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PI0022811 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022811
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr06:16099579..16100806
RNA-Seq ExpressionPI0022811
SyntenyPI0022811
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]7.7e-2744.38Show/hide
Query:  IVEELEEELEAMGP--IDQGPPPRKQKEVAGPSKKEENSGPKERPSGGEAKTKTPSI----NSLIKVFGWKKFFKGHTKVRIGVVEKFYAAKLNAKEFSV
        + EEL+ E+EAM    + +GP  R++       +K  ++  +ER    EA++  P +     ++ + FGW+KFFKG +K+R+ VV KFYA+  N  E+  
Subjt:  IVEELEEELEAMGP--IDQGPPPRKQKEVAGPSKKEENSGPKERPSGGEAKTKTPSI----NSLIKVFGWKKFFKGHTKVRIGVVEKFYAAKLNAKEFSV

Query:  EISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLF
         +  K+A F+ EAIN LY+ P D ETP    + +  K+ A +ALE IAW  A ++ITPTGKY LYPHQLTIEASVWLF
Subjt:  EISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLF

KAA0062748.1 hypothetical protein E6C27_scaffold382G00810 [Cucumis melo var. makuwa]1.4e-2057.3Show/hide
Query:  SFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLFFMKKKIFPTRHDSTINL
        SF+ +AIN LY++P+D +  P Q + + P + + ++ L+VI W  A WE  PTG+ QLYPHQLTIEA+VWLFF+KKKIFPTRHDST  L
Subjt:  SFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLFFMKKKIFPTRHDSTINL

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]6.3e-2145.16Show/hide
Query:  KVRIGVVEKFYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAAWEITPTG-KYQLYPHQLTIEASVWL
        K+R+ VV KFY  K N  +  + I  +   F+ E IN LY+ PND E   Q+ +   TK +A++AL+V+AWP    E+ P   +YQLYPH LT +A+VW+
Subjt:  KVRIGVVEKFYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAAWEITPTG-KYQLYPHQLTIEASVWL

Query:  FFMKKKIFPTRHDSTINLESAMLL
        FF K KIFPT +DSTI+++  ++L
Subjt:  FFMKKKIFPTRHDSTINLESAMLL

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]7.7e-1944.19Show/hide
Query:  KGHTKVRIGVVEKFYAAKLN-AKEFSVEISGKTASFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIE
        +G  +  +G  E     K+   +E    +  +   F  E IN LYD+PND+   P Q  +V   +  A+K +++I WP A    TPT + QL+PHQLTIE
Subjt:  KGHTKVRIGVVEKFYAAKLN-AKEFSVEISGKTASFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIE

Query:  ASVWLFFMKKKIFPTRHDSTINLESAMLL
        A+VWLFF+KKKIFPT HDSTI  E A++L
Subjt:  ASVWLFFMKKKIFPTRHDSTINLESAMLL

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]4.5e-1947.83Show/hide
Query:  FYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLFFMKKKIFP
        FYAAK ++ E  V +  K  SF  E IN LY + ND+++ P Q  +  PTK  +R  +++IAW  A W  T T   QLYPHQLT EA+VWL F+KKKI P
Subjt:  FYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLFFMKKKIFP

Query:  TRHDSTINLESAMLL
          +DST+ +E  +LL
Subjt:  TRHDSTINLESAMLL

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein3.7e-2744.38Show/hide
Query:  IVEELEEELEAMGP--IDQGPPPRKQKEVAGPSKKEENSGPKERPSGGEAKTKTPSI----NSLIKVFGWKKFFKGHTKVRIGVVEKFYAAKLNAKEFSV
        + EEL+ E+EAM    + +GP  R++       +K  ++  +ER    EA++  P +     ++ + FGW+KFFKG +K+R+ VV KFYA+  N  E+  
Subjt:  IVEELEEELEAMGP--IDQGPPPRKQKEVAGPSKKEENSGPKERPSGGEAKTKTPSI----NSLIKVFGWKKFFKGHTKVRIGVVEKFYAAKLNAKEFSV

Query:  EISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLF
         +  K+A F+ EAIN LY+ P D ETP    + +  K+ A +ALE IAW  A ++ITPTGKY LYPHQLTIEASVWLF
Subjt:  EISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLF

