; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022869 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022869
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPOU domain, class 3, transcription factor 3-A
Genome locationchr05:10824529..10824857
RNA-Seq ExpressionPI0022869
SyntenyPI0022869
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017165.1 hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-1650.88Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLSP------------------------------KQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQL
        M+GLIPMFYRAMKK R R QY+VLSP                              +     +A+RRYNS+GGSTP++WRR+  AA   SSHGP    QL
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLSP------------------------------KQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQL

Query:  VRFRSQRILSCLTG
        VRFRSQRILSCLTG
Subjt:  VRFRSQRILSCLTG

XP_004138944.1 uncharacterized protein LOC101210346 [Cucumis sativus]7.0e-2967.27Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLS-------------------------PKQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIP+FYRAMKKNRRRRQYTVLS                         P      +AYRRYNSY GST Q+WRRSGVAAGKSSSHGPPPEQQLVRFRS
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLS-------------------------PKQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

XP_008441665.1 PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo]5.4e-2967.27Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLSPKQNQNQ-------------------------KAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIPMFYRAMKKNRRRRQYTVLS K                              + YRRYNSYGGSTPQ+WRRSGVAAGKS SHG PPEQQLVRFRS
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLSPKQNQNQ-------------------------KAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

XP_022969943.1 uncharacterized protein LOC111468990 [Cucurbita maxima]2.0e-1550Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLSP--------------------------------KQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQ
        M+GLIPMFYRAMKK R R QY+VLSP                                +     +A RRYNS+GGSTP++WRR+  AA   SSHGP    
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLSP--------------------------------KQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQ

Query:  QLVRFRSQRILSCLTG
        QLVRFRSQRILSCLTG
Subjt:  QLVRFRSQRILSCLTG

XP_038875434.1 uncharacterized protein LOC120067892 [Benincasa hispida]4.9e-2259.82Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLSPK----------------------------QNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVR
        M+GLIPMFYRAMKKNR RRQY+VLSPK                               + +AYRRYNSYGGSTPQDWRR+G A GK S HG PP+QQLVR
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLSPK----------------------------QNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVR

Query:  FRSQRILSCLTG
        FRSQRIL CLTG
Subjt:  FRSQRILSCLTG

TrEMBL top hitse value%identityAlignment
A0A0A0LL24 Uncharacterized protein3.4e-2967.27Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLS-------------------------PKQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIP+FYRAMKKNRRRRQYTVLS                         P      +AYRRYNSY GST Q+WRRSGVAAGKSSSHGPPPEQQLVRFRS
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLS-------------------------PKQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

A0A1S3B4K9 uncharacterized protein LOC1034857492.6e-2967.27Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLSPKQNQNQ-------------------------KAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIPMFYRAMKKNRRRRQYTVLS K                              + YRRYNSYGGSTPQ+WRRSGVAAGKS SHG PPEQQLVRFRS
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLSPKQNQNQ-------------------------KAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

A0A5A7ST27 Uncharacterized protein2.6e-2967.27Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLSPKQNQNQ-------------------------KAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS
        MDGLIPMFYRAMKKNRRRRQYTVLS K                              + YRRYNSYGGSTPQ+WRRSGVAAGKS SHG PPEQQLVRFRS
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLSPKQNQNQ-------------------------KAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRS

Query:  QRILSCLTGH
        QRILSCLTGH
Subjt:  QRILSCLTGH

A0A6J1ELR2 uncharacterized protein LOC1114357691.2e-1550.43Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLSP------------------------------KQNQNQKAYRRYNSYGGSTPQDWRR-SGVAAGKSSSHGPPPEQQ
        M+GLIPMFYRAMKK R R QY+VLSP                              +     +A+RRYNS+GGSTP++WRR +  AA   SSHGP    Q
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLSP------------------------------KQNQNQKAYRRYNSYGGSTPQDWRR-SGVAAGKSSSHGPPPEQQ

Query:  LVRFRSQRILSCLTG
        LVRFRSQRILSCLTG
Subjt:  LVRFRSQRILSCLTG

A0A6J1I2E5 uncharacterized protein LOC1114689909.6e-1650Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLSP--------------------------------KQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQ
        M+GLIPMFYRAMKK R R QY+VLSP                                +     +A RRYNS+GGSTP++WRR+  AA   SSHGP    
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLSP--------------------------------KQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQ

Query:  QLVRFRSQRILSCLTG
        QLVRFRSQRILSCLTG
Subjt:  QLVRFRSQRILSCLTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44010.1 unknown protein4.7e-0740.2Show/hide
Query:  MDGLIPMFYRAMKKNRRRRQYTVLS--------------PKQNQNQKAYRRYNSYGG----STPQDWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCL
        MDGLIPM  +A+KKN  RR+Y  LS               + N + + +RR  S G     S+ +  R  GVA  KS +  PP E QLVRF+S R+ SC+
Subjt:  MDGLIPMFYRAMKKNRRRRQYTVLS--------------PKQNQNQKAYRRYNSYGG----STPQDWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCL

Query:  TG
        +G
Subjt:  TG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCTCCAAAACAGAATCAGAATCAGAAGGCTTACCGGAG
ATACAACTCATACGGCGGATCTACCCCTCAGGACTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTTAGGTTCA
GAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTTTGATTCCGATGTTTTATAGAGCGATGAAGAAAAATAGAAGGAGAAGGCAATATACAGTGCTTTCTCCAAAACAGAATCAGAATCAGAAGGCTTACCGGAG
ATACAACTCATACGGCGGATCTACCCCTCAGGACTGGCGGAGGAGTGGCGTAGCCGCCGGGAAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTTAGGTTCA
GAAGCCAGAGGATTCTGTCCTGCTTGACTGGCCATTAA
Protein sequenceShow/hide protein sequence
MDGLIPMFYRAMKKNRRRRQYTVLSPKQNQNQKAYRRYNSYGGSTPQDWRRSGVAAGKSSSHGPPPEQQLVRFRSQRILSCLTGH