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PI0022897 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022897
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr01:9091514..9093826
RNA-Seq ExpressionPI0022897
SyntenyPI0022897
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035273.1 transposase [Cucumis melo var. makuwa]8.6e-1948.98Show/hide
Query:  TNDQTQS-LDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVR----------------------------------------
        T+ QT S LDANIDFD NE VGEDFVYDTIV++ E D +TTPFEQGSSEIDIYLLEANVR                                        
Subjt:  TNDQTQS-LDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVR----------------------------------------

Query:  --------------------NEGFRVVMDNEKELEDLPDFDKLLITD
                             EGFRVVM+NEKELEDLPDFDKL ITD
Subjt:  --------------------NEGFRVVMDNEKELEDLPDFDKLLITD

KAA0056156.1 transposase [Cucumis melo var. makuwa]2.3e-1950.35Show/hide
Query:  TNDQTQS-LDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEG-------------------------------------
        T+ QT S LDANIDFD NE VGEDFVYDTIV+EFE D +TTPFEQGSSEI IYLLEANVR E                                      
Subjt:  TNDQTQS-LDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEG-------------------------------------

Query:  -------------------FRVVMDNEKELEDLPDFDKLLITD
                           FRVVM+NEKELEDLPDFDKL ITD
Subjt:  -------------------FRVVMDNEKELEDLPDFDKLLITD

KAA0060741.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.4e-2185.29Show/hide
Query:  KVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEGFRVVMDNEKELEDLPDFDKLLITD
        K+ +DFVYDTIVEEFE DA TTPFEQGSSEIDIYLLEANVR EGF VVM+NEKEL+DLPDFDKL ITD
Subjt:  KVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEGFRVVMDNEKELEDLPDFDKLLITD

KAA0067726.1 transposase [Cucumis melo var. makuwa]7.5e-2346.39Show/hide
Query:  MDSTDVEFD---GSETSKLVLDED-------IDVNTND----------------QT-QSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSE
        MDSTD+E +    SE SK+V DED       IDV+ +                 QT   LDANIDFD NE VGEDFVYDTIVEEFE D +TTPFEQGSSE
Subjt:  MDSTDVEFD---GSETSKLVLDED-------IDVNTND----------------QT-QSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSE

Query:  IDIYLLEANVR--------------------------------------------------------NEGFRVVMDNEKELEDLPDFDKLLITD
        IDIYLLEANVR                                                         EGFRVVM+NEKELEDLPDFDKL ITD
Subjt:  IDIYLLEANVR--------------------------------------------------------NEGFRVVMDNEKELEDLPDFDKLLITD

TYK04573.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.1e-1846.9Show/hide
Query:  IDVNTNDQTQSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVR-------------------------------------
        I   +     SLDANIDFD NE VGEDFVYDTIV+EFEGDA TTPFEQGSSEIDIYLLEANV                                      
Subjt:  IDVNTNDQTQSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVR-------------------------------------

Query:  -----------------------NEGFRVVMDNEKELEDLPDFDK
                                EGFRVVM+NEKEL+DLPDFDK
Subjt:  -----------------------NEGFRVVMDNEKELEDLPDFDK

TrEMBL top hitse value%identityAlignment
A0A5A7SXI9 Transposase4.1e-1948.98Show/hide
Query:  TNDQTQS-LDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVR----------------------------------------
        T+ QT S LDANIDFD NE VGEDFVYDTIV++ E D +TTPFEQGSSEIDIYLLEANVR                                        
Subjt:  TNDQTQS-LDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVR----------------------------------------

Query:  --------------------NEGFRVVMDNEKELEDLPDFDKLLITD
                             EGFRVVM+NEKELEDLPDFDKL ITD
Subjt:  --------------------NEGFRVVMDNEKELEDLPDFDKLLITD