A0A5A7V6M5 Gag/pol protein3.0e-2145.16Show/hide
Query:  KVRIGVVEKFYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAAWEITPTG-KYQLYPHQLTIEASVWL
        K+R+ VV KFY  K N  +  + I  +   F+ E IN LY+ PND E   Q+ +   TK +A++AL+V+AWP    E+ P   +YQLYPH LT +A+VW+
Subjt:  KVRIGVVEKFYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAAWEITPTG-KYQLYPHQLTIEASVWL

Query:  FFMKKKIFPTRHDSTINLESAMLL
        FF K KIFPT +DSTI+++  ++L
Subjt:  FFMKKKIFPTRHDSTINLESAMLL

A0A5D3CBF2 Uncharacterized protein6.8e-2157.3Show/hide
Query:  SFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLFFMKKKIFPTRHDSTINL
        SF+ +AIN LY++P+D +  P Q + + P + + ++ L+VI W  A WE  PTG+ QLYPHQLTIEA+VWLFF+KKKIFPTRHDST  L
Subjt:  SFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLFFMKKKIFPTRHDSTINL

A0A5D3CVL7 Uncharacterized protein3.7e-1944.19Show/hide
Query:  KGHTKVRIGVVEKFYAAKLN-AKEFSVEISGKTASFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIE
        +G  +  +G  E     K+   +E    +  +   F  E IN LYD+PND+   P Q  +V   +  A+K +++I WP A    TPT + QL+PHQLTIE
Subjt:  KGHTKVRIGVVEKFYAAKLN-AKEFSVEISGKTASFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIE

Query:  ASVWLFFMKKKIFPTRHDSTINLESAMLL
        A+VWLFF+KKKIFPT HDSTI  E A++L
Subjt:  ASVWLFFMKKKIFPTRHDSTINLESAMLL

A0A5D3DES7 Uncharacterized protein2.2e-1947.83Show/hide
Query:  FYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLFFMKKKIFP
        FYAAK ++ E  V +  K  SF  E IN LY + ND+++ P Q  +  PTK  +R  +++IAW  A W  T T   QLYPHQLT EA+VWL F+KKKI P
Subjt:  FYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVET-PWQDYMVSPTKKMARKALEVIAWPRAAWEITPTGKYQLYPHQLTIEASVWLFFMKKKIFP

