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PI0022968 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022968
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:23942866..23943069
RNA-Seq ExpressionPI0022968
SyntenyPI0022968
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-2279.1Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATTA DDIHYIETSNEWSQWRDDLAEEMF++WELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-2279.1Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATTA DDIHYIETSNEWSQWRDDLAEEMF++WELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-2280.6Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATT  DDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-2279.1Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATTA DDIHYIETSNEWSQWRDDLAEEMF++WELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.7e-2280.6Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATT  DDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein1.9e-2279.1Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATTA DDIHYIETSNEWSQWRDDLAEEMF++WELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
A0A5A7UGH9 Retrotransposon protein1.9e-2279.1Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATTA DDIHYIETSNEWSQWRDDLAEEMF++WELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
A0A5A7VJX3 Retrotransposon protein8.3e-2380.6Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATT  DDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
A0A5D3BL48 Putative nuclease HARBI18.3e-2380.6Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATT  DDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
A0A5D3D9Z3 Retrotransposon protein1.9e-2279.1Show/hide
Query:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
        +ACCLLHNLINREMTN +I ++  + DST+ATTA DDIHYIETSNEWSQWRDDLAEEMF++WELRNQ
Subjt:  MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGTTGTCTACTGCACAACCTCATCAATAGGGAGATGACTAACGCTGAAATTCTGGAGGATTACTACAAGGGTGATTCGACATACGCCACAACTGCCAATGACGA
CATTCATTATATTGAGACCTCAAATGAATGGAGTCAGTGGCGGGATGATCTAGCCGAAGAAATGTTCAGCGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGTTGTCTACTGCACAACCTCATCAATAGGGAGATGACTAACGCTGAAATTCTGGAGGATTACTACAAGGGTGATTCGACATACGCCACAACTGCCAATGACGA
CATTCATTATATTGAGACCTCAAATGAATGGAGTCAGTGGCGGGATGATCTAGCCGAAGAAATGTTCAGCGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MACCLLHNLINREMTNAEILEDYYKGDSTYATTANDDIHYIETSNEWSQWRDDLAEEMFSDWELRNQ