A0A5A7UE50 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.4e-1946.9Show/hide
Query:  IDVNTNDQTQSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVR-------------------------------------
        I   +     SLDANIDFD NE VGEDFVYDTIV+EFEGDA TTPFEQGSSEIDIYLLEANV                                      
Subjt:  IDVNTNDQTQSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVR-------------------------------------

Query:  -----------------------NEGFRVVMDNEKELEDLPDFDK
                                EGFRVVM+NEKEL+DLPDFDK
Subjt:  -----------------------NEGFRVVMDNEKELEDLPDFDK

A0A5A7UPB8 Transposase1.1e-1950.35Show/hide
Query:  TNDQTQS-LDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEG-------------------------------------
        T+ QT S LDANIDFD NE VGEDFVYDTIV+EFE D +TTPFEQGSSEI IYLLEANVR E                                      
Subjt:  TNDQTQS-LDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEG-------------------------------------

Query:  -------------------FRVVMDNEKELEDLPDFDKLLITD
                           FRVVM+NEKELEDLPDFDKL ITD
Subjt:  -------------------FRVVMDNEKELEDLPDFDKLLITD

A0A5A7VMG3 Transposase3.6e-2346.39Show/hide
Query:  MDSTDVEFD---GSETSKLVLDED-------IDVNTND----------------QT-QSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSE
        MDSTD+E +    SE SK+V DED       IDV+ +                 QT   LDANIDFD NE VGEDFVYDTIVEEFE D +TTPFEQGSSE
Subjt:  MDSTDVEFD---GSETSKLVLDED-------IDVNTND----------------QT-QSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSE

Query:  IDIYLLEANVR--------------------------------------------------------NEGFRVVMDNEKELEDLPDFDKLLITD
        IDIYLLEANVR                                                         EGFRVVM+NEKELEDLPDFDKL ITD
Subjt:  IDIYLLEANVR--------------------------------------------------------NEGFRVVMDNEKELEDLPDFDKLLITD

A0A5D3BRS6 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.2e-2185.29Show/hide
Query:  KVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEGFRVVMDNEKELEDLPDFDKLLITD
        K+ +DFVYDTIVEEFE DA TTPFEQGSSEIDIYLLEANVR EGF VVM+NEKEL+DLPDFDKL ITD
Subjt:  KVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEGFRVVMDNEKELEDLPDFDKLLITD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAACGGATGTGGAGTTTGATGGAAGTGAAACTTCAAAACTTGTACTAGACGAAGATATAGATGTCAATACAAATGACCAAACCCAAAGCTTGGATGCGAATAT
TGATTTTGATCCAAATGAAAAGGTGGGTGAAGATTTTGTCTATGACACGATTGTTGAGGAATTTGAAGGTGATGCAACTACTACACCTTTCGAACAGGGGTCATCAGAGA
TTGATATCTATTTGTTGGAAGCCAATGTTAGGAACGAAGGATTCCGAGTGGTTATGGATAATGAAAAGGAGCTTGAAGACCTTCCAGATTTTGATAAGTTGTTAATTACC
GATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAACGGATGTGGAGTTTGATGGAAGTGAAACTTCAAAACTTGTACTAGACGAAGATATAGATGTCAATACAAATGACCAAACCCAAAGCTTGGATGCGAATAT
TGATTTTGATCCAAATGAAAAGGTGGGTGAAGATTTTGTCTATGACACGATTGTTGAGGAATTTGAAGGTGATGCAACTACTACACCTTTCGAACAGGGGTCATCAGAGA
TTGATATCTATTTGTTGGAAGCCAATGTTAGGAACGAAGGATTCCGAGTGGTTATGGATAATGAAAAGGAGCTTGAAGACCTTCCAGATTTTGATAAGTTGTTAATTACC
GATTAG
Protein sequenceShow/hide protein sequence
MDSTDVEFDGSETSKLVLDEDIDVNTNDQTQSLDANIDFDPNEKVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDIYLLEANVRNEGFRVVMDNEKELEDLPDFDKLLIT
D