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PI0022843 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022843
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr09:6026018..6027037
RNA-Seq ExpressionPI0022843
SyntenyPI0022843
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]6.6e-5745.45Show/hide
Query:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW
        MVYF E FLS  +HL + +D+NQPRED L+  VEK  TG FAD WP +DN+ IL +L VEIPLS  K AWVLQSSIH+E PN D+ LTL   +IEGQTRW
Subjt:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWL--------------------------------------------------------------------------------
        GA+TKV GEFCFTDCYWEWL                                                                                
Subjt:  GAVTKVPGEFCFTDCYWEWL--------------------------------------------------------------------------------

Query:  -------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHFFALG
               KSYDKPTTRKQKKVSRSKST+NPD  KI++R+W++REN+ F  LGI++DLKDETYLV F         F + G F  LG
Subjt:  -------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHFFALG

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.9e-5642.77Show/hide
Query:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW
        MVYF E FLS  +HL I +D+NQPRED L L+VEKS  G FAD WP +DN+S+LP+L +E+PLS+ K+AWVLQSSIH+E PN  + LTL   +IEGQTRW
Subjt:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWE----------------------------------------------------------------------------------
        G VTKVPGEFCFTD YWE                                                                                  
Subjt:  GAVTKVPGEFCFTDCYWE----------------------------------------------------------------------------------

Query:  --------------------WL-------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQK
                            W+       KSYDKPTTRKQKK SRSKST+NPD SKI++REWS+RE+M F  LGIRDDLKDETYL  F         F +
Subjt:  --------------------WL-------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQK

Query:  WGHFFALGFSR
         G F  LG  R
Subjt:  WGHFFALGFSR

TYK05702.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-5655.35Show/hide
Query:  ILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRWGAVTKVPGEFCFTDCY
        +L    +PRED L LLVEK   G FAD WP +DN+S+LP+L VEIPLS+ K+AWVLQSSIH+E PN  + LTL  R+IEGQTRWG VTKVP EFCFTDCY
Subjt:  ILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRWGAVTKVPGEFCFTDCY

Query:  WEW----------------------------LKSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLC
        WEW                            L+SYDKPTTRKQKK SRSKST+N D  +I++REWS RE+M F  LGIRDDLKDE YLV F         
Subjt:  WEW----------------------------LKSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLC

Query:  FQKWGHFFALGFSRS
        F + G F   G  R+
Subjt:  FQKWGHFFALGFSRS

TYK06433.1 hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]7.0e-5948.85Show/hide
Query:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW
        MVYF E FLS  +HL IL+D+NQPRED L L+VEK   G FAD WP +DN+S+L +L VE+PLS+ K+AWVLQSSIH+E PN  + LTL  R+IEGQTRW
Subjt:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWL-------------------------------------------------------------------KSYDKPTTRKQKK
        G +TKVPGEF FTDCYWEWL                                                                    SYDKPTTRKQKK
Subjt:  GAVTKVPGEFCFTDCYWEWL-------------------------------------------------------------------KSYDKPTTRKQKK

Query:  VSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHF
         SRSKST+NP  SKI++REWS+RE+M F  LGI+DDLKDETYL  F         F + G F
Subjt:  VSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHF

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]1.5e-5642.9Show/hide
Query:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW
        MVYF E FLS  +HL IL+D+NQPRED L L+VEK   G FA+ WP +DN+S+LP+L VE+ LS+ K+AWVLQSSIH E PN  + LTL  R+IEGQTRW
Subjt:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWL--------------------------------------------------------------------------------
        G VTKVPGEFCF DCYWEWL                                                                                
Subjt:  GAVTKVPGEFCFTDCYWEWL--------------------------------------------------------------------------------

Query:  ----------------------------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKW
                                    KSYDKPTTRKQKK SRSKST+NPD SKI++REWS+RE+M F  LGIRDDLKDETYL  F         F + 
Subjt:  ----------------------------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKW

Query:  GHFFALGFSR
        G F   G  R
Subjt:  GHFFALGFSR

TrEMBL top hitse value%identityAlignment
A0A5A7UGW6 PMD domain-containing protein9.3e-5742.77Show/hide
Query:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW
        MVYF E FLS  +HL I +D+NQPRED L L+VEKS  G FAD WP +DN+S+LP+L +E+PLS+ K+AWVLQSSIH+E PN  + LTL   +IEGQTRW
Subjt:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWE----------------------------------------------------------------------------------
        G VTKVPGEFCFTD YWE                                                                                  
Subjt:  GAVTKVPGEFCFTDCYWE----------------------------------------------------------------------------------

Query:  --------------------WL-------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQK
                            W+       KSYDKPTTRKQKK SRSKST+NPD SKI++REWS+RE+M F  LGIRDDLKDETYL  F         F +
Subjt:  --------------------WL-------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQK

Query:  WGHFFALGFSR
         G F  LG  R
Subjt:  WGHFFALGFSR

A0A5D3C3B2 Putative mitochondrial protein9.3e-5755.35Show/hide
Query:  ILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRWGAVTKVPGEFCFTDCY
        +L    +PRED L LLVEK   G FAD WP +DN+S+LP+L VEIPLS+ K+AWVLQSSIH+E PN  + LTL  R+IEGQTRWG VTKVP EFCFTDCY
Subjt:  ILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRWGAVTKVPGEFCFTDCY

Query:  WEW----------------------------LKSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLC
        WEW                            L+SYDKPTTRKQKK SRSKST+N D  +I++REWS RE+M F  LGIRDDLKDE YLV F         
Subjt:  WEW----------------------------LKSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLC

Query:  FQKWGHFFALGFSRS
        F + G F   G  R+
Subjt:  FQKWGHFFALGFSRS

A0A5D3C3D7 PMD domain-containing protein3.4e-5948.85Show/hide
Query:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW
        MVYF E FLS  +HL IL+D+NQPRED L L+VEK   G FAD WP +DN+S+L +L VE+PLS+ K+AWVLQSSIH+E PN  + LTL  R+IEGQTRW
Subjt:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWL-------------------------------------------------------------------KSYDKPTTRKQKK
        G +TKVPGEF FTDCYWEWL                                                                    SYDKPTTRKQKK
Subjt:  GAVTKVPGEFCFTDCYWEWL-------------------------------------------------------------------KSYDKPTTRKQKK

Query:  VSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHF
         SRSKST+NP  SKI++REWS+RE+M F  LGI+DDLKDETYL  F         F + G F
Subjt:  VSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHF

A0A5D3D2A0 PMD domain-containing protein3.2e-5745.45Show/hide
Query:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW
        MVYF E FLS  +HL + +D+NQPRED L+  VEK  TG FAD WP +DN+ IL +L VEIPLS  K AWVLQSSIH+E PN D+ LTL   +IEGQTRW
Subjt:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWL--------------------------------------------------------------------------------
        GA+TKV GEFCFTDCYWEWL                                                                                
Subjt:  GAVTKVPGEFCFTDCYWEWL--------------------------------------------------------------------------------

Query:  -------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHFFALG
               KSYDKPTTRKQKKVSRSKST+NPD  KI++R+W++REN+ F  LGI++DLKDETYLV F         F + G F  LG
Subjt:  -------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHFFALG

A0A5D3DCE5 PMD domain-containing protein7.1e-5742.9Show/hide
Query:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW
        MVYF E FLS  +HL IL+D+NQPRED L L+VEK   G FA+ WP +DN+S+LP+L VE+ LS+ K+AWVLQSSIH E PN  + LTL  R+IEGQTRW
Subjt:  MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRW

Query:  GAVTKVPGEFCFTDCYWEWL--------------------------------------------------------------------------------
        G VTKVPGEFCF DCYWEWL                                                                                
Subjt:  GAVTKVPGEFCFTDCYWEWL--------------------------------------------------------------------------------

Query:  ----------------------------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKW
                                    KSYDKPTTRKQKK SRSKST+NPD SKI++REWS+RE+M F  LGIRDDLKDETYL  F         F + 
Subjt:  ----------------------------KSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKW

Query:  GHFFALGFSR
        G F   G  R
Subjt:  GHFFALGFSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCATCGAACACTTCTTATCTAGAAATAAGCACCTTACAATCCTTACTGATAAGAATCAACCAAGAGAAGATGATCTTCATCTCCTTGTAGAGAAGTCGTT
GACAGGTCCTTTTGCAGATTTTTGGCCGAACATAGACAACAGCTCGATTCTTCCCAAATTATTTGTGGAGATACCTTTGTCTCAGAGAAAAAACGCCTGGGTCCTGCAAT
CTTCTATCCATGATGAGGTTCCTAATGTCGATCAAGTCCTCACTCTCGAACATCGCATAATTGAAGGCCAAACCCGTTGGGGTGCTGTGACTAAAGTCCCAGGAGAATTC
TGCTTTACTGACTGTTATTGGGAGTGGCTAAAAAGCTATGATAAGCCAACTACAAGGAAGCAAAAAAAGGTGTCACGTTCCAAATCTACCGAAAATCCAGACGATTCGAA
GATTGAGTCTCGAGAATGGTCTACCAGAGAAAACATGTTCTTTAAAGGACTTGGGATAAGGGATGACTTGAAGGATGAAACATATTTAGTGCCTTTCTGTCTTGTTGGTT
GTGCCTCTTTGTGTTTCCAAAAATGGGGTCATTTCTTCGCCCTGGGGTTTTCAAGATCGCAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCATCGAACACTTCTTATCTAGAAATAAGCACCTTACAATCCTTACTGATAAGAATCAACCAAGAGAAGATGATCTTCATCTCCTTGTAGAGAAGTCGTT
GACAGGTCCTTTTGCAGATTTTTGGCCGAACATAGACAACAGCTCGATTCTTCCCAAATTATTTGTGGAGATACCTTTGTCTCAGAGAAAAAACGCCTGGGTCCTGCAAT
CTTCTATCCATGATGAGGTTCCTAATGTCGATCAAGTCCTCACTCTCGAACATCGCATAATTGAAGGCCAAACCCGTTGGGGTGCTGTGACTAAAGTCCCAGGAGAATTC
TGCTTTACTGACTGTTATTGGGAGTGGCTAAAAAGCTATGATAAGCCAACTACAAGGAAGCAAAAAAAGGTGTCACGTTCCAAATCTACCGAAAATCCAGACGATTCGAA
GATTGAGTCTCGAGAATGGTCTACCAGAGAAAACATGTTCTTTAAAGGACTTGGGATAAGGGATGACTTGAAGGATGAAACATATTTAGTGCCTTTCTGTCTTGTTGGTT
GTGCCTCTTTGTGTTTCCAAAAATGGGGTCATTTCTTCGCCCTGGGGTTTTCAAGATCGCAAGCTTAA
Protein sequenceShow/hide protein sequence
MVYFIEHFLSRNKHLTILTDKNQPREDDLHLLVEKSLTGPFADFWPNIDNSSILPKLFVEIPLSQRKNAWVLQSSIHDEVPNVDQVLTLEHRIIEGQTRWGAVTKVPGEF
CFTDCYWEWLKSYDKPTTRKQKKVSRSKSTENPDDSKIESREWSTRENMFFKGLGIRDDLKDETYLVPFCLVGCASLCFQKWGHFFALGFSRSQA