; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022813 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022813
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed RNA polymerase III subunit RPC8
Genome locationchr01:25516636..25520311
RNA-Seq ExpressionPI0022813
SyntenyPI0022813
Gene Ontology termsGO:0006384 - transcription initiation from RNA polymerase III promoter (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0045454 - cell redox homeostasis (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR005576 - RNA polymerase Rpb7-like , N-terminal
IPR012340 - Nucleic acid-binding, OB-fold
IPR013238 - RNA polymerase III, subunit Rpc25
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135978.1 DNA-directed RNA polymerase III subunit RPC8 [Cucumis sativus]6.4e-9696.11Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPSLLNLPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK
        LGFFEDIYVPVELMPSGS+FTPDENNGG+CRWVWIYNEVPFDIYESDEIKFK+HSIEYPAILVEQPKESNSKF MEE+PK
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK

XP_008461408.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Cucumis melo]1.2e-9496.11Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPSLLNLPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK
        LGFFEDIYVPVELMPSGS+FTPDENNGG+ RWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKF MEE+PK
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK

XP_022152296.1 DNA-directed RNA polymerase III subunit RPC8 isoform X2 [Momordica charantia]4.5e-8183.15Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPS+L+LPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQ
        LGFFEDIYVP+ L+P+ S+F PD  NGGK RWVW Y+  P+DIYE+DEIKF+IH+IEYPAI VEQPKESN KFL EEQ
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQ

XP_023547503.1 DNA-directed RNA polymerase III subunit RPC8 [Cucurbita pepo subsp. pepo]1.0e-8082.87Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPS+L+LPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFLMEEQPK
        LGFFEDIYVP+ L+PS S+F PD  NGGK RWVW Y+  P+DIYE+DEIKF+IHSI+YPAI V +QP ESNSKF MEEQPK
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFLMEEQPK

XP_038897233.1 DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Benincasa hispida]1.1e-8487.22Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PP+LL+LPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPF GEVIIGKV+ESN  GLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK
        LGFFEDI VPVEL+PSGSKF PD NNGGK RWVW Y +VP DIYE+DEI+FKIHSI+YPAI VEQPKE +SKFLMEEQP+
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK

TrEMBL top hitse value%identityAlignment
A0A0A0K846 Uncharacterized protein3.1e-9696.11Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPSLLNLPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK
        LGFFEDIYVPVELMPSGS+FTPDENNGG+CRWVWIYNEVPFDIYESDEIKFK+HSIEYPAILVEQPKESNSKF MEE+PK
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK

A0A1S3CEN6 DNA-directed RNA polymerase III subunit RPC8 isoform X15.9e-9596.11Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPSLLNLPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK
        LGFFEDIYVPVELMPSGS+FTPDENNGG+ RWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKF MEE+PK
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK

A0A5A7UWI5 DNA-directed RNA polymerase III subunit RPC8 isoform X15.9e-9596.11Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPSLLNLPILDAIKGELEKLF+DKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK
        LGFFEDIYVPVELMPSGS+FTPDENNGG+ RWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKF MEE+PK
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPK

A0A6J1DFX3 DNA-directed RNA polymerase III subunit RPC8 isoform X22.2e-8183.15Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPS+L+LPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQ
        LGFFEDIYVP+ L+P+ S+F PD  NGGK RWVW Y+  P+DIYE+DEIKF+IH+IEYPAI VEQPKESN KFL EEQ
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQ

A0A6J1GPX5 DNA-directed RNA polymerase III subunit RPC82.4e-8082.32Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLSRIEHTLR+PPS+L+LPILDAIKGELEKLFLDKVVA LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRP+ GE+IIGKV+ES+ NGLRIS
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFLMEEQPK
        LGFFEDIYVP+ L+PS S+F PD  NGGK RWVW Y+  P+DIYE+DEIKF+IHSI+YPAI V +QP ESNSKF MEEQPK
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILV-EQPKESNSKFLMEEQPK

SwissProt top hitse value%identityAlignment
O94285 DNA-directed RNA polymerase III subunit rpc88.6e-2736.31Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MF LSR    + I PS    P  +A+  E+ K + +KV+ N+GL I VYD   +  G I   DG++   VVF LI+FRPF GEV++GK++  +E G+R++
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIY--------NEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNS
        + FF+DI++P +++     F PDE       WVW           E+ FDI   +EI+F+I S ++  I  ++ K + +
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIY--------NEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNS

