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PI0022939 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022939
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr06:11235663..11237571
RNA-Seq ExpressionPI0022939
SyntenyPI0022939
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025148.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.2e-0445.68Show/hide
Query:  MISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIEK
        +ISTLK+E K V   FE+LSK V++ +S TQ LDN++  GK    KKG+GF     Q +++G S T+FI A+ +  K  EK
Subjt:  MISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIEK

KAA0042084.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.3e-0536.36Show/hide
Query:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANE----ACVKKIEKTRRRRYDNDDHVPLLM
        ++TLK E K  R +FE LSK V++L SGTQ L+NI+  GK    K G+GFS    +G     S TMF +A++        K E+   R    +D   + +
Subjt:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANE----ACVKKIEKTRRRRYDNDDHVPLLM

Query:  PNTSLSRSAE
         +  LSR+ +
Subjt:  PNTSLSRSAE

KAA0056263.1 F5J5.1 [Cucumis melo var. makuwa]1.5e-0444.3Show/hide
Query:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIE
        I+TLK E K  R  FE L+KSVR+L++GTQ LD+++  G+  +GK+G+GFS  G++   N   I MFIR +     ++E
Subjt:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIE

KAA0056406.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.9e-0438.82Show/hide
Query:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEAC--VKKIEKTRR
        I TLK E K  R  FE LSKS+++++SGT  LD+++  GK    K+G+GFS+ G     N    T+F+R +++    +KI K ++
Subjt:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEAC--VKKIEKTRR

TYK05238.1 F5J5.1 [Cucumis melo var. makuwa]1.5e-0444.3Show/hide
Query:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIE
        I+TLK E K  R  FE L+KSVR+L++GTQ LD+++  G+  +GK+G+GFS  G++   N   I MFIR +     ++E
Subjt:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIE

TrEMBL top hitse value%identityAlignment
A0A5A7SG89 Gag-proteinase polyprotein5.7e-0545.68Show/hide
Query:  MISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIEK
        +ISTLK+E K V   FE+LSK V++ +S TQ LDN++  GK    KKG+GF     Q +++G S T+FI A+ +  K  EK
Subjt:  MISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIEK

A0A5A7UK00 F5J5.17.5e-0544.3Show/hide
Query:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIE
        I+TLK E K  R  FE L+KSVR+L++GTQ LD+++  G+  +GK+G+GFS  G++   N   I MFIR +     ++E
Subjt:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIE

A0A5D3C212 F5J5.17.5e-0544.3Show/hide
Query:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIE
        I+TLK E K  R  FE L+KSVR+L++GTQ LD+++  G+  +GK+G+GFS  G++   N   I MFIR +     ++E
Subjt:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIE

A0A5D3D296 Gag-pol polyprotein2.6e-0536.36Show/hide
Query:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANE----ACVKKIEKTRRRRYDNDDHVPLLM
        ++TLK E K  R +FE LSK V++L SGTQ L+NI+  GK    K G+GFS    +G     S TMF +A++        K E+   R    +D   + +
Subjt:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANE----ACVKKIEKTRRRRYDNDDHVPLLM

Query:  PNTSLSRSAE
         +  LSR+ +
Subjt:  PNTSLSRSAE

A0A5D3DZR7 Gag-pol polyprotein2.8e-0438.82Show/hide
Query:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEAC--VKKIEKTRR
        I TLK E K  R  FE LSKS+++++SGT  LD+++  GK    K+G+GFS+ G     N    T+F+R +++    +KI K ++
Subjt:  ISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEAC--VKKIEKTRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCCACTCTCAAACTTGAGTTTAAAGTTGTTCGTGTGGATTTTGAAGCCCTATCCAAGTCTGTCAGGATCCTCAGTTCTGGCACACAAGGCTTGGACAATATTAT
GAAAGCTGGCAAGATTGGGATGGGTAAAAAGGGTATAGGATTCTCTGATAATGGTCAGCAAGGAGCAACCAATGGATGTTCAATAACTATGTTTATTCGTGCTAATGAAG
CCTGTGTTAAGAAAATTGAAAAGACAAGAAGGCGGAGATATGATAATGATGATCATGTCCCTCTCCTTATGCCTAATACTAGCCTTTCAAGATCAGCTGAGAGCCAGTCT
GATGTTACTTCAGTTAATGACTCACGTGATAGCTGGAGGGACAATGTATCTACAGATGTATCAGATACTGAGACTGTAGTGGATCCATCGACTGCAGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATATCCACTCTCAAACTTGAGTTTAAAGTTGTTCGTGTGGATTTTGAAGCCCTATCCAAGTCTGTCAGGATCCTCAGTTCTGGCACACAAGGCTTGGACAATATTAT
GAAAGCTGGCAAGATTGGGATGGGTAAAAAGGGTATAGGATTCTCTGATAATGGTCAGCAAGGAGCAACCAATGGATGTTCAATAACTATGTTTATTCGTGCTAATGAAG
CCTGTGTTAAGAAAATTGAAAAGACAAGAAGGCGGAGATATGATAATGATGATCATGTCCCTCTCCTTATGCCTAATACTAGCCTTTCAAGATCAGCTGAGAGCCAGTCT
GATGTTACTTCAGTTAATGACTCACGTGATAGCTGGAGGGACAATGTATCTACAGATGTATCAGATACTGAGACTGTAGTGGATCCATCGACTGCAGCGTGA
Protein sequenceShow/hide protein sequence
MISTLKLEFKVVRVDFEALSKSVRILSSGTQGLDNIMKAGKIGMGKKGIGFSDNGQQGATNGCSITMFIRANEACVKKIEKTRRRRYDNDDHVPLLMPNTSLSRSAESQS
DVTSVNDSRDSWRDNVSTDVSDTETVVDPSTAA