Query:  TRHDSTINLESAMLL
          +DST+ +E  +LL
Subjt:  TRHDSTINLESAMLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGATCATCTAGCACTCATCAGGATCGCGTAAAGGTTTGCTCTAATGGTCCTGATTCAGATGGCGAGCAAGGAACGCCACAATATACTCACCTGAGACACGACAA
GGGAAAGGTATTGCTTAAACCTCCACCAGAAGCGGCTGAATTTTTTGAAGAAGTGGAGGTTGACAACTTGGATAAGGACGTCGTGCTCGATTTCCTCAACGAACGGGTGA
GAAAGAGAAAGGAGGCACATTTGAAGAGGACGAAAAAAGTTCGTCGCAGGAAGGAAGAACGTGAGCGTTTGAGATTTGAGGAACTACGAAAGGCGGGGAAGTCCTTAGAA
ATTCATTCTTCGCCTAACATAGTTGAAGAGCTTCACAAGAAGATATCAGATAAGCTCGCTCAAGTTTCTTTCGCCAAAACGCAGAAAACCATTGAGGCGTTTAAAACCGC
GTTAAAAAGGAAGGAAGAAAAGAAGAAGATGCTTGCGGACCTGAGCGAGCAAGTGGTGGAGCTCCCCATGAAGTTTAAAGCTTTGGAGCCTGAAAGAGACCTCGAGGTCA
TCGTGGAAGAACTCGAGGAAGAGCTAGAGGCGATGGGCCCAATTGATCAAGGGCCACCGCCTAGAAAACAAAAGGAGGTCGCCGGACCATCCAAAAAAGAAGAAAACTCT
GGACCTAAAGAGCGCCCATCCGGCGGCGAGGCCAAAACAAAAACACCCTCAATCAACTCATTAATCAAGGTGTTTGGTTGGAAGAAATTTTTCAAGGGGCACACCAAGGT
ACGCATAGGTGTGGTGGAGAAGTTTTACGCCGCTAAACTCAATGCTAAAGAGTTTAGCGTTGAAATAAGTGGAAAAACGGCGAGCTTCGACGCGGAGGCCATCAACAATC
TATACGACGTGCCCAACGATGTTGAAACGCCTTGGCAGGACTATATGGTAAGCCCAACGAAGAAGATGGCTCGAAAAGCGTTAGAAGTCATCGCCTGGCCTAGGGCCGCA
TGGGAGATCACGCCGACAGGGAAATATCAACTTTATCCACACCAACTAACCATAGAAGCAAGTGTGTGGCTGTTTTTCATGAAGAAGAAGATATTCCCCACGCGCCATGA
TAGCACCATCAATTTAGAGTCAGCGATGCTACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGATCATCTAGCACTCATCAGGATCGCGTAAAGGTTTGCTCTAATGGTCCTGATTCAGATGGCGAGCAAGGAACGCCACAATATACTCACCTGAGACACGACAA
GGGAAAGGTATTGCTTAAACCTCCACCAGAAGCGGCTGAATTTTTTGAAGAAGTGGAGGTTGACAACTTGGATAAGGACGTCGTGCTCGATTTCCTCAACGAACGGGTGA
GAAAGAGAAAGGAGGCACATTTGAAGAGGACGAAAAAAGTTCGTCGCAGGAAGGAAGAACGTGAGCGTTTGAGATTTGAGGAACTACGAAAGGCGGGGAAGTCCTTAGAA
ATTCATTCTTCGCCTAACATAGTTGAAGAGCTTCACAAGAAGATATCAGATAAGCTCGCTCAAGTTTCTTTCGCCAAAACGCAGAAAACCATTGAGGCGTTTAAAACCGC
GTTAAAAAGGAAGGAAGAAAAGAAGAAGATGCTTGCGGACCTGAGCGAGCAAGTGGTGGAGCTCCCCATGAAGTTTAAAGCTTTGGAGCCTGAAAGAGACCTCGAGGTCA
TCGTGGAAGAACTCGAGGAAGAGCTAGAGGCGATGGGCCCAATTGATCAAGGGCCACCGCCTAGAAAACAAAAGGAGGTCGCCGGACCATCCAAAAAAGAAGAAAACTCT
GGACCTAAAGAGCGCCCATCCGGCGGCGAGGCCAAAACAAAAACACCCTCAATCAACTCATTAATCAAGGTGTTTGGTTGGAAGAAATTTTTCAAGGGGCACACCAAGGT
ACGCATAGGTGTGGTGGAGAAGTTTTACGCCGCTAAACTCAATGCTAAAGAGTTTAGCGTTGAAATAAGTGGAAAAACGGCGAGCTTCGACGCGGAGGCCATCAACAATC
TATACGACGTGCCCAACGATGTTGAAACGCCTTGGCAGGACTATATGGTAAGCCCAACGAAGAAGATGGCTCGAAAAGCGTTAGAAGTCATCGCCTGGCCTAGGGCCGCA
TGGGAGATCACGCCGACAGGGAAATATCAACTTTATCCACACCAACTAACCATAGAAGCAAGTGTGTGGCTGTTTTTCATGAAGAAGAAGATATTCCCCACGCGCCATGA
TAGCACCATCAATTTAGAGTCAGCGATGCTACTTTAA
Protein sequenceShow/hide protein sequence
MAGSSSTHQDRVKVCSNGPDSDGEQGTPQYTHLRHDKGKVLLKPPPEAAEFFEEVEVDNLDKDVVLDFLNERVRKRKEAHLKRTKKVRRRKEERERLRFEELRKAGKSLE
IHSSPNIVEELHKKISDKLAQVSFAKTQKTIEAFKTALKRKEEKKKMLADLSEQVVELPMKFKALEPERDLEVIVEELEEELEAMGPIDQGPPPRKQKEVAGPSKKEENS
GPKERPSGGEAKTKTPSINSLIKVFGWKKFFKGHTKVRIGVVEKFYAAKLNAKEFSVEISGKTASFDAEAINNLYDVPNDVETPWQDYMVSPTKKMARKALEVIAWPRAA
WEITPTGKYQLYPHQLTIEASVWLFFMKKKIFPTRHDSTINLESAMLL