; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022892 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022892
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr03:5888919..5889676
RNA-Seq ExpressionPI0022892
SyntenyPI0022892
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064726.1 classical arabinogalactan protein 9-like [Cucumis melo var. makuwa]2.3e-8593.58Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA-PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP
        MEHFSKTLHFSSI ILLIL LAGAAPEDGRVV+VVPPVSLLCISECSTCPTICA PPPPP VLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP
Subjt:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA-PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP

Query:  PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFFWGLFLFHLMLCSW
        PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPS TAAP GNTNSNAYNYYFYAPASS+  PSLP AFFWGLFLFHL+LCSW
Subjt:  PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFFWGLFLFHLMLCSW

KAG6585753.1 hypothetical protein SDJN03_18486, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4871.04Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAGAA-PEDG-RVVEVVPPVSLLCISECSTCPTICAPPPPP-IVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSP
        MEH + T  F   FILLI+ LAGAA P D  R+VEVVPPVSLLCISECSTCP ICAPPPPP + LKSPPPVPH PP+A FPLN PP     SPP P+PSP
Subjt:  MEHFSKTLHFSSIFILLILRLAGAA-PEDG-RVVEVVPPVSLLCISECSTCPTICAPPPPP-IVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSP

Query:  PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLM
        PPPP    A SSHSPPPPAF+YYF+LPPPPPVLIP P+PP TTAAPHGNT  NAYNYYFYA  S + + P AF W LFLFHL+
Subjt:  PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLM

XP_008445508.1 PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo]5.1e-7793.68Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA-PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP
        MEHFSKTLHFSSI ILLIL LAGAAPEDGRVV+VVPPVSLLCISECSTCPTICA PPPPP VLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP
Subjt:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA-PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP

Query:  PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFF
        PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPS TAAP GNTNSNAYNYYFYAPASS+  PSLP AFF
Subjt:  PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFF

XP_011657382.1 extensin [Cucumis sativus]6.7e-8592.59Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA---PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSP
        MEHFSKTLHFSSI ILLILRLA A PEDGRVVEVVPPVSLLCISECSTCPTICA   PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPP PSP
Subjt:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA---PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSP

Query:  PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFFWGLFLFHLMLCSW
        PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPS TA PHGNTNSNAYNYYFYAPASS+  PSLP A FWGLFLFHLMLCSW
Subjt:  PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFFWGLFLFHLMLCSW

XP_022132157.1 leucine-rich repeat extensin-like protein 3 [Momordica charantia]6.7e-5369.68Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAG--AAPEDGRVVEVVPPVSLLCISECSTCPTICAPPPPP-IVLKSPPPVPHVPPLAYFPLNSPP-PRPTSSPPPPSPS
        MEHF +  HFS + ILLI+ LAG  AA ED R+VEVVPPVSLLCISECSTCP IC+PPPPP   LKSPP  PH PPLAY PLN+PP P P    P PSP 
Subjt:  MEHFSKTLHFSSIFILLILRLAG--AAPEDGRVVEVVPPVSLLCISECSTCPTICAPPPPP-IVLKSPPPVPHVPPLAYFPLNSPP-PRPTSSPPPPSPS

Query:  PPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLMLCSW
        PPPPP+   A  SH PPPPAF YYFNLPPPPPVLIPVPVPP  TAAPHGNTNSNAYNYYFYA  SS+ SLPA +   LF+F  M   W
Subjt:  PPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLMLCSW

TrEMBL top hitse value%identityAlignment
A0A0A0KD44 Uncharacterized protein3.2e-8592.59Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA---PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSP
        MEHFSKTLHFSSI ILLILRLA A PEDGRVVEVVPPVSLLCISECSTCPTICA   PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPP PSP
Subjt:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA---PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSP

Query:  PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFFWGLFLFHLMLCSW
        PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPS TA PHGNTNSNAYNYYFYAPASS+  PSLP A FWGLFLFHLMLCSW
Subjt:  PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFFWGLFLFHLMLCSW

A0A1S3BCX5 classical arabinogalactan protein 9-like2.5e-7793.68Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA-PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP
        MEHFSKTLHFSSI ILLIL LAGAAPEDGRVV+VVPPVSLLCISECSTCPTICA PPPPP VLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP
Subjt:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA-PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP

Query:  PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFF
        PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPS TAAP GNTNSNAYNYYFYAPASS+  PSLP AFF
Subjt:  PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFF

A0A5A7VEH7 Classical arabinogalactan protein 9-like1.1e-8593.58Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA-PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP
        MEHFSKTLHFSSI ILLIL LAGAAPEDGRVV+VVPPVSLLCISECSTCPTICA PPPPP VLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP
Subjt:  MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICA-PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPP

Query:  PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFFWGLFLFHLMLCSW
        PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPS TAAP GNTNSNAYNYYFYAPASS+  PSLP AFFWGLFLFHL+LCSW
Subjt:  PPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSA--PSLPAAFFWGLFLFHLMLCSW