P35718 DNA-directed RNA polymerase III subunit RPC81.5e-2633.72Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MF LS+I   +RIPP   +   + AI  +L   F +K++ N+GLCI++YD+ +V+ G + P DG++   V F  +VF+PF GE++ G + +    G+++S
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  -LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNE---VPFDIYESDEIKFKIHSIEYPAILVEQPKE
         LG F+DI++P  ++  G  +TP+E+      W+W  +E   + FD+  +++I+F+I    +  +  + PKE
Subjt:  -LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNE---VPFDIYESDEIKFKIHSIEYPAILVEQPKE

Q2T9X1 DNA-directed RNA polymerase III subunit RPC81.9e-2635.14Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MF L  +  T+RIPP      + D+I  EL K   +KV+ N+GLCI ++DI  ++  ++FP DGA+  KV F  +VF PF  E++IGK++  +  G+ +S
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIY--NEVPFDIYE--SDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPKR
        LGFF+DI +P E +   +KF   E       WVW Y   E   D+Y    +E++F++    +       P  + +    EE PK+
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIY--NEVPFDIYE--SDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPKR

Q9D2C6 DNA-directed RNA polymerase III subunit RPC85.1e-2736.22Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MF L  +  T+RIPP      + D+I  EL K   +KVV N+GLCI ++DI  ++  ++FP DGA+  KV F  +VF PF  E++IGK++  +  G+ +S
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIY--NEVPFDIY--ESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPKR
        LGFF+DI +P E +   +KF   E       WVW Y   E   D+Y    +EI+F++    +       P  + +    EE PK+
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIY--NEVPFDIY--ESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPKR

Q9Y535 DNA-directed RNA polymerase III subunit RPC83.9e-2736.22Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MF L  +  T+RIPP      + D+I  EL K   +KVV N+GLCI ++DI  ++  ++FP DGA+  KV F  +VF PF  E++IGK++  +  G+ +S
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIY--NEVPFDIY--ESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPKR
        LGFF+DI +P E +   +KF   E       WVW Y   E   D+Y    +EI+F++    +       P  +++    EE PK+
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIY--NEVPFDIY--ESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPKR

Arabidopsis top hitse value%identityAlignment
AT1G06790.1 RNA polymerase Rpb7 N-terminal domain-containing protein1.9e-5355.56Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLS +EH+LR+PP LLNLP+ DAIK  L+ +FLDKV+A+LGLC+S+YDI+SV+GGF+ P DGAATYKV   ++VFRPF GEVI  K +ES+ NGLR++
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESD--EIKFKIHSIEYPAILVEQPKES
        LGFF+DIYVP  LMP  ++  PD  N  +  WVW Y E   D    D  +IKF++ SI YP++  E+ +++
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESD--EIKFKIHSIEYPAILVEQPKES

AT1G06790.2 RNA polymerase Rpb7 N-terminal domain-containing protein1.9e-5355.56Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MFYLS +EH+LR+PP LLNLP+ DAIK  L+ +FLDKV+A+LGLC+S+YDI+SV+GGF+ P DGAATYKV   ++VFRPF GEVI  K +ES+ NGLR++
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESD--EIKFKIHSIEYPAILVEQPKES
        LGFF+DIYVP  LMP  ++  PD  N  +  WVW Y E   D    D  +IKF++ SI YP++  E+ +++
Subjt:  LGFFEDIYVPVELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESD--EIKFKIHSIEYPAILVEQPKES

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain5.1e-0627.91Show/hide
Query:  MFYLSRIEHTLRIPPSLLN---LPILDAIKGELEKLFLD-KVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENG
        MF   ++   + IP   ++   L +  AI  EL + F   K    LG  ++V  +  +  G I    G   + V+F+ + F+ F GE+I G V +  ++G
Subjt:  MFYLSRIEHTLRIPPSLLN---LPILDAIKGELEKLFLD-KVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENG

Query:  LRISLGFFEDIYVPVELMPSGSKFTPDEN
        + +  G  E++Y+    MP   K+ P EN
Subjt:  LRISLGFFEDIYVPVELMPSGSKFTPDEN

AT5G59180.1 DNA-directed RNA polymerase II1.5e-0524.17Show/hide
Query:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS
        MF+   +E  +++ P      + + +  +L K          G  +++  I ++  G I    G  T+ V +  +VFRPF GE++   V   N+ G    
Subjt:  MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRIS

Query:  LGFFEDIYVPVELMPSGSKF
         G  + I+V   L+P   +F
Subjt:  LGFFEDIYVPVELMPSGSKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTATCTTAGCCGAATTGAGCACACACTACGTATACCTCCAAGCTTGCTTAATCTACCTATCCTTGATGCTATTAAGGGTGAGCTGGAGAAACTATTCCTAGATAA
GGTGGTTGCAAACTTGGGGCTATGTATTTCTGTTTATGATATAAGATCGGTTGATGGGGGCTTTATCTTTCCCAGCGATGGTGCTGCAACATACAAGGTTGTGTTCACGT
TGATTGTGTTTCGTCCATTCACAGGGGAGGTAATTATTGGAAAAGTTCAAGAATCAAATGAAAATGGTTTGCGAATATCACTTGGATTTTTTGAGGATATTTATGTTCCG
GTCGAGCTTATGCCCTCTGGATCTAAATTCACGCCAGATGAAAATAATGGTGGAAAATGCAGATGGGTATGGATCTATAATGAAGTACCATTCGACATATATGAATCTGA
TGAGATAAAATTTAAAATACACAGCATAGAGTACCCTGCAATCCTAGTGGAGCAGCCAAAAGAGAGTAATTCAAAATTTCTAATGGAGGAGCAACCAAAGAGAGTATTAA
TGTAA
mRNA sequenceShow/hide mRNA sequence
CGTGCTTCACCTCCCTCTCTCACTTTTCAGCCTTACAGCCGGCTCCGCCGTGTTTTTCCGTTCAGTATCGCCGCACTGCCTCCCTTGTACCCAGTGTGAACTGGATTTTT
TACTTTACTGTTACCGGTGTCTCTCAAATGTATCTTTATATCTATTTCACTCTTCCTCTCTCTCTCTCTTGACCTCTCTCTCTGCCATTATTATACGCTCCTTCTCCGTC
TGATTCTTTCTTTCAAAACTCATTTAATTCTTCCTCAAAATTTTAGTCTTTAGAAGATCCCCCTTTCTCTGTTTGACTTAATTGTAAGTTTCACCGCTGTTTTCATACTT
GGGTGTGAACTCTCTGTTTTTGCTGAATTGATCTGCTGCTTTGTTTATACATTACTTTGTTCTCATTTGATTTAATTATGTGACTTTTTTTAAAAAGTAATTTCTTTTTT
TCTTTTCTCTGTTTTTTGGTACATTTGGCTCTTTGAGTTTTCGTAATTGTAATTATTTGAGTTTAGTTCTTGTGGGGTAATTTATTTTCTGTTTTATACATTATGTAGTA
CGGAATTTCCCTTATCATTTATACCTTCGGTTGAAATCTGATGTTTTGCATTGGTTTCCTTTATCCAGAGCCTGAAGAATTGTGTTTTGGTTGGAACTATTAGCTTTAGA
GAACATCCAGATGTTCTATCTTAGCCGAATTGAGCACACACTACGTATACCTCCAAGCTTGCTTAATCTACCTATCCTTGATGCTATTAAGGGTGAGCTGGAGAAACTAT
TCCTAGATAAGGTGGTTGCAAACTTGGGGCTATGTATTTCTGTTTATGATATAAGATCGGTTGATGGGGGCTTTATCTTTCCCAGCGATGGTGCTGCAACATACAAGGTT
GTGTTCACGTTGATTGTGTTTCGTCCATTCACAGGGGAGGTAATTATTGGAAAAGTTCAAGAATCAAATGAAAATGGTTTGCGAATATCACTTGGATTTTTTGAGGATAT
TTATGTTCCGGTCGAGCTTATGCCCTCTGGATCTAAATTCACGCCAGATGAAAATAATGGTGGAAAATGCAGATGGGTATGGATCTATAATGAAGTACCATTCGACATAT
ATGAATCTGATGAGATAAAATTTAAAATACACAGCATAGAGTACCCTGCAATCCTAGTGGAGCAGCCAAAAGAGAGTAATTCAAAATTTCTAATGGAGGAGCAACCAAAG
AGAGTATTAATGTAAAACCATTCGCTCCCATGGTTATTACTGCATCACTTGACCAAGATGGATTGGGTCCTGTTTCATGGTGGGATGGGTCGGGAGAGGCCGAGGACGAG
GACGAGGTCGAAGAAGATTCCTAAGATCAGTATCTCGTTCTGTTTTTGTGACAAATTGGTATTCGCTCATTTATAACTTTGTATTATAAGTCATTTATTATTTGGTACAG
GCATGATAAAGCAGAGCTTGTCACGTATGATCAAGCAATTTTTTTTTTTTAATTTATAAAAAAGAAGGGTTCCATTGTCACTTTTTA
Protein sequenceShow/hide protein sequence
MFYLSRIEHTLRIPPSLLNLPILDAIKGELEKLFLDKVVANLGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISLGFFEDIYVP
VELMPSGSKFTPDENNGGKCRWVWIYNEVPFDIYESDEIKFKIHSIEYPAILVEQPKESNSKFLMEEQPKRVLM