CuGenDBv2

Gene ID	PI0022807
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Genome location	chr02:20383960..20385399
RNA-Seq Expression	PI0022807
Synteny	PI0022807
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0050039.1 putative E3 ubiquitin-protein ligase RHY1A [Cucumis melo var. makuwa]

9.4e-59

92.68

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAGMLPGVECARRRRCHQNKIWSDSP + AQ LTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDG AREAKRRLDERL RTQRK EDNGREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQCW
        RRKFSWRKLNWIG+EEDK GQCW
Subjt:  RRKFSWRKLNWIGIEEDKCGQCW

XP_004146704.1 uncharacterized protein LOC101215379 [Cucumis sativus]

2.6e-56

90.98

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP IAAQ LTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDG AREAKRRLDERLLRTQRK EDNGREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQC
        RRKFSWRKLNWIG+EEDKCGQC
Subjt:  RRKFSWRKLNWIGIEEDKCGQC

XP_008443904.1 PREDICTED: uncharacterized protein LOC103487385 isoform X1 [Cucumis melo]

6.5e-60

93.5

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAGMLPGVECARRRRCHQNKIWSDSP + AQ LTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDG AREAKRRLDERL RTQRK EDNGREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQCW
        RRKFSWRKLNWIG+EEDKCGQCW
Subjt:  RRKFSWRKLNWIGIEEDKCGQCW

XP_008443905.1 PREDICTED: uncharacterized protein LOC103487385 isoform X2 [Cucumis melo]

6.1e-58

92.68

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAGMLPGVECARRRRCHQNKIWSDSP + AQ LTRRSVLCLYTSNHEALLVSNPSM RRLLMEAGGEDELDG AREAKRRLDERL RTQRK EDNGREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQCW
        RRKFSWRKLNWIG+EEDKCGQCW
Subjt:  RRKFSWRKLNWIGIEEDKCGQCW

XP_038876903.1 uncharacterized protein LOC120069257 [Benincasa hispida]

1.7e-52

86.18

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAGMLPGVECARRRRCHQNK+WSDSP IAAQALTRRSVLCLYTSNHE+LL SNPS+QR LL+EAG ++ELDGTAREAKRRLD+R LRTQRK ED GREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQCW
        RRKFSW KLNW G+EEDKCGQCW
Subjt:  RRKFSWRKLNWIGIEEDKCGQCW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWJ8 Uncharacterized protein

1.2e-56

90.98

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP IAAQ LTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDG AREAKRRLDERLLRTQRK EDNGREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQC
        RRKFSWRKLNWIG+EEDKCGQC
Subjt:  RRKFSWRKLNWIGIEEDKCGQC

A0A1S3B9W3 uncharacterized protein LOC103487385 isoform X1

3.1e-60

93.5

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAGMLPGVECARRRRCHQNKIWSDSP + AQ LTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDG AREAKRRLDERL RTQRK EDNGREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQCW
        RRKFSWRKLNWIG+EEDKCGQCW
Subjt:  RRKFSWRKLNWIGIEEDKCGQCW

A0A1S3B9Y1 uncharacterized protein LOC103487385 isoform X2

2.9e-58

92.68

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAGMLPGVECARRRRCHQNKIWSDSP + AQ LTRRSVLCLYTSNHEALLVSNPSM RRLLMEAGGEDELDG AREAKRRLDERL RTQRK EDNGREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQCW
        RRKFSWRKLNWIG+EEDKCGQCW
Subjt:  RRKFSWRKLNWIGIEEDKCGQCW

A0A5A7U973 Putative E3 ubiquitin-protein ligase RHY1A

4.5e-59

92.68

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAGMLPGVECARRRRCHQNKIWSDSP + AQ LTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDG AREAKRRLDERL RTQRK EDNGREMM
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQCW
        RRKFSWRKLNWIG+EEDK GQCW
Subjt:  RRKFSWRKLNWIGIEEDKCGQCW

A0A6J1E765 uncharacterized protein LOC111430042 isoform X2

1.9e-44

75.61

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Query:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM
        MAGMLPGVECARRRRCHQNK+WSDSP IAAQALTRRSVLCLYTSNHE LL SNPS++R LL+EA  +D+LDG+AREAKRRLDER LRTQRK         
Subjt:  MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMM

Query:  RRKFSWRKLNWIGIEEDKCGQCW
         RK +W KLNW G+E+DKCGQCW
Subjt:  RRKFSWRKLNWIGIEEDKCGQCW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G15580.1 RING/U-box superfamily protein

1.8e-12

40.87

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Query:  MAGMLPGVECARRRRCH------QNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGED---ELDGTAREAKRRLDERLL---RT
        MAGMLPGVECARRRR H      ++   +   A A    TRR    LYT+NHE+        +R +  ++ GED   +LDG A+EAK+RL++RL    RT
Subjt:  MAGMLPGVECARRRRCH------QNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGED---ELDGTAREAKRRLDERLL---RT

