCTGAAATAAGGCGAAGAGAGTGTTCTAGGC
GATCAGCGTTGCAATTAGGCGTTCAAGGAACCATCTGGCGAAAAGCCAACACATTACTATGTGATGCTGACGCGCAAAGAGACAAGAATGGCTTAGGCGAGCTAATTCGC
TTGGCCAGCGTTGGTCGCCAACTACTCAAGAGAGTAAGTAGCAAGGACATGGCTAAGCATGCGTGGAATGAAGTTTGGAAACAAACTTCATTCTGGCGTTTTAACTCCGT
CATTTACATTCTGAGAGGAAAATTTTCCTGTGTTCGACCCTGGATCACCCCAGGAAACCTCTTGCTTCGCTTATACTTGGGCGAACAAGAGGAAAACTTGTGCGATAAAG
ATCACGATCGCCTAATCATCATGTTTACCATCACTTCTGATTGTGACCTGCATAAAGCTACTTCTGATACTCGTGTGCCTAAAAGGACAAACGTTGCTAAGCCAATGATG
GACTCTGTCTTTGTTAACCCTGCTAATCATGCTACTGTTGCTCCTGAAAGTCATCCTGTTGTTGATACTTCTGCTTTTGACTATGTTGCTAATTCTGTTGTCGCACCAAA
AGAAAGGCACTCTGGTTGCGTTCCCTCATCAACGGGTGCAGGTGACAACAACTCTGTGCCCTCTAGTGCTCTTGCTTTAGGGTTTCCTCCATCTACTCGTTATGTTGAGT
CTCCAAGTGATGATCATTATGATTCATTTGATGATGATCACTACTAG
Protein sequenceShow/hide protein sequence
MEDSGGRERRNIQGKKEENELLGPSRGHVRRDLKQERFFKVSRAISGACSTKPENREGIAKARGCFGQALVWGFLLKGIQKFKGFDKFELKKKSKSLRFESKSSFELGQV
LLKWFQASQGYRDSKEIKGRQVSLEGDVVGWLYVAVSSLVRRITNQETIAEYNVRVLDIANESFALGEKIVEPKLLLRRFDIKVTTIEETNDIVTLKLDELFGYLRTFKL
TFDDKGDKKGKSLAFHSVSDEEPHQGKDKCSDESLVQRCCGKFNKHPSNYKGQYNRDLGNYSSASFASYPTENRRENVGDLCVDQWQEDQELKVAHAQYDTMSKSMQMLN
SNMNDLNIILQVEKTSINKKGVGFSEAKDKSISKKNVKTVFVQAQEKSPIKTSMITARSNLPCKGAIETKRSERWEDDRTILLESSISIQDTQDRSQVAPNVNSSSNNIG
VIGVMKDPDSASQEVSEADSFNDSIGDRVSAESHNDGLTTSNVEVPSVITRILRDNCVLSVLHAEIRRRECSRRSALQLGVQGTIWRKANTLLCDADAQRDKNGLGELIR
LASVGRQLLKRVSSKDMAKHAWNEVWKQTSFWRFNSVIYILRGKFSCVRPWITPGNLLLRLYLGEQEENLCDKDHDRLIIMFTITSDCDLHKATSDTRVPKRTNVAKPMM
DSVFVNPANHATVAPESHPVVDTSAFDYVANSVVAPKERHSGCVPSSTGAGDNNSVPSSALALGFPPSTRYVESPSDDHYDSFDDDHY