A0A6J1BT26 leucine-rich repeat extensin-like protein 33.3e-5369.68Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAG--AAPEDGRVVEVVPPVSLLCISECSTCPTICAPPPPP-IVLKSPPPVPHVPPLAYFPLNSPP-PRPTSSPPPPSPS
        MEHF +  HFS + ILLI+ LAG  AA ED R+VEVVPPVSLLCISECSTCP IC+PPPPP   LKSPP  PH PPLAY PLN+PP P P    P PSP 
Subjt:  MEHFSKTLHFSSIFILLILRLAG--AAPEDGRVVEVVPPVSLLCISECSTCPTICAPPPPP-IVLKSPPPVPHVPPLAYFPLNSPP-PRPTSSPPPPSPS

Query:  PPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLMLCSW
        PPPPP+   A  SH PPPPAF YYFNLPPPPPVLIPVPVPP  TAAPHGNTNSNAYNYYFYA  SS+ SLPA +   LF+F  M   W
Subjt:  PPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLMLCSW

A0A6J1GGS2 extensin-3-like1.9e-4869.95Show/hide
Query:  MEHFSKTLHFSSIFILLILRLAGA--APEDGRVVEVVPPVSLLCISECSTCPTICAPPPPP-IVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSP
        MEH + T  F   FILLI+ LAGA  A ++ R+VEVVPPVSLLCISECSTCP ICAPPPPP + LKSPPPVPH PP+A FPLN PP     SPP PSPSP
Subjt:  MEHFSKTLHFSSIFILLILRLAGA--APEDGRVVEVVPPVSLLCISECSTCPTICAPPPPP-IVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSP

Query:  PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLM
        PPPP    A SSHSPPPPAF+YYF+LPPPPPVLIP P+PP TTAAPHGNT  NAYNYYFYA  S + + P  F W LFLFHL+
Subjt:  PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLM

SwissProt top hitse value%identityAlignment
O65375 Leucine-rich repeat extensin-like protein 11.6e-0439.23Show/hide
Query:  APPPPPIVLKSPPPVPHV---PPLAYFPLNSPPPRPTSSPPPPSPSP--------PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAA
        +PPPPP V  SPPP P+V   PP  Y   + PPP   SSPPPP PSP        PPPP    A  + SPPPP+  YY  +   PP   PV  PP T + 
Subjt:  APPPPPIVLKSPPPVPHV---PPLAYFPLNSPPPRPTSSPPPPSPSP--------PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAA

Query:  PHGNTNSNAYNYYFYAPASSAPSLPAAFFW
        P  +         +Y P + +P  P+  ++
Subjt:  PHGNTNSNAYNYYFYAPASSAPSLPAAFFW

Q9T0K5 Leucine-rich repeat extensin-like protein 34.6e-0448.04Show/hide
Query:  STCPTICAPPP--PPIVLKSPPPVPHVPPLAYF---PLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTA
        ST PT+ +PPP  PP  + SPPP P  PP  Y    P   PPP P  SPPPP P PPPPP        +SPPPP+       PPPPPV  P P PP    
Subjt:  STCPTICAPPP--PPIVLKSPPPVPHVPPLAYF---PLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTA

Query:  AP
         P
Subjt:  AP

Arabidopsis top hitse value%identityAlignment
AT1G12040.1 leucine-rich repeat/extensin 11.1e-0539.23Show/hide
Query:  APPPPPIVLKSPPPVPHV---PPLAYFPLNSPPPRPTSSPPPPSPSP--------PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAA
        +PPPPP V  SPPP P+V   PP  Y   + PPP   SSPPPP PSP        PPPP    A  + SPPPP+  YY  +   PP   PV  PP T + 
Subjt:  APPPPPIVLKSPPPVPHV---PPLAYFPLNSPPPRPTSSPPPPSPSP--------PPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAA

Query:  PHGNTNSNAYNYYFYAPASSAPSLPAAFFW
        P  +         +Y P + +P  P+  ++
Subjt:  PHGNTNSNAYNYYFYAPASSAPSLPAAFFW

AT1G26240.1 Proline-rich extensin-like family protein1.6e-0450Show/hide
Query:  APPPPPIVLKSPPPVPHV----PPLAYFPLNSPPPRPTSSPPPPSP----SPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPP
        +PPPPP V KSPPP P+V    PP  Y   + PPP    S PPPSP    SPPPPP     V S  PPPP   Y +  PPPPP +   P PP
Subjt:  APPPPPIVLKSPPPVPHV----PPLAYFPLNSPPPRPTSSPPPPSP----SPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPP

AT2G15880.1 Leucine-rich repeat (LRR) family protein2.1e-0444.66Show/hide
Query:  PTICAPPPPPIVLKSPPPVPHVPPLAYF---PLNSP------PPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTT
        P + +PPPPP V   PPPV   PP  +    P++SP      PP P  SPPPP  SPPPPP  +     HSPPPP         PPPPV  P P PP  +
Subjt:  PTICAPPPPPIVLKSPPPVPHVPPLAYF---PLNSP------PPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTT

Query:  AAP
          P
Subjt:  AAP

AT4G13340.1 Leucine-rich repeat (LRR) family protein3.3e-0548.04Show/hide
Query:  STCPTICAPPP--PPIVLKSPPPVPHVPPLAYF---PLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTA
        ST PT+ +PPP  PP  + SPPP P  PP  Y    P   PPP P  SPPPP P PPPPP        +SPPPP+       PPPPPV  P P PP    
Subjt:  STCPTICAPPP--PPIVLKSPPPVPHVPPLAYF---PLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPPPAFRYYFNLPPPPPVLIPVPVPPSTTA

Query:  AP
         P
Subjt:  AP

AT5G11990.1 proline-rich family protein1.2e-0739.01Show/hide
Query:  IFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICAPPP-PPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHS
        I  L+++ +  ++P D     V+ P   LCISECSTCPTIC+PPP  P    SPPP P +P  +  P   PPP    SPPP S S  PPP     ++   
Subjt:  IFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICAPPP-PPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHS

Query:  PPPPAFRYYFNLPPPPPVLIP-----VPVPPSTTAAPHGNTNSN-----AYNYYFYAPASSAPSLPAAFFWGLFLFHLMLCS
        PPPP F YYF   PPPP L P      P  PS+  +P G +         + Y+++  AS+A  L    F   FL  L++ S
Subjt:  PPPPAFRYYFNLPPPPPVLIP-----VPVPPSTTAAPHGNTNSN-----AYNYYFYAPASSAPSLPAAFFWGLFLFHLMLCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATTTTTCCAAAACCCTCCATTTCTCTTCCATTTTCATTCTTCTTATCCTCCGCCTCGCCGGAGCAGCCCCCGAAGACGGCCGTGTCGTCGAGGTCGTTCCTCC
GGTTAGCCTTCTTTGTATCAGCGAATGTTCAACTTGCCCCACCATCTGCGCGCCACCACCGCCACCGATTGTGCTCAAGTCACCTCCGCCGGTGCCTCATGTGCCACCAT
TGGCTTACTTTCCACTCAATTCACCCCCACCTCGACCAACCTCATCTCCACCGCCGCCGTCGCCTTCACCTCCGCCACCTCCGGCTACAGCGACGGCGGTTTCTTCTCAT
TCCCCACCGCCACCCGCATTCAGATATTATTTCAACTTGCCACCACCGCCGCCGGTGCTGATTCCGGTACCTGTGCCGCCGTCGACGACGGCGGCGCCTCATGGAAATAC
GAATAGTAATGCTTATAATTACTACTTTTATGCTCCGGCATCGTCTGCTCCGTCTCTTCCGGCGGCGTTTTTTTGGGGTTTGTTTCTCTTCCATTTGATGTTGTGTTCAT
GGTGA
mRNA sequenceShow/hide mRNA sequence
GCAAATTCATAACCAACCCCTCCCTTCTAACTCTCCTTCTCCACTTCAATTCCCTCTTCTTCTTATTCATTACAAAGCTTCCTCTTTTCTACAACCCATTCATCCATGGA
GCATTTTTCCAAAACCCTCCATTTCTCTTCCATTTTCATTCTTCTTATCCTCCGCCTCGCCGGAGCAGCCCCCGAAGACGGCCGTGTCGTCGAGGTCGTTCCTCCGGTTA
GCCTTCTTTGTATCAGCGAATGTTCAACTTGCCCCACCATCTGCGCGCCACCACCGCCACCGATTGTGCTCAAGTCACCTCCGCCGGTGCCTCATGTGCCACCATTGGCT
TACTTTCCACTCAATTCACCCCCACCTCGACCAACCTCATCTCCACCGCCGCCGTCGCCTTCACCTCCGCCACCTCCGGCTACAGCGACGGCGGTTTCTTCTCATTCCCC
ACCGCCACCCGCATTCAGATATTATTTCAACTTGCCACCACCGCCGCCGGTGCTGATTCCGGTACCTGTGCCGCCGTCGACGACGGCGGCGCCTCATGGAAATACGAATA
GTAATGCTTATAATTACTACTTTTATGCTCCGGCATCGTCTGCTCCGTCTCTTCCGGCGGCGTTTTTTTGGGGTTTGTTTCTCTTCCATTTGATGTTGTGTTCATGGTGA
AAGCTTTGTATATTAACTTTCATGGAGTTTTGGGTGGAAAAAAACTCTGATTGGGACTCTCTTAATTAGCTTAATTATAAGGTTTATTGTTTTGGTAA
Protein sequenceShow/hide protein sequence
MEHFSKTLHFSSIFILLILRLAGAAPEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSH
SPPPPAFRYYFNLPPPPPVLIPVPVPPSTTAAPHGNTNSNAYNYYFYAPASSAPSLPAAFFWGLFLFHLMLCSW