Query:  QRKPEDNGREMMRRK
        ++  +D G ++ + K
Subjt:  QRKPEDNGREMMRRK

AT2G15580.2 RING/U-box superfamily protein

9.2e-12

39.32

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Query:  MAGMLPGVECARRRRCH------QNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGED---ELDGTAREAKRRLDERLLRTQRK
        MAGMLPGVECARRRR H      ++   +   A A    TRR    LYT+NHE+        +R +  ++ GED   +LDG A+EAK+RL++RL    R 
Subjt:  MAGMLPGVECARRRRCH------QNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGED---ELDGTAREAKRRLDERLLRTQRK

Query:  PEDNGREMMRRKFSWRK
           +G+ +  +  +W K
Subjt:  PEDNGREMMRRKFSWRK

Sequences

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CDS sequence

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ATGGCCGGAATGCTTCCTGGTGTAGAATGTGCTCGAAGAAGACGCTGTCATCAAAACAAAATATGGTCAGATTCACCGGCAATCGCCGCTCAGGCTTTAACTAGGAGATC
CGTTCTCTGCTTGTACACAAGTAACCACGAAGCGCTCCTCGTTTCAAATCCATCTATGCAGAGACGTTTGTTAATGGAGGCAGGAGGAGAGGATGAACTGGATGGAACTG
CGAGAGAAGCGAAGAGGAGATTGGATGAGCGATTGTTGAGAACGCAGAGGAAACCAGAGGATAATGGAAGAGAGATGATGAGGAGAAAATTCAGTTGGAGAAAGTTGAAT
TGGATTGGCATCGAAGAAGATAAGTGCGGCCAATGCTGGTGA

mRNA sequence

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AGAGAGTTCAATTTTCTTCTTTCCGGTGGGGCTAACTAAACTTACTCTAATCTGGTAAATTTCATGGAACCTTCCCATCTCTTTCCTCGCATTTTCTTCCTTCTCCTTCC
AATCATTGAACCACCAAATTCTTCACAAATCAACCATTATTCTTTTATTAAAAAGAAAGAACCTATAGAATCAAATCAAATCAAATCAAACGCCACAAAAAAAGCCCTAG
ATCTGTGCCGGAATTTCAAATTTTAAGGTTCCGTAAGTTTCTCCAATGGCCGGAATGCTTCCTGGTGTAGAATGTGCTCGAAGAAGACGCTGTCATCAAAACAAAATATG
GTCAGATTCACCGGCAATCGCCGCTCAGGCTTTAACTAGGAGATCCGTTCTCTGCTTGTACACAAGTAACCACGAAGCGCTCCTCGTTTCAAATCCATCTATGCAGAGAC
GTTTGTTAATGGAGGCAGGAGGAGAGGATGAACTGGATGGAACTGCGAGAGAAGCGAAGAGGAGATTGGATGAGCGATTGTTGAGAACGCAGAGGAAACCAGAGGATAAT
GGAAGAGAGATGATGAGGAGAAAATTCAGTTGGAGAAAGTTGAATTGGATTGGCATCGAAGAAGATAAGTGCGGCCAATGCTGGTGAAGAAGACGACTTGAACTTGATTT
TCAGTGAGTTTGTTCTTCTTCTTCAACACGATTGGGGGTGGGATTGTAATTTTAGTTAGCTGTTTGTAATTTCTCCATTTAAACCCCAAACAAATGTATGATTTAAATCC
TAAAAAAACAAATGTATGATTTCGAAGAATCGAAAAAAATACTCTCCAACATAACAAAATATTGTATTTTACCAATTTATTGCAACATACGTATATGTGATAATTGTGGA
ACAAATAATTGAATCTCTAATTTTGAAATTCCCATAAATGCTAGTTGAGTTATGGTTATTTGGATTTTAAGACAAGACAAAAAAGAAAAACTTGACATTTGTATCAAGTT
ATAGCAGGAAAGATAATGAGATCAGTGTAGCATTAAAAAAGCTTGATGTGAAAGTCGTTTGTTTCTGTCCTTCCGCATAATAAAAAGTAAAAAAATCAAATGCATCCATA
TGATCTTCGAAATGGATGACAGATGAGAGTATCTGAGATGAGGCTGCCAATATCCTTATGTATTAGTATGGCCATATGTGCAAATGAAGCAACAATGTGGAGAAAGGACT
ATGGTGGAGGACATGGTAGGTAAATTTTGAAAGGAAAAAA

Protein sequence

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MAGMLPGVECARRRRCHQNKIWSDSPAIAAQALTRRSVLCLYTSNHEALLVSNPSMQRRLLMEAGGEDELDGTAREAKRRLDERLLRTQRKPEDNGREMMRRKFSWRKLN
WIGIEEDKCGQCW

PI0022807 (gene) of Melon (PI 482460) v1 genome