; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022975 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022975
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr01:11270450..11271210
RNA-Seq ExpressionPI0022975
SyntenyPI0022975
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-5955.75Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG
        MA K+P CNI  +STID +IK +KR F A+AEM+GP CSGFGWNDE  CI+AE+ V         KGLLNKSF +YD+LSY+FGKDRATG RAE+FAD+G
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG

Query:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC
         N   G++AF+ D   D + S MYS GL+M PD++M T+  R SE +N SSGSKRKR G   +  DI+R A+E+ N+QL  IAEWP  Q Q   +  +E 
Subjt:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC

Query:  VQHLQNIPELSSRNRVRLMRIIMRSV
        VQ L+ IPEL+  +R RLMRI+MR+V
Subjt:  VQHLQNIPELSSRNRVRLMRIIMRSV

KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-5754.42Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG
        MA K+P  NI  +STID +IK +KR F A+AEM+GP CSGFGWNDE  CI+AE+ V         KGLLNKSF +YD+LSY+FGKDRATG RAE+FAD+G
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG

Query:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC
         N   G++A + D   D +   MYS GL+M PD++M T+  R SE +N SSGSKRKR G   +  DI+R A+E+ N+QL  IAEWP  Q Q   +  +E 
Subjt:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC

Query:  VQHLQNIPELSSRNRVRLMRIIMRSV
        V+HL+ IPEL+  +R RLMRI+MR+V
Subjt:  VQHLQNIPELSSRNRVRLMRIIMRSV

KAA0044843.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-5855.75Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG
        MA K+P CN   +STID +IK +KR F A+AEM GP CSGFGWNDE  CIIAE+ V         KGLLNKSF +YD+LSY+FGKDRATG RAE+FAD+G
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG

Query:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC
         N   G++AF+ DI  D +   MYS GL+M PD++M T+  R SE +N SSGSKRKR G   +  DI+R A+E+ N+QL  IAEW   QCQ   +  +E 
Subjt:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC

Query:  VQHLQNIPELSSRNRVRLMRIIMRSV
        V+ L+ IPEL+  +R RLMRIIMR+V
Subjt:  VQHLQNIPELSSRNRVRLMRIIMRSV

KAA0048362.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-5754.42Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG
        MA K+P  NI  +STID +IK +KR F A+AEM+GP CSGFGWNDE  CI+AE+ V         KGLLNKSF +YD+LSY+FGKDRATG RAE+FAD+G
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG

Query:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC
         N   G++A + D   D +   MYS GL+M PD++M T+  R SE +N SSGSKRKR G   +  DI+R A+E+ N+QL  IAEWP  Q Q   +  +E 
Subjt:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC

Query:  VQHLQNIPELSSRNRVRLMRIIMRSV
        V+HL+ IPEL+  +R RLMRI+MR+V
Subjt:  VQHLQNIPELSSRNRVRLMRIIMRSV

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]3.9e-6356.33Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERS-----VGQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFAD
        MA+KLP  NIQ SSTIDC +KSLK+T+ AIAEM+GP+CSGFGWN+EF CIIAER      +      KGLL+KSFPYYDDLSY+FGKDRATGAR+E F +
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERS-----VGQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFAD

Query:  VGFNVLRGF-EAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYG
        VG NV   F +      S+D +I  MYSQG+ M PDE+ G + G++SE +N SS SKRKR  +  E V++IR+ MEF N+QL+AIA+WPKE+   E E  
Subjt:  VGFNVLRGF-EAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYG

Query:  EECVQHLQNIPELSSRNRVRLMRIIMRSV
         + V+ LQ+IP+L S++R +LM+I+ RS+
Subjt:  EECVQHLQNIPELSSRNRVRLMRIIMRSV

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859531.9e-6356.33Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERS-----VGQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFAD
        MA+KLP  NIQ SSTIDC +KSLK+T+ AIAEM+GP+CSGFGWN+EF CIIAER      +      KGLL+KSFPYYDDLSY+FGKDRATGAR+E F +
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERS-----VGQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFAD

Query:  VGFNVLRGF-EAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYG
        VG NV   F +      S+D +I  MYSQG+ M PDE+ G + G++SE +N SS SKRKR  +  E V++IR+ MEF N+QL+AIA+WPKE+   E E  
Subjt:  VGFNVLRGF-EAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYG

Query:  EECVQHLQNIPELSSRNRVRLMRIIMRSV
         + V+ LQ+IP+L S++R +LM+I+ RS+
Subjt:  EECVQHLQNIPELSSRNRVRLMRIIMRSV

A0A5A7SWD8 Retrotransposon protein7.5e-6055.75Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG
        MA K+P CNI  +STID +IK +KR F A+AEM+GP CSGFGWNDE  CI+AE+ V         KGLLNKSF +YD+LSY+FGKDRATG RAE+FAD+G
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG

Query:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC
         N   G++AF+ D   D + S MYS GL+M PD++M T+  R SE +N SSGSKRKR G   +  DI+R A+E+ N+QL  IAEWP  Q Q   +  +E 
Subjt:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC

Query:  VQHLQNIPELSSRNRVRLMRIIMRSV
        VQ L+ IPEL+  +R RLMRI+MR+V
Subjt:  VQHLQNIPELSSRNRVRLMRIIMRSV

A0A5A7TMW5 Retrotransposon protein4.8e-5955.75Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG
        MA K+P CN   +STID +IK +KR F A+AEM GP CSGFGWNDE  CIIAE+ V         KGLLNKSF +YD+LSY+FGKDRATG RAE+FAD+G
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG

