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PI0022894 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022894
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description40S ribosomal protein S24
Genome locationchr05:2489865..2491480
RNA-Seq ExpressionPI0022894
SyntenyPI0022894
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001976 - Ribosomal protein S24e
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR018098 - Ribosomal S24e conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7833558.1 40S ribosomal protein S24-1-like [Senna tora]5.7e-6597.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL+R+YDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_008455742.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]2.0e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKL+RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_022143165.1 40S ribosomal protein S24-1 [Momordica charantia]1.2e-6599.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_022937688.1 40S ribosomal protein S24-1-like [Cucurbita moschata]3.4e-6598.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

XP_022946610.1 40S ribosomal protein S24-1 [Cucurbita moschata]5.7e-6597.81Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL+RIYDVKDPN+IFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

TrEMBL top hitse value%identityAlignment
A0A1S3C1J8 40S ribosomal protein S249.5e-6699.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKL+RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A5D3D4C1 40S ribosomal protein S249.5e-6699.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKL+RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A6J1CN14 40S ribosomal protein S245.6e-6699.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

A0A6J1HN66 40S ribosomal protein S241.6e-6598.54Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRPNVSKAELKEKL RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

E5GBS0 40S ribosomal protein S249.5e-6699.27Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKL+RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

SwissProt top hitse value%identityAlignment
Q56JU9 40S ribosomal protein S244.0e-3764.39Show/hide
Query:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ +IDVLHPG+  V K E++EKL+++Y    P+ IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        RKQ KERKNR KK+RG  K        AGKKK
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

Q5RAQ8 40S ribosomal protein S244.0e-3764.39Show/hide
Query:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS
        VTIRTRKFMTNRLL RKQ +IDVLHPG+  V K E++EKL+++Y    P+ IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + S
Subjt:  VTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKS

Query:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK
        RKQ KERKNR KK+RG  K        AGKKK
Subjt:  RKQMKERKNRAKKIRGVKKTKASDAAKAGKKK

Q8LC83 40S ribosomal protein S24-21.4e-5886.36Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQF+IDVLHPGR NVSKAELKEKL+R+Y+VKDPNAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q962Q6 40S ribosomal protein S244.3e-3962.88Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        M +   TIRTRKFMTNRLL+RKQ + DVLHPG+P VSK E++EKL+++Y V  P+ +FVF F+T+FGGGKSTGF LIYD+++ AKK+EPK+RL R+GL  
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K   +RKQ KERKNR KK+RG KK+K   AAK
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Q9SS17 40S ribosomal protein S24-12.6e-6089.39Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKL+R+Y+VKDPNAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

Arabidopsis top hitse value%identityAlignment
AT3G04920.1 Ribosomal protein S24e family protein1.8e-6189.39Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTRKFMTNRLLSRKQF+IDVLHPGR NVSKAELKEKL+R+Y+VKDPNAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA DA K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK

AT5G28060.1 Ribosomal protein S24e family protein1.0e-5986.36Show/hide
Query:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT
        MA+KAVTIRTR FMTNRLL+RKQF+IDVLHPGR NVSKAELKEKL+R+Y+VKDPNAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDT
Subjt:  MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDT

Query:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
        K+EKSRKQ+KERKNRAKKIRGVKKTKA D  K
Subjt:  KVEKSRKQMKERKNRAKKIRGVKKTKASDAAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACAAAGCAGTCACCATTCGGACCAGGAAGTTCATGACCAACAGGCTCCTCTCCAGGAAGCAATTCATCATTGATGTTCTTCACCCAGGCAGACCTAACGTCTC
AAAGGCTGAGCTGAAGGAGAAGCTGTCCAGAATCTATGATGTAAAAGACCCAAATGCTATCTTTGTTTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGT
TTGGTTTGATCTACGATTCTGTCGAGAATGCAAAGAAGTACGAGCCAAAATACAGGCTAATCAGGAATGGACTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAG
GAAAGGAAGAACAGGGCGAAGAAAATCCGAGGTGTTAAGAAGACCAAGGCTTCAGATGCTGCTAAGGCAGGAAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
CCCAAAATCAGGACTCTCCTACCGCTTTTCCCTTCGCCGTCGCCTTCTTCGAGCTTCAAGCCTTCCATCTTCAGCCATGGCGGACAAAGCAGTCACCATTCGGACCAGGA
AGTTCATGACCAACAGGCTCCTCTCCAGGAAGCAATTCATCATTGATGTTCTTCACCCAGGCAGACCTAACGTCTCAAAGGCTGAGCTGAAGGAGAAGCTGTCCAGAATC
TATGATGTAAAAGACCCAAATGCTATCTTTGTTTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGTTTGGTTTGATCTACGATTCTGTCGAGAATGCAAA
GAAGTACGAGCCAAAATACAGGCTAATCAGGAATGGACTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGGCGAAGAAAATCCGAGGTG
TTAAGAAGACCAAGGCTTCAGATGCTGCTAAGGCAGGAAAGAAGAAATAAATTTGATGGAATTTTGTGCTTATGGGCAACGATAATCTGCAGAATTGTGTTTTTCTTTTA
GTAGAGTCTCTTTTAGTTATCTTTTTACTCTTCAATTAAATTATGTTAATCAGTGATTTGGTTGTTGGTGATTAGTGATATGAAAACTTTGGTTCTTTTTCAGAGGACAG
AATTTTTGACTTTACTGGAAATATATATATTTCCTTGTTTTTATTTTTGATGTTTTGGTTGACACTTTGACCCATTGAGGCTTTATCGCTGGTAGATTATGAAAATCGAT
TGATGGGATAATTCCAAATCTTTATCTA
Protein sequenceShow/hide protein sequence
MADKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRPNVSKAELKEKLSRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMK
ERKNRAKKIRGVKKTKASDAAKAGKKK