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PI0022921 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022921
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA-dependent RNA polymerase
Genome locationchr08:872534..873464
RNA-Seq ExpressionPI0022921
SyntenyPI0022921
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008686 - RNA-dependent RNA polymerase, mitoviral


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051203.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.3e-1345.74Show/hide
Query:  IIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP
        I+R    +C  +  YA +  P L   L + A  +V   +   S+S  WERLW   TKPP +SPLPL WW+GRGNP +PYL G+I ++L+REL+P
Subjt:  IIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP

PHT34157.1 hypothetical protein CQW23_25957 [Capsicum baccatum]3.6e-0954.39Show/hide
Query:  SVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP
        S L  ++S  WERL   A KP  S PLPL +WIGRG P NPYL+G+I++ L++EL+P
Subjt:  SVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP

PHT46098.1 hypothetical protein CQW23_15256 [Capsicum baccatum]5.0e-1131.98Show/hide
Query:  PIKKFLDIPLTDCDSFDYQSATDRWPLS---------------------------------IKKKAYQV------NMDFRGPTTIIRIFFPLCVDNPHYA
        P+ K       +C SFD +SATDRWPLS                                 I K+ Y++       + + G  T +     LC  +  Y 
Subjt:  PIKKFLDIPLTDCDSFDYQSATDRWPLS---------------------------------IKKKAYQV------NMDFRGPTTIIRIFFPLCVDNPHYA

Query:  LIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEIL
           P G+++      A     S L  ++S  WERL   A KP  S PLPL +WIGRGNP NPYL+G+I++ L
Subjt:  LIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEIL

PHT96863.1 hypothetical protein BC332_34211 [Capsicum chinense]6.1e-0954.39Show/hide
Query:  SVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP
        S L  ++S  WERL   A KP  S PLPL +WIGRG P NPYL+G+I++ L++EL+P
Subjt:  SVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP

PHU03937.1 hypothetical protein BC332_29188 [Capsicum chinense]3.6e-0936.84Show/hide
Query:  IPLTDCDSFDYQSATDRWPLSIKKKAYQVNMDFRGPTTIIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQV-YESVLELSKSLNWERLWTVATKPPES
        IP T C  F    A   W  S++ K   V++         R+   LC     Y     P    +L WL        S L L++S  WERL     KP  S
Subjt:  IPLTDCDSFDYQSATDRWPLSIKKKAYQVNMDFRGPTTIIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQV-YESVLELSKSLNWERLWTVATKPPES

Query:  SPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP
         PLPL WWIGR    NPYL+G+I++ L+REL+P
Subjt:  SPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP

TrEMBL top hitse value%identityAlignment
A0A2G2VMG1 Uncharacterized protein1.7e-0954.39Show/hide
Query:  SVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP
        S L  ++S  WERL   A KP  S PLPL +WIGRG P NPYL+G+I++ L++EL+P
Subjt:  SVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP

A0A2G2WLJ5 Uncharacterized protein2.4e-1131.98Show/hide
Query:  PIKKFLDIPLTDCDSFDYQSATDRWPLS---------------------------------IKKKAYQV------NMDFRGPTTIIRIFFPLCVDNPHYA
        P+ K       +C SFD +SATDRWPLS                                 I K+ Y++       + + G  T +     LC  +  Y 
Subjt:  PIKKFLDIPLTDCDSFDYQSATDRWPLS---------------------------------IKKKAYQV------NMDFRGPTTIIRIFFPLCVDNPHYA

Query:  LIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEIL
           P G+++      A     S L  ++S  WERL   A KP  S PLPL +WIGRGNP NPYL+G+I++ L
Subjt:  LIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEIL

A0A2G3BBS9 Uncharacterized protein1.7e-0936.84Show/hide
Query:  IPLTDCDSFDYQSATDRWPLSIKKKAYQVNMDFRGPTTIIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQV-YESVLELSKSLNWERLWTVATKPPES
        IP T C  F    A   W  S++ K   V++         R+   LC     Y     P    +L WL        S L L++S  WERL     KP  S
Subjt:  IPLTDCDSFDYQSATDRWPLSIKKKAYQVNMDFRGPTTIIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQV-YESVLELSKSLNWERLWTVATKPPES

Query:  SPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP
         PLPL WWIGR    NPYL+G+I++ L+REL+P
Subjt:  SPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP

A0A3G0TEC3 uncharacterized protein LOC1078516923.0e-0954.39Show/hide
Query:  SVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP
        S L  ++S  WERL   A KP  S PLPL +WIGRG P NPYL+G+I++ L++EL+P
Subjt:  SVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP

A0A5D3CLF8 Putative mitochondrial protein2.6e-1345.74Show/hide
Query:  IIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP
        I+R    +C  +  YA +  P L   L + A  +V   +   S+S  WERLW   TKPP +SPLPL WW+GRGNP +PYL G+I ++L+REL+P
Subjt:  IIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSPLPLSWWIGRGNPRNPYLQGEIIEILKRELRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCCAATCAAGAAATTTCTGGATATTCCTTTGACGGATTGCGACTCCTTCGATTATCAGAGTGCAACTGATCGATGGCCACTTTCTATTAAGAAGAAAGCCTACCA
AGTTAATATGGATTTCAGAGGTCCGACAACAATAATAAGAATATTCTTTCCTTTATGTGTGGACAACCCCCACTACGCGCTTATTATGCCTCCTGGGCTTGCACTATCAT
TGGTGTGGCTAGCTGCAGAGCAGGTTTACGAGTCCGTTCTAGAACTCAGTAAATCGCTAAATTGGGAAAGGTTATGGACAGTTGCTACAAAGCCTCCGGAGTCATCTCCA
TTACCCTTATCATGGTGGATTGGTAGGGGCAACCCTAGAAACCCCTATTTGCAGGGAGAAATAATAGAGATCTTGAAGCGGGAGCTCCGACCGAATTTCGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCCAATCAAGAAATTTCTGGATATTCCTTTGACGGATTGCGACTCCTTCGATTATCAGAGTGCAACTGATCGATGGCCACTTTCTATTAAGAAGAAAGCCTACCA
AGTTAATATGGATTTCAGAGGTCCGACAACAATAATAAGAATATTCTTTCCTTTATGTGTGGACAACCCCCACTACGCGCTTATTATGCCTCCTGGGCTTGCACTATCAT
TGGTGTGGCTAGCTGCAGAGCAGGTTTACGAGTCCGTTCTAGAACTCAGTAAATCGCTAAATTGGGAAAGGTTATGGACAGTTGCTACAAAGCCTCCGGAGTCATCTCCA
TTACCCTTATCATGGTGGATTGGTAGGGGCAACCCTAGAAACCCCTATTTGCAGGGAGAAATAATAGAGATCTTGAAGCGGGAGCTCCGACCGAATTTCGGCTAG
Protein sequenceShow/hide protein sequence
MGPIKKFLDIPLTDCDSFDYQSATDRWPLSIKKKAYQVNMDFRGPTTIIRIFFPLCVDNPHYALIMPPGLALSLVWLAAEQVYESVLELSKSLNWERLWTVATKPPESSP
LPLSWWIGRGNPRNPYLQGEIIEILKRELRPNFG