Query:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC
         N   G++AF+ DI  D +   MYS GL+M PD++M T+  R SE +N SSGSKRKR G   +  DI+R A+E+ N+QL  IAEW   QCQ   +  +E 
Subjt:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC

Query:  VQHLQNIPELSSRNRVRLMRIIMRSV
        V+ L+ IPEL+  +R RLMRIIMR+V
Subjt:  VQHLQNIPELSSRNRVRLMRIIMRSV

A0A5A7U0H7 Retrotransposon protein1.9e-6356.33Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERS-----VGQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFAD
        MA+KLP  NIQ SSTIDC +KSLK+T+ AIAEM+GP+CSGFGWN+EF CIIAER      +      KGLL+KSFPYYDDLSY+FGKDRATGAR+E F +
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERS-----VGQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFAD

Query:  VGFNVLRGF-EAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYG
        VG NV   F +      S+D +I  MYSQG+ M PDE+ G + G++SE +N SS SKRKR  +  E V++IR+ MEF N+QL+AIA+WPKE+   E E  
Subjt:  VGFNVLRGF-EAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYG

Query:  EECVQHLQNIPELSSRNRVRLMRIIMRSV
         + V+ LQ+IP+L S++R +LM+I+ RS+
Subjt:  EECVQHLQNIPELSSRNRVRLMRIIMRSV

A0A5D3DPR5 Retrotransposon protein5.3e-5854.42Show/hide
Query:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG
        MA K+P  NI  +STID +IK +KR F A+AEM+GP CSGFGWNDE  CI+AE+ V         KGLLNKSF +YD+LSY+FGKDRATG RAE+FAD+G
Subjt:  MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSV---GQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVG

Query:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC
         N   G++A + D   D +   MYS GL+M PD++M T+  R SE +N SSGSKRKR G   +  DI+R A+E+ N+QL  IAEWP  Q Q   +  +E 
Subjt:  FNVLRGFEAFSTDISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEEC

Query:  VQHLQNIPELSSRNRVRLMRIIMRSV
        V+HL+ IPEL+  +R RLMRI+MR+V
Subjt:  VQHLQNIPELSSRNRVRLMRIIMRSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAAGCTGCCCAGCTGCAACATTCAAGGATCTTCGACAATAGACTGTCAGATTAAATCGCTCAAGAGAACGTTCCAGGCCATTGCAGAAATGCAAGGCCCAAC
TTGCAGTGGGTTTGGGTGGAATGACGAATTTCACTGCATCATTGCTGAACGATCCGTAGGACAGTTGGGTGAAGTGAAAGGCCTCCTCAACAAATCCTTTCCATATTACG
ATGACTTGTCCTACATTTTCGGGAAGGATCGGGCCACAGGAGCACGTGCAGAGAACTTCGCCGATGTGGGGTTCAATGTCCTAAGGGGGTTCGAGGCATTTTCCACTGAC
ATAAGTAATGATCCGGAGATCTCCATGATGTATAGCCAGGGCCTGGACATGTTGCCTGATGAGGTTATGGGGACACAACTGGGTCGATCTAGTGAAGGAAAGAATACTTC
TAGCGGAAGCAAAAGGAAAAGGGATGGACAAATGGCTGAAATTGTCGACATCATTCGCAATGCCATGGAATTTGTGAATGACCAACTGCAGGCCATTGCAGAATGGCCTA
AAGAGCAATGTCAAGCGGAGGACGAGTACGGTGAAGAATGTGTCCAACATTTGCAAAATATCCCGGAACTGAGTAGCCGCAATAGGGTGCGACTAATGAGGATCATAATG
CGTAGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAAGCTGCCCAGCTGCAACATTCAAGGATCTTCGACAATAGACTGTCAGATTAAATCGCTCAAGAGAACGTTCCAGGCCATTGCAGAAATGCAAGGCCCAAC
TTGCAGTGGGTTTGGGTGGAATGACGAATTTCACTGCATCATTGCTGAACGATCCGTAGGACAGTTGGGTGAAGTGAAAGGCCTCCTCAACAAATCCTTTCCATATTACG
ATGACTTGTCCTACATTTTCGGGAAGGATCGGGCCACAGGAGCACGTGCAGAGAACTTCGCCGATGTGGGGTTCAATGTCCTAAGGGGGTTCGAGGCATTTTCCACTGAC
ATAAGTAATGATCCGGAGATCTCCATGATGTATAGCCAGGGCCTGGACATGTTGCCTGATGAGGTTATGGGGACACAACTGGGTCGATCTAGTGAAGGAAAGAATACTTC
TAGCGGAAGCAAAAGGAAAAGGGATGGACAAATGGCTGAAATTGTCGACATCATTCGCAATGCCATGGAATTTGTGAATGACCAACTGCAGGCCATTGCAGAATGGCCTA
AAGAGCAATGTCAAGCGGAGGACGAGTACGGTGAAGAATGTGTCCAACATTTGCAAAATATCCCGGAACTGAGTAGCCGCAATAGGGTGCGACTAATGAGGATCATAATG
CGTAGTGTCTAG
Protein sequenceShow/hide protein sequence
MAKKLPSCNIQGSSTIDCQIKSLKRTFQAIAEMQGPTCSGFGWNDEFHCIIAERSVGQLGEVKGLLNKSFPYYDDLSYIFGKDRATGARAENFADVGFNVLRGFEAFSTD
ISNDPEISMMYSQGLDMLPDEVMGTQLGRSSEGKNTSSGSKRKRDGQMAEIVDIIRNAMEFVNDQLQAIAEWPKEQCQAEDEYGEECVQHLQNIPELSSRNRVRLMRIIM
RSV