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PI0022942 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022942
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr05:15324944..15326901
RNA-Seq ExpressionPI0022942
SyntenyPI0022942
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily
IPR034122 - Retropepsin-like domain, bacterial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040414.1 uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa]1.5e-3740Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ GP TRG   Q SP+++ K+KG   +   + RL NLE  ME+VQ  + RLSEN+E L+QENA+I++V K+MI+++  +F  +   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH
        ARI HAPT+LRDA QLWWRRK+A  ++  + + +WEQFK E + H
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH

KAA0042140.1 uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa]3.3e-3739.59Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ GP TRG   Q SP+++ K+KG T +   + RL NLE  ME+VQ  + RLSEN+E L+QENA+I++V K+MI+++  +F ++   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH
        ARI HAPT+LRD  QLWWR K+A  ++  + + +WEQFK E + H
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH

KAA0050866.1 uncharacterized protein E6C27_scaffold404G001380 [Cucumis melo var. makuwa]6.3e-3639.33Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ G  TRG   Q S +++ K+KG  +K   + RL NLE  ME+VQ    RLS+N+E L+QENA+I++V K+MI+++  +F ++   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK
        ARI HA T+LRDA QLWWRRK+A  ++  + L +WEQFK
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK

KAE8653039.1 hypothetical protein Csa_019702 [Cucumis sativus]2.8e-3640.24Show/hide
Query:  MTSQEGYESL-VELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFN
        M+S+EG+ S   E V+ GP TRG   +RSP+++ K+KG  ++   E RLANLE ++E+VQ  +  L +NYE LIQEN +ISA  K+++ ++  +F +D  
Subjt:  MTSQEGYESL-VELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFN

Query:  TLSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHND
         LSS  +T                                         TST   VQG  T  + VPK +TY+  RNA +VENFLF L+ Y+ AVGV +D
Subjt:  TLSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHND

Query:  DARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH
        +A+I +APT+LRDA QLWWRR++A  +++ + ++TWEQFK E + H
Subjt:  DARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH

TYK18079.1 uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa]3.3e-3739.59Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ GP TRG   Q SP+++ K+KG T +   + RL NLE  ME+VQ  + RLSEN+E L+QENA+I++V K+MI+++  +F ++   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH
        ARI HAPT+LRD  QLWWR K+A  ++  + + +WEQFK E + H
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH

TrEMBL top hitse value%identityAlignment
A0A5A7TAA5 Uncharacterized protein7.3e-3840Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ GP TRG   Q SP+++ K+KG   +   + RL NLE  ME+VQ  + RLSEN+E L+QENA+I++V K+MI+++  +F  +   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH
        ARI HAPT+LRDA QLWWRRK+A  ++  + + +WEQFK E + H
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH

A0A5A7TFP3 Retrotrans_gag domain-containing protein1.6e-3739.59Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ GP TRG   Q SP+++ K+KG T +   + RL NLE  ME+VQ  + RLSEN+E L+QENA+I++V K+MI+++  +F ++   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH
        ARI HAPT+LRD  QLWWR K+A  ++  + + +WEQFK E + H
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH

A0A5A7U9J4 Retrotrans_gag domain-containing protein3.1e-3639.33Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ G  TRG   Q S +++ K+KG  +K   + RL NLE  ME+VQ    RLS+N+E L+QENA+I++V K+MI+++  +F ++   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK
        ARI HA T+LRDA QLWWRRK+A  ++  + L +WEQFK
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK

A0A5A7VEX8 Polyprotein5.2e-3627.68Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ GP TRG   Q SP+++ K+KG   +   + RL NLE  ME+VQ  + RLSEN+E L+QENA+I++V K+MI+++  +F  +   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK------------ERKSHG-------------------------------------------
        ARI HAPT+LRDA QLWWRRK+A  ++  + + +WEQFK            E +S G                                           
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK------------ERKSHG-------------------------------------------

Query:  ---------------------------------------KEGEVSKSKKNMSKEEDG--------NAKNEGKHNQEANSSSK------------------
                                               K G  S   KN  + + G        N KN+G H  E+++  K                  
Subjt:  ---------------------------------------KEGEVSKSKKNMSKEEDG--------NAKNEGKHNQEANSSSK------------------

Query:  -------------------------------LPKE-----RGLLYVKAALNNEDTLAVLDSGATYSIIDPQEAKRLGLKVTKKADTMMKVINGRPTLNDE
                                       + KE     +GLLY    +  ++  A+ D+GA+++ +D QEAKRLGLK  ++  T +KV+N +      
Subjt:  -------------------------------LPKE-----RGLLYVKAALNNEDTLAVLDSGATYSIIDPQEAKRLGLKVTKKADTMMKVINGRPTLNDE

Query:  LAWNVRANIGGWQ
        +A  V   IG WQ
Subjt:  LAWNVRANIGGWQ

A0A5D3D3V4 Retrotrans_gag domain-containing protein1.6e-3739.59Show/hide
Query:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT
        M+++EG+ S VE V+ GP TRG   Q SP+++ K+KG T +   + RL NLE  ME+VQ  + RLSEN+E L+QENA+I++V K+MI+++  +F ++   
Subjt:  MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNT

Query:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD
        L+S  +T                                      +  TST     G  T ++ VPK + Y+  RNA +V+NFLF LE YF A+GV +D+
Subjt:  LSSEAST--------------------------------------SGMTSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDD

Query:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH
        ARI HAPT+LRD  QLWWR K+A  ++  + + +WEQFK E + H
Subjt:  ARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFK-ERKSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCCCAAGAAGGATACGAGTCACTCGTTGAGCTAGTCGTTGCAGGGCCAACGACACGAGGACATACTGCACAACGTTCTCCTTCCAAGAAACCCAAGGCGAAGGG
CACGACTTCTAAACATATGACGGAAGCACGCCTAGCCAACTTGGAAGATAATATGGAAAATGTGCAAGCCATGATCAGTAGGCTAAGTGAAAACTACGAGGGGTTAATCC
AAGAAAATGCCAAGATCAGCGCTGTTGTAAAAGACATGATCAAGGAGATCAAGTTGTCATTCGATAGAGATTTCAACACTCTATCAAGCGAAGCGTCGACTAGTGGCATG
ACGAGCACACAAGAACTTGTGCAAGGGCAAGTTACACCCGACTTGATAGTGCCAAAGCTCAACACTTATGACGACACAAGGAATGCGATGATTGTGGAAAATTTTCTATT
CGACTTGGAGAGTTATTTCGAAGCCGTTGGAGTGCATAATGATGATGCACGCATTGGCCATGCTCCAACATACCTACGAGATGCAGTTCAATTATGGTGGCGTCGTAAAC
ATGCCGAACATGAGCGAGACCGGAGCCTTCTTCGAACGTGGGAACAATTCAAAGAAAGAAAGTCCCATGGAAAGGAAGGAGAAGTGTCGAAGTCAAAGAAAAATATGAGC
AAAGAGGAAGACGGGAACGCTAAAAATGAAGGGAAGCACAATCAAGAAGCAAACTCTTCCTCAAAATTGCCCAAAGAAAGAGGTTTACTATATGTAAAAGCTGCACTCAA
CAATGAAGACACCTTAGCGGTGCTAGACAGCGGCGCAACCTATAGCATCATTGACCCACAAGAGGCCAAACGGCTAGGCCTCAAGGTCACGAAGAAGGCCGACACCATGA
TGAAGGTGATTAACGGACGACCAACACTCAATGACGAATTGGCTTGGAATGTGAGGGCGAATATCGGAGGATGGCAAAGTTTTTATGGCGAAAAGAGAAGCAACTATGCG
AAGAAAATGTCAGACAAGGAACCACGAGTGCAACTAGGCGAACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCCCAAGAAGGATACGAGTCACTCGTTGAGCTAGTCGTTGCAGGGCCAACGACACGAGGACATACTGCACAACGTTCTCCTTCCAAGAAACCCAAGGCGAAGGG
CACGACTTCTAAACATATGACGGAAGCACGCCTAGCCAACTTGGAAGATAATATGGAAAATGTGCAAGCCATGATCAGTAGGCTAAGTGAAAACTACGAGGGGTTAATCC
AAGAAAATGCCAAGATCAGCGCTGTTGTAAAAGACATGATCAAGGAGATCAAGTTGTCATTCGATAGAGATTTCAACACTCTATCAAGCGAAGCGTCGACTAGTGGCATG
ACGAGCACACAAGAACTTGTGCAAGGGCAAGTTACACCCGACTTGATAGTGCCAAAGCTCAACACTTATGACGACACAAGGAATGCGATGATTGTGGAAAATTTTCTATT
CGACTTGGAGAGTTATTTCGAAGCCGTTGGAGTGCATAATGATGATGCACGCATTGGCCATGCTCCAACATACCTACGAGATGCAGTTCAATTATGGTGGCGTCGTAAAC
ATGCCGAACATGAGCGAGACCGGAGCCTTCTTCGAACGTGGGAACAATTCAAAGAAAGAAAGTCCCATGGAAAGGAAGGAGAAGTGTCGAAGTCAAAGAAAAATATGAGC
AAAGAGGAAGACGGGAACGCTAAAAATGAAGGGAAGCACAATCAAGAAGCAAACTCTTCCTCAAAATTGCCCAAAGAAAGAGGTTTACTATATGTAAAAGCTGCACTCAA
CAATGAAGACACCTTAGCGGTGCTAGACAGCGGCGCAACCTATAGCATCATTGACCCACAAGAGGCCAAACGGCTAGGCCTCAAGGTCACGAAGAAGGCCGACACCATGA
TGAAGGTGATTAACGGACGACCAACACTCAATGACGAATTGGCTTGGAATGTGAGGGCGAATATCGGAGGATGGCAAAGTTTTTATGGCGAAAAGAGAAGCAACTATGCG
AAGAAAATGTCAGACAAGGAACCACGAGTGCAACTAGGCGAACCTTAA
Protein sequenceShow/hide protein sequence
MTSQEGYESLVELVVAGPTTRGHTAQRSPSKKPKAKGTTSKHMTEARLANLEDNMENVQAMISRLSENYEGLIQENAKISAVVKDMIKEIKLSFDRDFNTLSSEASTSGM
TSTQELVQGQVTPDLIVPKLNTYDDTRNAMIVENFLFDLESYFEAVGVHNDDARIGHAPTYLRDAVQLWWRRKHAEHERDRSLLRTWEQFKERKSHGKEGEVSKSKKNMS
KEEDGNAKNEGKHNQEANSSSKLPKERGLLYVKAALNNEDTLAVLDSGATYSIIDPQEAKRLGLKVTKKADTMMKVINGRPTLNDELAWNVRANIGGWQSFYGEKRSNYA
KKMSDKEPRVQLGEP